RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
HIF3A-202ENST00000244303 LITAFQ99732 161 aa10.39□□□□□ -0.75
HIF3A-202ENST00000244303 A8MZ25 164 aa10.38□□□□□ -0.75
HIF3A-202ENST00000244303 C11orf44Q8N8P7 122 aa10.38□□□□□ -0.75
HIF3A-202ENST00000244303 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
HIF3A-202ENST00000244303 YAE1D1Q9NRH1 226 aa10.38□□□□□ -0.75
HIF3A-202ENST00000244303 SONP18583 2426 aaKnown RBP10.38□□□□□ -0.75
HIF3A-202ENST00000244303 ZFAND6Q6FIF0 208 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 VSIG2Q96IQ7 327 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 ANAPC13Q9BS18 74 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 TENM4Q6N022 2769 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 NF1P21359 2839 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-202ENST00000244303 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 STHQ8IWL8 128 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 RNF183Q96D59 192 aa10.37□□□□□ -0.75
HIF3A-202ENST00000244303 SVIPQ8NHG7 77 aa10.36□□□□□ -0.75
HIF3A-202ENST00000244303 CCDC168Q8NDH2 2452 aa10.36□□□□□ -0.75
HIF3A-202ENST00000244303 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
HIF3A-202ENST00000244303 C1orf158Q8N1D5 194 aa10.36□□□□□ -0.75
HIF3A-202ENST00000244303 PRSS2P07478 247 aa10.35□□□□□ -0.75
HIF3A-202ENST00000244303 ATXN8Q156A1 80 aa10.35□□□□□ -0.75
HIF3A-202ENST00000244303 TRGV1A0A0A0MS02 117 aa10.34□□□□□ -0.75
HIF3A-202ENST00000244303 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
HIF3A-202ENST00000244303 SPANXDQ9BXN6 97 aa10.34□□□□□ -0.75
HIF3A-202ENST00000244303 SPANXCQ9NY87 97 aa10.34□□□□□ -0.75
HIF3A-202ENST00000244303 FLNAP21333 2647 aaKnown RBP10.34□□□□□ -0.75
HIF3A-202ENST00000244303 TRAV25A0A0B4J276 109 aa10.33□□□□□ -0.76
HIF3A-202ENST00000244303 NTN5Q8WTR8 489 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-202ENST00000244303 CDKN2A-AS1Q9UH64 79 aa10.33□□□□□ -0.76
HIF3A-202ENST00000244303 CCL24O00175 119 aa10.33□□□□□ -0.76
HIF3A-202ENST00000244303 SNCGO76070 127 aa10.33□□□□□ -0.76
HIF3A-202ENST00000244303 NPC2P61916 151 aa10.33□□□□□ -0.76
HIF3A-202ENST00000244303 M0QXV9 152 aa10.32□□□□□ -0.76
HIF3A-202ENST00000244303 MIAQ16674 131 aa10.32□□□□□ -0.76
HIF3A-202ENST00000244303 DGAT2L7PQ6IED9 249 aa10.32□□□□□ -0.76
HIF3A-202ENST00000244303 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-202ENST00000244303 PDZD2O15018 2839 aa10.32□□□□□ -0.76
HIF3A-202ENST00000244303 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
HIF3A-202ENST00000244303 CITED2Q99967 270 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-202ENST00000244303 LINC01006Q8NI28 216 aa10.31□□□□□ -0.76
HIF3A-202ENST00000244303 RNASE1P07998 156 aaKnown RBP10.31□□□□□ -0.76
HIF3A-202ENST00000244303 TIRAPP58753 221 aa10.31□□□□□ -0.76
HIF3A-202ENST00000244303 COX6A2Q02221 97 aa10.31□□□□□ -0.76
HIF3A-202ENST00000244303 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
HIF3A-202ENST00000244303 GAGE2EQ4V326 116 aa10.31□□□□□ -0.76
HIF3A-202ENST00000244303 Q6ZTI0 123 aa10.31□□□□□ -0.76
HIF3A-202ENST00000244303 GAGE2DQ9UEU5 116 aa10.31□□□□□ -0.76
HIF3A-202ENST00000244303 IGLV5-45A0A087WSX0 123 aa10.3□□□□□ -0.76
HIF3A-202ENST00000244303 TRIAP1O43715 76 aa10.3□□□□□ -0.76
HIF3A-202ENST00000244303 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
HIF3A-202ENST00000244303 TMEM101Q96IK0 257 aa10.3□□□□□ -0.76
HIF3A-202ENST00000244303 C16orf95Q9H693 158 aa10.3□□□□□ -0.76
HIF3A-202ENST00000244303 TRBV30A0A0K0K1B3 111 aa10.3□□□□□ -0.76
HIF3A-202ENST00000244303 TRAV8-4A0A0B4J246 113 aa10.29□□□□□ -0.76
HIF3A-202ENST00000244303 TEX49A0A1B0GTD5 131 aa10.29□□□□□ -0.76
HIF3A-202ENST00000244303 K7EQD1 137 aa10.29□□□□□ -0.76
HIF3A-202ENST00000244303 NIPBLQ6KC79 2804 aaeCLIP10.29□□□□□ -0.76
HIF3A-202ENST00000244303 CITED1Q99966 193 aa10.29□□□□□ -0.76
HIF3A-202ENST00000244303 KMT2BQ9UMN6 2715 aaPredicted RBP10.29□□□□□ -0.76
HIF3A-202ENST00000244303 SETXQ7Z333 2677 aaKnown RBP10.28□□□□□ -0.76
HIF3A-202ENST00000244303 RPL36AP83881 106 aaKnown RBP10.28□□□□□ -0.76
HIF3A-202ENST00000244303 DAND5Q8N907 189 aa10.28□□□□□ -0.76
HIF3A-202ENST00000244303 RPL36ALQ969Q0 106 aaKnown RBP10.28□□□□□ -0.76
HIF3A-202ENST00000244303 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
HIF3A-202ENST00000244303 NDUFA7O95182 113 aa10.28□□□□□ -0.76
HIF3A-202ENST00000244303 LINC00242Q5T6M2 205 aa10.28□□□□□ -0.76
HIF3A-202ENST00000244303 NTM-AS1Q6ZSK4 140 aa10.28□□□□□ -0.76
HIF3A-202ENST00000244303 ACANP16112 2415 aa10.27□□□□□ -0.76
HIF3A-202ENST00000244303 NDUFA1O15239 70 aa10.27□□□□□ -0.76
HIF3A-202ENST00000244303 GAGE5Q13069 117 aa10.27□□□□□ -0.76
HIF3A-202ENST00000244303 GAGE6Q13070 117 aa10.27□□□□□ -0.76
HIF3A-202ENST00000244303 TTC32Q5I0X7 151 aa10.27□□□□□ -0.76
HIF3A-202ENST00000244303 UBE2WQ96B02 151 aa10.27□□□□□ -0.76
HIF3A-202ENST00000244303 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.76
HIF3A-202ENST00000244303 NOTCH3Q9UM47 2321 aa10.27□□□□□ -0.77
HIF3A-202ENST00000244303 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.77
HIF3A-202ENST00000244303 TRBV10-1A0A0K0K1A3 114 aa10.27□□□□□ -0.77
HIF3A-202ENST00000244303 TIMM17BO60830 172 aa10.27□□□□□ -0.77
HIF3A-202ENST00000244303 COX6CP09669 75 aa10.27□□□□□ -0.77
HIF3A-202ENST00000244303 HERVK_113P63121 156 aa10.27□□□□□ -0.77
HIF3A-202ENST00000244303 C2orf82Q6UX34 121 aa10.27□□□□□ -0.77
HIF3A-202ENST00000244303 NOP10Q9NPE3 64 aaKnown RBP10.27□□□□□ -0.77
HIF3A-202ENST00000244303 CRLF1O75462 422 aa10.26□□□□□ -0.77
HIF3A-202ENST00000244303 SETD2Q9BYW2 2564 aaPredicted RBP10.26□□□□□ -0.77
HIF3A-202ENST00000244303 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
HIF3A-202ENST00000244303 GAGE4Q13068 117 aa10.26□□□□□ -0.77
HIF3A-202ENST00000244303 DAZ2Q13117 558 aaKnown RBP10.26□□□□□ -0.77
HIF3A-202ENST00000244303 DAZ4Q86SG3 579 aaKnown RBP10.26□□□□□ -0.77
HIF3A-202ENST00000244303 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
HIF3A-202ENST00000244303 DAZ3Q9NR90 486 aaKnown RBP10.26□□□□□ -0.77
HIF3A-202ENST00000244303 SS18L2Q9UHA2 77 aa10.26□□□□□ -0.77
HIF3A-202ENST00000244303 JMJD1CQ15652 2540 aa10.25□□□□□ -0.77
HIF3A-202ENST00000244303 IGLV5-39A0A0G2JS06 123 aa10.25□□□□□ -0.77
HIF3A-202ENST00000244303 GIG44P09565 113 aaPredicted RBP10.25□□□□□ -0.77
HIF3A-202ENST00000244303 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
HIF3A-202ENST00000244303 IFITM1P13164 125 aa10.24□□□□□ -0.77
HIF3A-202ENST00000244303 RPL13AP40429 203 aaKnown RBP10.24□□□□□ -0.77
HIF3A-202ENST00000244303 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms