RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ODF3Q96PU9 254 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 LITAFQ99732 161 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 MAP6D1Q9H9H5 199 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 UBE2D4Q9Y2X8 147 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 IGHV1-58A0A0C4DH39 117 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 CRLF1O75462 422 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 LINC01620Q4KN68 170 aa6.61□□□□□ -1.35
MSH4-201ENST00000263187 VSIG2Q96IQ7 327 aa6.6□□□□□ -1.35
MSH4-201ENST00000263187 WFDC10AQ9H1F0 79 aa6.6□□□□□ -1.35
MSH4-201ENST00000263187 MRPS36P82909 103 aaKnown RBP6.6□□□□□ -1.35
MSH4-201ENST00000263187 ZNF415Q09FC8 603 aa6.6□□□□□ -1.35
MSH4-201ENST00000263187 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
MSH4-201ENST00000263187 Q6YL49 198 aa6.6□□□□□ -1.35
MSH4-201ENST00000263187 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
MSH4-201ENST00000263187 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
MSH4-201ENST00000263187 RNF183Q96D59 192 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 IGHV4-31P0DP07 118 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 GAGE4Q13068 117 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 GAGE5Q13069 117 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 ATXN8Q156A1 80 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 C2orf82Q6UX34 121 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 Q9H8V8 135 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 ICOSQ9Y6W8 199 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.59□□□□□ -1.35
MSH4-201ENST00000263187 TMEM89A2RUT3 159 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 SCGB1A1P11684 91 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 Q6ZTI0 123 aa6.59□□□□□ -1.35
MSH4-201ENST00000263187 TRAV4A0A0B4J268 109 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 Q96MF0 132 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 HELZ2Q9BYK8 2649 aaKnown RBP6.58□□□□□ -1.36
MSH4-201ENST00000263187 A0A096LNT2 108 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 VWFP04275 2813 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 TTC32Q5I0X7 151 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 STHQ8IWL8 128 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 C11orf72Q8NBR9 251 aa6.58□□□□□ -1.36
MSH4-201ENST00000263187 RPL35AP18077 110 aaKnown RBP6.57□□□□□ -1.36
MSH4-201ENST00000263187 DEFB114Q30KQ6 69 aa6.57□□□□□ -1.36
MSH4-201ENST00000263187 LOC100131303A0A0U1RQF7 123 aa6.57□□□□□ -1.36
MSH4-201ENST00000263187 H7C423 109 aa6.57□□□□□ -1.36
MSH4-201ENST00000263187 INSP01308 110 aa6.57□□□□□ -1.36
MSH4-201ENST00000263187 MIAQ16674 131 aa6.57□□□□□ -1.36
MSH4-201ENST00000263187 ANAPC13Q9BS18 74 aa6.57□□□□□ -1.36
MSH4-201ENST00000263187 NOP10Q9NPE3 64 aaKnown RBP6.57□□□□□ -1.36
MSH4-201ENST00000263187 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
MSH4-201ENST00000263187 TINCRA0A1B0GVN0 87 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 ODF3L2Q3SX64 289 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 SBSPONQ8IVN8 264 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 TEX29Q8N6K0 151 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 PEMTQ9UBM1 199 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 TOMM7Q9P0U1 55 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 DSCR9P59020 149 aa6.56□□□□□ -1.36
MSH4-201ENST00000263187 TRAV8-4A0A0B4J246 113 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 SNCGO76070 127 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 PIK3CD-AS1Q5SR53 167 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 ZFAND6Q6FIF0 208 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 C1orf158Q8N1D5 194 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 Q8N2B8 174 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 CR1P17927 2039 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 GAGE7O76087 117 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 GAGE12FP0CL80 117 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 GAGE12GP0CL81 117 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 GAGE12IP0CL82 117 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 PRIMA1Q86XR5 153 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 UBE2WQ96B02 151 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 C11orf68Q9H3H3 251 aaKnown RBP6.55□□□□□ -1.36
MSH4-201ENST00000263187 SPANXA1Q9NS26 97 aa6.55□□□□□ -1.36
MSH4-201ENST00000263187 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
MSH4-201ENST00000263187 COX6CP09669 75 aa6.54□□□□□ -1.36
MSH4-201ENST00000263187 NTM-AS1Q6ZSK4 140 aa6.54□□□□□ -1.36
MSH4-201ENST00000263187 C15orf53Q8NAA6 179 aa6.54□□□□□ -1.36
MSH4-201ENST00000263187 TRBV30A0A0K0K1B3 111 aa6.54□□□□□ -1.36
MSH4-201ENST00000263187 CITED2Q99967 270 aaPredicted RBP6.54□□□□□ -1.36
MSH4-201ENST00000263187 TRGV2A0A075B6R0 118 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 J3QLI3 93 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 GAGE2BQ13066 116 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 GAGE2EQ4V326 116 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 C3orf56Q8N813 242 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 SS18L2Q9UHA2 77 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 FASNP49327 2511 aaKnown RBP6.53□□□□□ -1.36
MSH4-201ENST00000263187 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 HECTD1Q9ULT8 2610 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 PDZD2O15018 2839 aa6.53□□□□□ -1.36
MSH4-201ENST00000263187 B5MCH6 92 aa6.52□□□□□ -1.36
MSH4-201ENST00000263187 TMEM262E9PQX1 116 aa6.52□□□□□ -1.36
MSH4-201ENST00000263187 WFDC11Q8NEX6 87 aa6.52□□□□□ -1.36
MSH4-201ENST00000263187 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.36
MSH4-201ENST00000263187 RS1O15537 224 aa6.52□□□□□ -1.37
MSH4-201ENST00000263187 GAGE6Q13070 117 aa6.52□□□□□ -1.37
MSH4-201ENST00000263187 CIRBPQ14011 172 aaKnown RBP6.52□□□□□ -1.37
MSH4-201ENST00000263187 SPANXDQ9BXN6 97 aa6.52□□□□□ -1.37
MSH4-201ENST00000263187 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
MSH4-201ENST00000263187 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
MSH4-201ENST00000263187 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms