RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
VPS50-201ENST00000251739 hDV102S1A0JD36 115 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 C5orf52A6NGY3 159 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 MGPP08493 103 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 CTRLP40313 264 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 RASL11AQ6T310 242 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 OR2D3Q8NGH3 330 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 RNF185Q96GF1 192 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 CNFNQ9BYD5 112 aa6.54□□□□□ -1.36
VPS50-201ENST00000251739 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 KANTRA0A1W2PQU2 76 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 F2Z2F3 143 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 CHTF8P0CG12 524 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 Q6ZRU5 148 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 TPPP3Q9BW30 176 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 PLAC8Q9NZF1 115 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 GNG13Q9P2W3 67 aa6.53□□□□□ -1.36
VPS50-201ENST00000251739 A0A087WYN8 130 aa6.52□□□□□ -1.37
VPS50-201ENST00000251739 A0A1B0GV90 55 aa6.52□□□□□ -1.37
VPS50-201ENST00000251739 TRGC1P0CF51 173 aa6.52□□□□□ -1.37
VPS50-201ENST00000251739 MEF2BQ02080 365 aaPredicted RBP6.52□□□□□ -1.37
VPS50-201ENST00000251739 WDR73Q6P4I2 378 aa6.52□□□□□ -1.37
VPS50-201ENST00000251739 LYZL1Q6UWQ5 148 aa6.52□□□□□ -1.37
VPS50-201ENST00000251739 DPH3P1Q9H4G8 78 aa6.52□□□□□ -1.37
VPS50-201ENST00000251739 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.51□□□□□ -1.37
VPS50-201ENST00000251739 B5MCH6 92 aa6.51□□□□□ -1.37
VPS50-201ENST00000251739 MT-ND4LP03901 98 aa6.51□□□□□ -1.37
VPS50-201ENST00000251739 DDTP30046 118 aa6.51□□□□□ -1.37
VPS50-201ENST00000251739 GNG4P50150 75 aa6.51□□□□□ -1.37
VPS50-201ENST00000251739 ODF1Q14990 250 aa6.51□□□□□ -1.37
VPS50-201ENST00000251739 PEA15Q15121 130 aa6.51□□□□□ -1.37
VPS50-201ENST00000251739 C14orf144Q96I85 54 aa6.51□□□□□ -1.37
VPS50-201ENST00000251739 XKRY2A2RUG3 117 aa6.5□□□□□ -1.37
VPS50-201ENST00000251739 PDE6DO43924 150 aa6.5□□□□□ -1.37
VPS50-201ENST00000251739 IFNA1P01562 189 aa6.5□□□□□ -1.37
VPS50-201ENST00000251739 NTF3P20783 257 aa6.5□□□□□ -1.37
VPS50-201ENST00000251739 AMTP48728 403 aa6.5□□□□□ -1.37
VPS50-201ENST00000251739 GVQW2A0A096LPI5 108 aaPredicted RBP6.49□□□□□ -1.37
VPS50-201ENST00000251739 BCL2P10415 239 aa6.49□□□□□ -1.37
VPS50-201ENST00000251739 SULT1A2P50226 295 aa6.49□□□□□ -1.37
VPS50-201ENST00000251739 SNRPEP62304 92 aaKnown RBP6.49□□□□□ -1.37
VPS50-201ENST00000251739 GATD1Q8NB37 220 aa6.49□□□□□ -1.37
VPS50-201ENST00000251739 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
VPS50-201ENST00000251739 CARHSP1Q9Y2V2 147 aaKnown RBP6.49□□□□□ -1.37
VPS50-201ENST00000251739 GAGE12HA6NDE8 117 aa6.48□□□□□ -1.37
VPS50-201ENST00000251739 PHOX2AO14813 284 aa6.48□□□□□ -1.37
VPS50-201ENST00000251739 TRAV26-2A0A0B4J265 109 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 K7EN84 100 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 M0R143 59 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 UBE2L6O14933 153 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 NCR2O95944 276 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
VPS50-201ENST00000251739 COX6A2Q02221 97 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 PRSS3P2Q8NHM4 247 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 GTSF1Q8WW33 167 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 CHCHD10Q8WYQ3 142 aaPredicted RBP6.47□□□□□ -1.37
VPS50-201ENST00000251739 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
VPS50-201ENST00000251739 SEC11CQ9BY50 192 aa6.47□□□□□ -1.37
VPS50-201ENST00000251739 RPP21Q9H633 154 aaKnown RBP6.47□□□□□ -1.37
VPS50-201ENST00000251739 H7C423 109 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 DLEU1O43261 78 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 G0S2P27469 103 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 BLOC1S1P78537 153 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 PRR3P79522 188 aaKnown RBP6.46□□□□□ -1.38
VPS50-201ENST00000251739 FABP9Q0Z7S8 132 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 FOXI1Q12951 378 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 C10orf91Q5T1B1 145 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
VPS50-201ENST00000251739 RNASE7Q9H1E1 156 aaKnown RBP6.46□□□□□ -1.38
VPS50-201ENST00000251739 A0A096LNI7 61 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 FAM231BA6NCW3 169 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 SDHAF1A6NFY7 115 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 H0Y8G0 127 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 FGF6P10767 208 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
VPS50-201ENST00000251739 TWIST1Q15672 202 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 HIGD2BQ4VC39 106 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 FAM74A3Q4VXF1 159 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 PET117Q6UWS5 81 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 C7orf33Q8WU49 177 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 LINC01600Q96MT4 127 aa6.45□□□□□ -1.38
VPS50-201ENST00000251739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.44□□□□□ -1.38
VPS50-201ENST00000251739 IGKV3OR2-268A0A0C4DH90 116 aa6.44□□□□□ -1.38
VPS50-201ENST00000251739 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
VPS50-201ENST00000251739 IGKV2-29A2NJV5 120 aaPredicted RBP6.44□□□□□ -1.38
VPS50-201ENST00000251739 ESDP10768 282 aa6.44□□□□□ -1.38
VPS50-201ENST00000251739 ZNF25P17030 456 aaPredicted RBP6.44□□□□□ -1.38
VPS50-201ENST00000251739 TAGLN2P37802 199 aaKnown RBP6.44□□□□□ -1.38
VPS50-201ENST00000251739 OCC1Q8TAD7 63 aa6.44□□□□□ -1.38
VPS50-201ENST00000251739 IGKV2-24A0A0C4DH68 120 aa6.43□□□□□ -1.38
VPS50-201ENST00000251739 APCSP02743 223 aa6.43□□□□□ -1.38
VPS50-201ENST00000251739 AMMECR1LQ6DCA0 310 aa6.43□□□□□ -1.38
VPS50-201ENST00000251739 FAM231DQ6ZW35 169 aa6.43□□□□□ -1.38
VPS50-201ENST00000251739 STPG4Q8N801 248 aa6.43□□□□□ -1.38
VPS50-201ENST00000251739 OR5A1Q8NGJ0 315 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms