RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RBMY1EA6NEQ0 496 aaKnown RBP9.46□□□□□ -0.9
SNX1-201ENST00000261889 RBMY1DP0C7P1 496 aaKnown RBP9.46□□□□□ -0.9
SNX1-201ENST00000261889 DGAT2L7PQ6IED9 249 aa9.46□□□□□ -0.9
SNX1-201ENST00000261889 PDZD2O15018 2839 aa9.45□□□□□ -0.9
SNX1-201ENST00000261889 LINC00694P0DN24 101 aa9.45□□□□□ -0.9
SNX1-201ENST00000261889 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
SNX1-201ENST00000261889 LINC01587Q99440 93 aa9.45□□□□□ -0.9
SNX1-201ENST00000261889 CITED1Q99966 193 aa9.45□□□□□ -0.9
SNX1-201ENST00000261889 C11orf68Q9H3H3 251 aaKnown RBP9.45□□□□□ -0.9
SNX1-201ENST00000261889 Q9HAA7 133 aa9.45□□□□□ -0.9
SNX1-201ENST00000261889 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
SNX1-201ENST00000261889 Q9H8V8 135 aa9.44□□□□□ -0.9
SNX1-201ENST00000261889 IGLV1-40P01703 118 aa9.44□□□□□ -0.9
SNX1-201ENST00000261889 SBSPONQ8IVN8 264 aa9.44□□□□□ -0.9
SNX1-201ENST00000261889 MSMBP08118 114 aa9.43□□□□□ -0.9
SNX1-201ENST00000261889 GAGE5Q13069 117 aa9.43□□□□□ -0.9
SNX1-201ENST00000261889 GAGE6Q13070 117 aa9.43□□□□□ -0.9
SNX1-201ENST00000261889 K7EQG2 157 aa9.43□□□□□ -0.9
SNX1-201ENST00000261889 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
SNX1-201ENST00000261889 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
SNX1-201ENST00000261889 TOMM7Q9P0U1 55 aa9.43□□□□□ -0.9
SNX1-201ENST00000261889 VWFP04275 2813 aa9.42□□□□□ -0.9
SNX1-201ENST00000261889 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
SNX1-201ENST00000261889 IFITM1P13164 125 aa9.42□□□□□ -0.9
SNX1-201ENST00000261889 TMEM61Q8N0U2 210 aa9.42□□□□□ -0.9
SNX1-201ENST00000261889 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
SNX1-201ENST00000261889 MEIG1Q5JSS6 88 aa9.42□□□□□ -0.9
SNX1-201ENST00000261889 TRGV11A0A075B6L2 103 aa9.41□□□□□ -0.9
SNX1-201ENST00000261889 A0A0B4J2C4 111 aa9.41□□□□□ -0.9
SNX1-201ENST00000261889 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
SNX1-201ENST00000261889 PSMB8P28062 276 aa9.41□□□□□ -0.9
SNX1-201ENST00000261889 VSIG2Q96IQ7 327 aa9.41□□□□□ -0.9
SNX1-201ENST00000261889 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
SNX1-201ENST00000261889 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
SNX1-201ENST00000261889 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.4□□□□□ -0.9
SNX1-201ENST00000261889 C10orf105Q8TEF2 133 aa9.4□□□□□ -0.9
SNX1-201ENST00000261889 RHOHQ15669 191 aa9.4□□□□□ -0.9
SNX1-201ENST00000261889 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
SNX1-201ENST00000261889 TRGV1A0A0A0MS02 117 aa9.4□□□□□ -0.91
SNX1-201ENST00000261889 TMEM101Q96IK0 257 aa9.4□□□□□ -0.91
SNX1-201ENST00000261889 UBE2D4Q9Y2X8 147 aa9.4□□□□□ -0.91
SNX1-201ENST00000261889 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
SNX1-201ENST00000261889 GAGE7O76087 117 aa9.39□□□□□ -0.91
SNX1-201ENST00000261889 GAGE12FP0CL80 117 aa9.39□□□□□ -0.91
SNX1-201ENST00000261889 GAGE12GP0CL81 117 aa9.39□□□□□ -0.91
SNX1-201ENST00000261889 GAGE12IP0CL82 117 aa9.39□□□□□ -0.91
SNX1-201ENST00000261889 GAGE4Q13068 117 aa9.39□□□□□ -0.91
SNX1-201ENST00000261889 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
SNX1-201ENST00000261889 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
SNX1-201ENST00000261889 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
SNX1-201ENST00000261889 HERV-K104P63124 156 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 MIAQ16674 131 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 KLK5Q9Y337 293 aaPredicted RBP9.38□□□□□ -0.91
SNX1-201ENST00000261889 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 A0A096LNT2 108 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 FAM236AA0A1B0GUQ0 79 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 FAM236BA0A1B0GV22 79 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 COX6CP09669 75 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 KRTAP10-9P60411 292 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 MRPS36P82909 103 aaKnown RBP9.38□□□□□ -0.91
SNX1-201ENST00000261889 SHISA2Q6UWI4 295 aa9.38□□□□□ -0.91
SNX1-201ENST00000261889 KLK9Q2XQG4 91 aa9.37□□□□□ -0.91
SNX1-201ENST00000261889 PRIMA1Q86XR5 153 aa9.37□□□□□ -0.91
SNX1-201ENST00000261889 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
SNX1-201ENST00000261889 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
SNX1-201ENST00000261889 TRBV30A0A0K0K1B3 111 aa9.36□□□□□ -0.91
SNX1-201ENST00000261889 LRRC75A-AS1Q8N1F1 130 aa9.36□□□□□ -0.91
SNX1-201ENST00000261889 ATP5G1P05496 136 aa9.35□□□□□ -0.91
SNX1-201ENST00000261889 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
SNX1-201ENST00000261889 Q6ZTI0 123 aa9.35□□□□□ -0.91
SNX1-201ENST00000261889 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
SNX1-201ENST00000261889 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
SNX1-201ENST00000261889 GAGE2AQ6NT46 116 aa9.34□□□□□ -0.91
SNX1-201ENST00000261889 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
SNX1-201ENST00000261889 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
SNX1-201ENST00000261889 LST1O00453 97 aa9.33□□□□□ -0.92
SNX1-201ENST00000261889 SLPIP03973 132 aa9.33□□□□□ -0.92
SNX1-201ENST00000261889 B4DSR2 109 aa9.33□□□□□ -0.92
SNX1-201ENST00000261889 PFN2P35080 140 aa9.33□□□□□ -0.92
SNX1-201ENST00000261889 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
SNX1-201ENST00000261889 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
SNX1-201ENST00000261889 DYNLRB2Q8TF09 96 aa9.33□□□□□ -0.92
SNX1-201ENST00000261889 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
SNX1-201ENST00000261889 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
SNX1-201ENST00000261889 ANK3Q12955 4377 aaKnown RBP9.32□□□□□ -0.92
SNX1-201ENST00000261889 K7EMT4 169 aa9.32□□□□□ -0.92
SNX1-201ENST00000261889 CR1P17927 2039 aa9.32□□□□□ -0.92
SNX1-201ENST00000261889 A0A096LPF7 62 aa9.32□□□□□ -0.92
SNX1-201ENST00000261889 Q96MF0 132 aa9.32□□□□□ -0.92
SNX1-201ENST00000261889 TRBV7-9A0A0J9YWB2 115 aa9.3□□□□□ -0.92
SNX1-201ENST00000261889 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
SNX1-201ENST00000261889 NTM-AS1Q6ZSK4 140 aa9.3□□□□□ -0.92
SNX1-201ENST00000261889 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
SNX1-201ENST00000261889 RNASE1P07998 156 aaKnown RBP9.3□□□□□ -0.92
SNX1-201ENST00000261889 HIST2H2BCQ6DN03 193 aa9.3□□□□□ -0.92
SNX1-201ENST00000261889 MAP6D1Q9H9H5 199 aa9.3□□□□□ -0.92
SNX1-201ENST00000261889 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
SNX1-201ENST00000261889 IGKV3D-7A0A0C4DH55 119 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms