RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 TMEM170BQ5T4T1 132 aa16.47■□□□□ 0.23
SYNGR3-201ENST00000248121 ZNF25P17030 456 aaPredicted RBP16.47■□□□□ 0.23
SYNGR3-201ENST00000248121 Q6ZUT4 128 aa16.46■□□□□ 0.23
SYNGR3-201ENST00000248121 IGHV4-28A0A0C4DH34 117 aa16.45■□□□□ 0.22
SYNGR3-201ENST00000248121 MYMXA0A1B0GTQ4 84 aa16.45■□□□□ 0.22
SYNGR3-201ENST00000248121 LINC00694P0DN24 101 aa16.45■□□□□ 0.22
SYNGR3-201ENST00000248121 RNF183Q96D59 192 aa16.45■□□□□ 0.22
SYNGR3-201ENST00000248121 A8MZ25 164 aa16.44■□□□□ 0.22
SYNGR3-201ENST00000248121 ZNF22P17026 224 aaPredicted RBP16.44■□□□□ 0.22
SYNGR3-201ENST00000248121 SBSPONQ8IVN8 264 aa16.44■□□□□ 0.22
SYNGR3-201ENST00000248121 TAX1BP3O14907 124 aa16.43■□□□□ 0.22
SYNGR3-201ENST00000248121 TSPEAR-AS2P59090 65 aa16.43■□□□□ 0.22
SYNGR3-201ENST00000248121 Q8NAQ8 132 aa16.43■□□□□ 0.22
SYNGR3-201ENST00000248121 ORAOV1Q8WV07 137 aa16.43■□□□□ 0.22
SYNGR3-201ENST00000248121 HERVK_113P61574 105 aa16.42■□□□□ 0.22
SYNGR3-201ENST00000248121 MRPS36P82909 103 aaKnown RBP16.42■□□□□ 0.22
SYNGR3-201ENST00000248121 TIMM21Q9BVV7 248 aa16.42■□□□□ 0.22
SYNGR3-201ENST00000248121 TMEM223A0PJW6 202 aa16.42■□□□□ 0.22
SYNGR3-201ENST00000248121 SEC11AP67812 179 aa16.42■□□□□ 0.22
SYNGR3-201ENST00000248121 FAM222AQ5U5X8 452 aa16.41■□□□□ 0.22
SYNGR3-201ENST00000248121 COX11Q9Y6N1 276 aa16.41■□□□□ 0.22
SYNGR3-201ENST00000248121 GTSF1LQ9H1H1 148 aa16.4■□□□□ 0.22
SYNGR3-201ENST00000248121 ZNF815PA8K554 130 aa16.39■□□□□ 0.21
SYNGR3-201ENST00000248121 CELA1Q9UNI1 258 aa16.39■□□□□ 0.21
SYNGR3-201ENST00000248121 TENM3Q9P273 2699 aa16.39■□□□□ 0.21
SYNGR3-201ENST00000248121 K7EIL1 84 aa16.39■□□□□ 0.21
SYNGR3-201ENST00000248121 K7EP13 123 aa16.39■□□□□ 0.21
SYNGR3-201ENST00000248121 PLEKHB2Q96CS7 222 aa16.38■□□□□ 0.21
SYNGR3-201ENST00000248121 FXYD2P54710 66 aa16.38■□□□□ 0.21
SYNGR3-201ENST00000248121 LYRM9A8MSI8 78 aa16.37■□□□□ 0.21
SYNGR3-201ENST00000248121 GCSHP23434 173 aa16.36■□□□□ 0.21
SYNGR3-201ENST00000248121 UBE2D1P51668 147 aa16.36■□□□□ 0.21
SYNGR3-201ENST00000248121 CSDC2Q9Y534 153 aaKnown RBP16.36■□□□□ 0.21
SYNGR3-201ENST00000248121 MIFP14174 115 aa16.36■□□□□ 0.21
SYNGR3-201ENST00000248121 KPRPQ5T749 579 aaPredicted RBP16.36■□□□□ 0.21
SYNGR3-201ENST00000248121 DGAT2L7PQ6IED9 249 aa16.36■□□□□ 0.21
SYNGR3-201ENST00000248121 TINCRA0A1B0GVN0 87 aa16.35■□□□□ 0.21
SYNGR3-201ENST00000248121 TM2D2Q9BX73 214 aa16.35■□□□□ 0.21
SYNGR3-201ENST00000248121 J3QQQ9 107 aa16.34■□□□□ 0.21
SYNGR3-201ENST00000248121 CEND1Q8N111 149 aa16.34■□□□□ 0.21
SYNGR3-201ENST00000248121 IGHV3-64A0A075B6Q5 118 aa16.34■□□□□ 0.21
SYNGR3-201ENST00000248121 LEPROTO15243 131 aa16.34■□□□□ 0.21
SYNGR3-201ENST00000248121 TMEM243Q9BU79 118 aa16.34■□□□□ 0.21
SYNGR3-201ENST00000248121 DNHD1Q96M86 4753 aa16.33■□□□□ 0.21
SYNGR3-201ENST00000248121 A6NDN8 102 aa16.33■□□□□ 0.2
SYNGR3-201ENST00000248121 TAL2Q16559 108 aa16.33■□□□□ 0.2
SYNGR3-201ENST00000248121 CDC42SE2Q9NRR3 84 aa16.31■□□□□ 0.2
SYNGR3-201ENST00000248121 GYPEP15421 78 aa16.31■□□□□ 0.2
SYNGR3-201ENST00000248121 HIST1H4GQ99525 98 aa16.31■□□□□ 0.2
SYNGR3-201ENST00000248121 TRBV6-8A0A0A6YYG3 113 aa16.3■□□□□ 0.2
SYNGR3-201ENST00000248121 SCGB1D4Q6XE38 83 aa16.3■□□□□ 0.2
SYNGR3-201ENST00000248121 PRO0255Q9UI72 69 aa16.3■□□□□ 0.2
SYNGR3-201ENST00000248121 TRAV8-3A0A0A6YYJ7 113 aa16.3■□□□□ 0.2
SYNGR3-201ENST00000248121 A0A0J9YY99 117 aa16.3■□□□□ 0.2
SYNGR3-201ENST00000248121 LGALS3P17931 250 aaKnown RBP16.3■□□□□ 0.2
SYNGR3-201ENST00000248121 LINC00469Q8N7U9 141 aa16.3■□□□□ 0.2
SYNGR3-201ENST00000248121 IGHV3-30-3P0DP02 117 aa16.29■□□□□ 0.2
SYNGR3-201ENST00000248121 H3BRM9 83 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 UBE2L6O14933 153 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 COX6A2Q02221 97 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 OR5A1Q8NGJ0 315 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 IGLV5-45A0A087WSX0 123 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 TIRAPP58753 221 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 DEFB121Q5J5C9 76 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 LINC00242Q5T6M2 205 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 MRAPQ8TCY5 172 aa16.28■□□□□ 0.2
SYNGR3-201ENST00000248121 H7C423 109 aa16.27■□□□□ 0.2
SYNGR3-201ENST00000248121 AMMECR1LQ6DCA0 310 aa16.27■□□□□ 0.2
SYNGR3-201ENST00000248121 CDKN2A-AS1Q9UH64 79 aa16.27■□□□□ 0.2
SYNGR3-201ENST00000248121 FAM19A3Q7Z5A8 133 aa16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 GEMIN7Q9H840 131 aaKnown RBP16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 IGHV1-58A0A0C4DH39 117 aa16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 PTTG1IPP53801 180 aa16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 DAD1P61803 113 aa16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 GAGE6Q13070 117 aa16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 ATP6V0E2Q8NHE4 81 aa16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 VSIG2Q96IQ7 327 aa16.26■□□□□ 0.19
SYNGR3-201ENST00000248121 SPINK8P0C7L1 97 aa16.25■□□□□ 0.19
SYNGR3-201ENST00000248121 K7ERJ3 54 aa16.25■□□□□ 0.19
SYNGR3-201ENST00000248121 TRAV13-1A0A0B4J241 112 aa16.24■□□□□ 0.19
SYNGR3-201ENST00000248121 SMAGPQ0VAQ4 97 aa16.24■□□□□ 0.19
SYNGR3-201ENST00000248121 RAB37Q96AX2 223 aa16.24■□□□□ 0.19
SYNGR3-201ENST00000248121 HUWE1Q7Z6Z7 4374 aaKnown RBP16.23■□□□□ 0.19
SYNGR3-201ENST00000248121 PAX4O43316 350 aa16.23■□□□□ 0.19
SYNGR3-201ENST00000248121 NHP2Q9NX24 153 aaKnown RBP16.23■□□□□ 0.19
SYNGR3-201ENST00000248121 SPART-AS1P0CW21 52 aa16.23■□□□□ 0.19
SYNGR3-201ENST00000248121 C10orf126Q8N4M7 172 aa16.23■□□□□ 0.19
SYNGR3-201ENST00000248121 TMEM101Q96IK0 257 aa16.23■□□□□ 0.19
SYNGR3-201ENST00000248121 IGLV4-60A0A075B6I1 120 aa16.22■□□□□ 0.19
SYNGR3-201ENST00000248121 C9orf118A6NHY6 69 aa16.22■□□□□ 0.19
SYNGR3-201ENST00000248121 SMIM13P0DJ93 91 aa16.22■□□□□ 0.19
SYNGR3-201ENST00000248121 NAA38Q9BRA0 125 aaKnown RBP16.22■□□□□ 0.19
SYNGR3-201ENST00000248121 CHCHD5Q9BSY4 110 aa16.22■□□□□ 0.19
SYNGR3-201ENST00000248121 A0A096LPF7 62 aa16.21■□□□□ 0.19
SYNGR3-201ENST00000248121 HERVK_113P63121 156 aa16.21■□□□□ 0.19
SYNGR3-201ENST00000248121 SPANXB1Q9NS25 103 aaPredicted RBP16.21■□□□□ 0.19
SYNGR3-201ENST00000248121 ATP5G1P05496 136 aa16.2■□□□□ 0.18
SYNGR3-201ENST00000248121 VAMP3Q15836 100 aa16.2■□□□□ 0.18
SYNGR3-201ENST00000248121 A0A0J9YWU9 116 aa16.2■□□□□ 0.18
SYNGR3-201ENST00000248121 SRSF9Q13242 221 aaKnown RBP eCLIP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms