RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 LINC01356Q8N9X3 169 aa9.29□□□□□ -0.92
LIG1-201ENST00000263274 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
LIG1-201ENST00000263274 IGHV3-33P01772 117 aa9.29□□□□□ -0.92
LIG1-201ENST00000263274 C15orf53Q8NAA6 179 aa9.29□□□□□ -0.92
LIG1-201ENST00000263274 CFHR3Q02985 330 aa9.28□□□□□ -0.92
LIG1-201ENST00000263274 NSUN5P1Q3KNT7 163 aa9.28□□□□□ -0.92
LIG1-201ENST00000263274 UNC79Q9P2D8 2635 aa9.28□□□□□ -0.92
LIG1-201ENST00000263274 MXRA5Q9NR99 2828 aa9.28□□□□□ -0.92
LIG1-201ENST00000263274 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
LIG1-201ENST00000263274 J3QKU1 62 aa9.28□□□□□ -0.92
LIG1-201ENST00000263274 TMEM61Q8N0U2 210 aa9.28□□□□□ -0.92
LIG1-201ENST00000263274 POM121L12Q8N7R1 296 aa9.27□□□□□ -0.92
LIG1-201ENST00000263274 FBN2P35556 2912 aa9.27□□□□□ -0.92
LIG1-201ENST00000263274 Q6ZSN1 163 aa9.27□□□□□ -0.93
LIG1-201ENST00000263274 TRAV8-4A0A0B4J246 113 aa9.27□□□□□ -0.93
LIG1-201ENST00000263274 IGKV3OR2-268A0A0C4DH90 116 aa9.27□□□□□ -0.93
LIG1-201ENST00000263274 NF1P21359 2839 aa9.27□□□□□ -0.93
LIG1-201ENST00000263274 HIVEP2P31629 2446 aa9.26□□□□□ -0.93
LIG1-201ENST00000263274 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.26□□□□□ -0.93
LIG1-201ENST00000263274 ELANEP08246 267 aa9.26□□□□□ -0.93
LIG1-201ENST00000263274 AMELXQ99217 191 aa9.26□□□□□ -0.93
LIG1-201ENST00000263274 TEP1Q99973 2627 aaKnown RBP9.26□□□□□ -0.93
LIG1-201ENST00000263274 TRAV13-1A0A0B4J241 112 aa9.26□□□□□ -0.93
LIG1-201ENST00000263274 M0R2P5 195 aa9.26□□□□□ -0.93
LIG1-201ENST00000263274 CHCHD5Q9BSY4 110 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 TRGV1A0A0A0MS02 117 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 COX6CP09669 75 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 ZNF415Q09FC8 603 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 ATXN8Q156A1 80 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 TMEM263Q8WUH6 116 aaKnown RBP9.25□□□□□ -0.93
LIG1-201ENST00000263274 CLEC2BQ92478 149 aa9.25□□□□□ -0.93
LIG1-201ENST00000263274 H3BMM0 161 aa9.24□□□□□ -0.93
LIG1-201ENST00000263274 LINC01620Q4KN68 170 aa9.24□□□□□ -0.93
LIG1-201ENST00000263274 C2orf82Q6UX34 121 aa9.24□□□□□ -0.93
LIG1-201ENST00000263274 LINC00467Q9BRT7 94 aa9.24□□□□□ -0.93
LIG1-201ENST00000263274 SMIM9A6NGZ8 99 aa9.24□□□□□ -0.93
LIG1-201ENST00000263274 LOC107984640A0A0U1RRK4 108 aa9.23□□□□□ -0.93
LIG1-201ENST00000263274 TRIAP1O43715 76 aa9.23□□□□□ -0.93
LIG1-201ENST00000263274 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
LIG1-201ENST00000263274 PLA2G2AP14555 144 aa9.23□□□□□ -0.93
LIG1-201ENST00000263274 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
LIG1-201ENST00000263274 CDKN2A-AS1Q9UH64 79 aa9.23□□□□□ -0.93
LIG1-201ENST00000263274 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
LIG1-201ENST00000263274 RBMY1BA6NDE4 496 aaKnown RBP9.22□□□□□ -0.93
LIG1-201ENST00000263274 RBMY1EA6NEQ0 496 aaKnown RBP9.22□□□□□ -0.93
LIG1-201ENST00000263274 RBMY1DP0C7P1 496 aaKnown RBP9.22□□□□□ -0.93
LIG1-201ENST00000263274 NDUFA7O95182 113 aa9.22□□□□□ -0.93
LIG1-201ENST00000263274 ZNF702PQ9H963 129 aa9.21□□□□□ -0.93
LIG1-201ENST00000263274 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.94
LIG1-201ENST00000263274 PEMTQ9UBM1 199 aa9.21□□□□□ -0.94
LIG1-201ENST00000263274 STHQ8IWL8 128 aa9.21□□□□□ -0.94
LIG1-201ENST00000263274 APCP25054 2843 aa9.21□□□□□ -0.94
LIG1-201ENST00000263274 A0A0B4J2C4 111 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 NBPF19A0A087WUL8 3843 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 ITPR3Q14573 2671 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 ICOSQ9Y6W8 199 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 MAST4O15021 2626 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 F5H768 121 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 DSCR9P59020 149 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 CIRBPQ14011 172 aaKnown RBP9.2□□□□□ -0.94
LIG1-201ENST00000263274 Q9H8V8 135 aa9.2□□□□□ -0.94
LIG1-201ENST00000263274 VSIG2Q96IQ7 327 aa9.19□□□□□ -0.94
LIG1-201ENST00000263274 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
LIG1-201ENST00000263274 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
LIG1-201ENST00000263274 INSP01308 110 aa9.19□□□□□ -0.94
LIG1-201ENST00000263274 MRPS36P82909 103 aaKnown RBP9.19□□□□□ -0.94
LIG1-201ENST00000263274 UBE2D4Q9Y2X8 147 aa9.19□□□□□ -0.94
LIG1-201ENST00000263274 UBE2WQ96B02 151 aa9.18□□□□□ -0.94
LIG1-201ENST00000263274 CHCHD7Q9BUK0 85 aa9.18□□□□□ -0.94
LIG1-201ENST00000263274 KRTAP10-9P60411 292 aa9.17□□□□□ -0.94
LIG1-201ENST00000263274 COX6A2Q02221 97 aa9.17□□□□□ -0.94
LIG1-201ENST00000263274 Q6YL49 198 aa9.17□□□□□ -0.94
LIG1-201ENST00000263274 PRIMA1Q86XR5 153 aa9.17□□□□□ -0.94
LIG1-201ENST00000263274 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
LIG1-201ENST00000263274 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
LIG1-201ENST00000263274 FLNAP21333 2647 aaKnown RBP9.16□□□□□ -0.94
LIG1-201ENST00000263274 TMEM89A2RUT3 159 aa9.16□□□□□ -0.94
LIG1-201ENST00000263274 MIAQ16674 131 aa9.16□□□□□ -0.94
LIG1-201ENST00000263274 C9orf153Q5TBE3 101 aa9.16□□□□□ -0.94
LIG1-201ENST00000263274 TINCRA0A1B0GVN0 87 aa9.16□□□□□ -0.94
LIG1-201ENST00000263274 WIPF1O43516 503 aa9.16□□□□□ -0.94
LIG1-201ENST00000263274 TRBV10-2A0A0K0K1G8 114 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 FAM236AA0A1B0GUQ0 79 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 FAM236BA0A1B0GV22 79 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
LIG1-201ENST00000263274 SBSPONQ8IVN8 264 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 TMEM101Q96IK0 257 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 Q96MF0 132 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 UBE2L6O14933 153 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 Q6ZTI0 123 aa9.15□□□□□ -0.94
LIG1-201ENST00000263274 RPL36AP83881 106 aaKnown RBP9.15□□□□□ -0.95
LIG1-201ENST00000263274 RPL36ALQ969Q0 106 aaKnown RBP9.15□□□□□ -0.95
LIG1-201ENST00000263274 J3QLI3 93 aa9.14□□□□□ -0.95
LIG1-201ENST00000263274 FAM104AQ969W3 186 aa9.14□□□□□ -0.95
LIG1-201ENST00000263274 NOP10Q9NPE3 64 aaKnown RBP9.14□□□□□ -0.95
LIG1-201ENST00000263274 IGHV4-31P0DP07 118 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms