RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 LY6EQ16553 131 aa13.46□□□□□ -0.26
PTPN12-201ENST00000248594 ITLN2Q8WWU7 325 aaPredicted RBP13.46□□□□□ -0.26
PTPN12-201ENST00000248594 IGKV3OR2-268A0A0C4DH90 116 aa13.45□□□□□ -0.26
PTPN12-201ENST00000248594 RPL18AQ02543 176 aaKnown RBP13.45□□□□□ -0.26
PTPN12-201ENST00000248594 CRYGAP11844 174 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 PRIMA1Q86XR5 153 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 LY6DQ14210 128 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 DEFB121Q5J5C9 76 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 LINC00308Q8TCZ7 52 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 LENEPQ9Y5L5 61 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 TRAV23DV6A0A075B6W5 121 aa13.44□□□□□ -0.26
PTPN12-201ENST00000248594 SLPIP03973 132 aa13.43□□□□□ -0.26
PTPN12-201ENST00000248594 HILS1P60008 231 aa13.43□□□□□ -0.26
PTPN12-201ENST00000248594 SPANXDQ9BXN6 97 aa13.43□□□□□ -0.26
PTPN12-201ENST00000248594 SPANXCQ9NY87 97 aa13.43□□□□□ -0.26
PTPN12-201ENST00000248594 C9orf129Q5T035 196 aaKnown RBP13.43□□□□□ -0.26
PTPN12-201ENST00000248594 FAM223AQ8IWN6 122 aa13.43□□□□□ -0.26
PTPN12-201ENST00000248594 USP17L23D6RBM5 183 aa13.42□□□□□ -0.26
PTPN12-201ENST00000248594 TOMM7Q9P0U1 55 aa13.42□□□□□ -0.26
PTPN12-201ENST00000248594 A0A0J9YX75 114 aa13.41□□□□□ -0.26
PTPN12-201ENST00000248594 INAFM2P0DMQ5 153 aa13.41□□□□□ -0.26
PTPN12-201ENST00000248594 PIEZO1Q92508 2521 aa13.41□□□□□ -0.26
PTPN12-201ENST00000248594 MINOS1Q5TGZ0 78 aa13.41□□□□□ -0.26
PTPN12-201ENST00000248594 C20orf197Q8N268 126 aa13.41□□□□□ -0.26
PTPN12-201ENST00000248594 EPG5Q9HCE0 2579 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 FBN2P35556 2912 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 NCR3O14931 201 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 SAA4P35542 130 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 BRD3OSQ6XYD6 125 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 Q8NA96 180 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 J3QLI3 93 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 SERP2Q8N6R1 65 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 PYGO1Q9Y3Y4 419 aa13.4□□□□□ -0.26
PTPN12-201ENST00000248594 C5orf38Q86SI9 138 aa13.39□□□□□ -0.27
PTPN12-201ENST00000248594 LINC00846Q9NV44 126 aa13.39□□□□□ -0.27
PTPN12-201ENST00000248594 LRRK2Q5S007 2527 aa13.39□□□□□ -0.27
PTPN12-201ENST00000248594 MALP21145 153 aa13.39□□□□□ -0.27
PTPN12-201ENST00000248594 WFDC11Q8NEX6 87 aa13.39□□□□□ -0.27
PTPN12-201ENST00000248594 TMEM258P61165 79 aa13.39□□□□□ -0.27
PTPN12-201ENST00000248594 PRB1P04280 392 aa13.38□□□□□ -0.27
PTPN12-201ENST00000248594 SOSTDC1Q6X4U4 206 aa13.38□□□□□ -0.27
PTPN12-201ENST00000248594 ZFP36P26651 326 aaKnown RBP13.38□□□□□ -0.27
PTPN12-201ENST00000248594 UCNP55089 124 aa13.38□□□□□ -0.27
PTPN12-201ENST00000248594 FN1P02751 2386 aaKnown RBP13.38□□□□□ -0.27
PTPN12-201ENST00000248594 F8WDY8 70 aa13.37□□□□□ -0.27
PTPN12-201ENST00000248594 HIST2H2BDQ6DRA6 164 aa13.37□□□□□ -0.27
PTPN12-201ENST00000248594 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
PTPN12-201ENST00000248594 MRPS36P82909 103 aaKnown RBP13.37□□□□□ -0.27
PTPN12-201ENST00000248594 ODF3BA8MYP8 253 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 MED14OSP0DP75 135 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 A0A0U1RQV1 116 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 FAM223BA6NKX1 122 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 LINC00467Q9BRT7 94 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 TRBV6-5A0A0K0K1A5 114 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 COX6A2Q02221 97 aa13.36□□□□□ -0.27
PTPN12-201ENST00000248594 NIPBLQ6KC79 2804 aaeCLIP13.36□□□□□ -0.27
PTPN12-201ENST00000248594 Q8N6K4 173 aa13.35□□□□□ -0.27
PTPN12-201ENST00000248594 U3KQE9 123 aa13.35□□□□□ -0.27
PTPN12-201ENST00000248594 GHRHP01286 108 aa13.35□□□□□ -0.27
PTPN12-201ENST00000248594 FHL2Q14192 279 aa13.35□□□□□ -0.27
PTPN12-201ENST00000248594 CXCL5P42830 114 aa13.35□□□□□ -0.27
PTPN12-201ENST00000248594 SEC61GP60059 68 aa13.35□□□□□ -0.27
PTPN12-201ENST00000248594 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.35□□□□□ -0.27
PTPN12-201ENST00000248594 RPL35AP18077 110 aaKnown RBP13.34□□□□□ -0.27
PTPN12-201ENST00000248594 RPS28P62857 69 aaKnown RBP13.34□□□□□ -0.27
PTPN12-201ENST00000248594 MRAPQ8TCY5 172 aa13.34□□□□□ -0.27
PTPN12-201ENST00000248594 NF1P21359 2839 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 IGHV1OR15-1A0A075B7D0 117 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 CRPP02741 224 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 PFN2P35080 140 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 A0A087WYN8 130 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 LECT2O14960 151 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 IGHG2P01859 326 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 LINC01600Q96MT4 127 aa13.33□□□□□ -0.28
PTPN12-201ENST00000248594 MTORP42345 2549 aa13.32□□□□□ -0.28
PTPN12-201ENST00000248594 C11orf68Q9H3H3 251 aaKnown RBP13.32□□□□□ -0.28
PTPN12-201ENST00000248594 Q5XG85 94 aa13.32□□□□□ -0.28
PTPN12-201ENST00000248594 LINC01561Q8N1V8 128 aa13.32□□□□□ -0.28
PTPN12-201ENST00000248594 SOCS3O14543 225 aa13.31□□□□□ -0.28
PTPN12-201ENST00000248594 LINC00336Q6ZUF6 198 aa13.3□□□□□ -0.28
PTPN12-201ENST00000248594 FAM19A1Q7Z5A9 133 aa13.3□□□□□ -0.28
PTPN12-201ENST00000248594 KLLNB2CW77 178 aa13.29□□□□□ -0.28
PTPN12-201ENST00000248594 IGHV3OR16-12A0A075B7B8 117 aa13.29□□□□□ -0.28
PTPN12-201ENST00000248594 LINC00158P58513 81 aa13.29□□□□□ -0.28
PTPN12-201ENST00000248594 Q6ZSN1 163 aa13.29□□□□□ -0.28
PTPN12-201ENST00000248594 IGFL3Q6UXB1 125 aa13.28□□□□□ -0.28
PTPN12-201ENST00000248594 FAM104AQ969W3 186 aa13.28□□□□□ -0.28
PTPN12-201ENST00000248594 C22orf24Q9Y442 160 aa13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RBMY1BA6NDE4 496 aaKnown RBP13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RBMY1EA6NEQ0 496 aaKnown RBP13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RBMY1DP0C7P1 496 aaKnown RBP13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RBMY1A1P0DJD3 496 aaKnown RBP13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RBMY1CP0DJD4 496 aa13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RPL36AP83881 106 aaKnown RBP13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RBMY1FQ15415 496 aaKnown RBP13.28□□□□□ -0.28
PTPN12-201ENST00000248594 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
PTPN12-201ENST00000248594 RPL36ALQ969Q0 106 aaKnown RBP13.28□□□□□ -0.28
PTPN12-201ENST00000248594 NDUFA1O15239 70 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms