RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 LINC00467Q9BRT7 94 aa9.43□□□□□ -0.9
THSD1-201ENST00000258613 C19orf73Q9NVV2 129 aa9.43□□□□□ -0.9
THSD1-201ENST00000258613 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 TMEM141Q96I45 108 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 TRBV20-1A0A075B6N2 111 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 VCX2Q9H322 139 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 PKD1L1Q8TDX9 2849 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 TRAV25A0A0B4J276 109 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 APOMO95445 188 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 CHCHD7Q9BUK0 85 aa9.42□□□□□ -0.9
THSD1-201ENST00000258613 TRAV8-3A0A0A6YYJ7 113 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 NDUFA7O95182 113 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 RHOHQ15669 191 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 A0A1B0GWB2 263 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 GAGE7O76087 117 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 GAGE12FP0CL80 117 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 GAGE12GP0CL81 117 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 GAGE12IP0CL82 117 aa9.41□□□□□ -0.9
THSD1-201ENST00000258613 TRBV7-3A0A075B6L6 115 aa9.4□□□□□ -0.9
THSD1-201ENST00000258613 FOXI1Q12951 378 aa9.4□□□□□ -0.9
THSD1-201ENST00000258613 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
THSD1-201ENST00000258613 PF4P02776 101 aa9.4□□□□□ -0.9
THSD1-201ENST00000258613 GAGE4Q13068 117 aa9.4□□□□□ -0.9
THSD1-201ENST00000258613 GAGE13Q4V321 117 aa9.4□□□□□ -0.9
THSD1-201ENST00000258613 PRO0461Q9UI25 63 aa9.4□□□□□ -0.9
THSD1-201ENST00000258613 RS1O15537 224 aa9.39□□□□□ -0.91
THSD1-201ENST00000258613 LINC00694P0DN24 101 aa9.39□□□□□ -0.91
THSD1-201ENST00000258613 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
THSD1-201ENST00000258613 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
THSD1-201ENST00000258613 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
THSD1-201ENST00000258613 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
THSD1-201ENST00000258613 C12orf74Q32Q52 190 aa9.39□□□□□ -0.91
THSD1-201ENST00000258613 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
THSD1-201ENST00000258613 MAST4O15021 2626 aa9.38□□□□□ -0.91
THSD1-201ENST00000258613 LINC00482Q8N8I6 264 aa9.38□□□□□ -0.91
THSD1-201ENST00000258613 SLC25A29Q8N8R3 303 aa9.38□□□□□ -0.91
THSD1-201ENST00000258613 CSDC2Q9Y534 153 aaKnown RBP9.38□□□□□ -0.91
THSD1-201ENST00000258613 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
THSD1-201ENST00000258613 J3QQQ9 107 aa9.38□□□□□ -0.91
THSD1-201ENST00000258613 C3orf56Q8N813 242 aa9.38□□□□□ -0.91
THSD1-201ENST00000258613 RHODO00212 210 aa9.37□□□□□ -0.91
THSD1-201ENST00000258613 AMELXQ99217 191 aa9.37□□□□□ -0.91
THSD1-201ENST00000258613 UBE2D4Q9Y2X8 147 aa9.37□□□□□ -0.91
THSD1-201ENST00000258613 TRGV2A0A075B6R0 118 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 A0A0J9YY99 117 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 C5orf47Q569G3 176 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
THSD1-201ENST00000258613 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 HERVK_113P61574 105 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 NTM-AS1Q6ZSK4 140 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.36□□□□□ -0.91
THSD1-201ENST00000258613 CSNK1G2-AS1Q8NCQ2 148 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 IL17DQ8TAD2 202 aa9.36□□□□□ -0.91
THSD1-201ENST00000258613 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
THSD1-201ENST00000258613 IGLL5B9A064 214 aa9.35□□□□□ -0.91
THSD1-201ENST00000258613 DEFB4AO15263 64 aa9.35□□□□□ -0.91
THSD1-201ENST00000258613 LGALS3P17931 250 aaKnown RBP9.35□□□□□ -0.91
THSD1-201ENST00000258613 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
THSD1-201ENST00000258613 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
THSD1-201ENST00000258613 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
THSD1-201ENST00000258613 PAPPA-AS1Q5QFB9 102 aa9.34□□□□□ -0.91
THSD1-201ENST00000258613 PTH2Q96A98 100 aa9.34□□□□□ -0.91
THSD1-201ENST00000258613 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.91
THSD1-201ENST00000258613 NPC2P61916 151 aa9.33□□□□□ -0.92
THSD1-201ENST00000258613 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
THSD1-201ENST00000258613 SMCPP49901 116 aaPredicted RBP9.33□□□□□ -0.92
THSD1-201ENST00000258613 COX6A2Q02221 97 aa9.33□□□□□ -0.92
THSD1-201ENST00000258613 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
THSD1-201ENST00000258613 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
THSD1-201ENST00000258613 IGHV3-30-3P0DP02 117 aa9.33□□□□□ -0.92
THSD1-201ENST00000258613 DGAT2L7PQ6IED9 249 aa9.33□□□□□ -0.92
THSD1-201ENST00000258613 LINC01549A6NIU2 74 aa9.32□□□□□ -0.92
THSD1-201ENST00000258613 K7EQD1 137 aa9.32□□□□□ -0.92
THSD1-201ENST00000258613 CRLF1O75462 422 aa9.32□□□□□ -0.92
THSD1-201ENST00000258613 TRAV13-1A0A0B4J241 112 aa9.32□□□□□ -0.92
THSD1-201ENST00000258613 CDKN2A-AS1Q9UH64 79 aa9.32□□□□□ -0.92
THSD1-201ENST00000258613 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
THSD1-201ENST00000258613 PIK3CD-AS1Q5SR53 167 aa9.31□□□□□ -0.92
THSD1-201ENST00000258613 PYGO1Q9Y3Y4 419 aa9.31□□□□□ -0.92
THSD1-201ENST00000258613 TAL2Q16559 108 aa9.31□□□□□ -0.92
THSD1-201ENST00000258613 NDUFA11Q86Y39 141 aa9.31□□□□□ -0.92
THSD1-201ENST00000258613 MRPS36P82909 103 aaKnown RBP9.3□□□□□ -0.92
THSD1-201ENST00000258613 LEPROTO15243 131 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
THSD1-201ENST00000258613 DAND5Q8N907 189 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
THSD1-201ENST00000258613 CARD19Q96LW7 228 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 COL6A5A8TX70 2615 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 A0A0U1RRA0 63 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 H7C2G1 150 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 IGHV3-30P01768 117 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 IGHV3-30-5P0DP03 117 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 MEIG1Q5JSS6 88 aa9.3□□□□□ -0.92
THSD1-201ENST00000258613 ZNF625Q96I27 306 aaPredicted RBP9.3□□□□□ -0.92
THSD1-201ENST00000258613 A0A096LPF7 62 aa9.29□□□□□ -0.92
THSD1-201ENST00000258613 TRGV4A0A0C4DH28 118 aa9.29□□□□□ -0.92
THSD1-201ENST00000258613 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms