RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CUBNO60494 3623 aa16.02■□□□□ 0.15
CCDC9-201ENST00000221922 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.01■□□□□ 0.15
CCDC9-201ENST00000221922 ADARB2-AS1A8MUL3 147 aa16.01■□□□□ 0.15
CCDC9-201ENST00000221922 CEMP1Q6PRD7 247 aaPredicted RBP16.01■□□□□ 0.15
CCDC9-201ENST00000221922 PPDPFLQ8WWR9 84 aa16.01■□□□□ 0.15
CCDC9-201ENST00000221922 Q9UF83 564 aa16.01■□□□□ 0.15
CCDC9-201ENST00000221922 C1orf158Q8N1D5 194 aa16.01■□□□□ 0.15
CCDC9-201ENST00000221922 LITAFQ99732 161 aa16.01■□□□□ 0.15
CCDC9-201ENST00000221922 CARD19Q96LW7 228 aa16■□□□□ 0.15
CCDC9-201ENST00000221922 ERG28Q9UKR5 140 aa16■□□□□ 0.15
CCDC9-201ENST00000221922 UBE2D4Q9Y2X8 147 aa16■□□□□ 0.15
CCDC9-201ENST00000221922 IGHV1-58A0A0C4DH39 117 aa15.99■□□□□ 0.15
CCDC9-201ENST00000221922 TINCRA0A1B0GVN0 87 aa15.99■□□□□ 0.15
CCDC9-201ENST00000221922 IL17DQ8TAD2 202 aa15.99■□□□□ 0.15
CCDC9-201ENST00000221922 LY6G6DO95868 133 aa15.99■□□□□ 0.15
CCDC9-201ENST00000221922 CDIP1Q9H305 208 aa15.99■□□□□ 0.15
CCDC9-201ENST00000221922 M0QXV9 152 aa15.98■□□□□ 0.15
CCDC9-201ENST00000221922 IGHV3OR16-12A0A075B7B8 117 aa15.97■□□□□ 0.15
CCDC9-201ENST00000221922 TRAV8-3A0A0A6YYJ7 113 aa15.97■□□□□ 0.15
CCDC9-201ENST00000221922 IGLV1-51P01701 117 aa15.97■□□□□ 0.15
CCDC9-201ENST00000221922 VSIG2Q96IQ7 327 aa15.96■□□□□ 0.15
CCDC9-201ENST00000221922 FAM110AQ9BQ89 295 aa15.96■□□□□ 0.15
CCDC9-201ENST00000221922 RNASE13Q5GAN3 156 aaKnown RBP15.96■□□□□ 0.15
CCDC9-201ENST00000221922 HIVEP2P31629 2446 aa15.96■□□□□ 0.14
CCDC9-201ENST00000221922 SPANXDQ9BXN6 97 aa15.95■□□□□ 0.14
CCDC9-201ENST00000221922 SPANXCQ9NY87 97 aa15.95■□□□□ 0.14
CCDC9-201ENST00000221922 TRGV1A0A0A0MS02 117 aa15.94■□□□□ 0.14
CCDC9-201ENST00000221922 NDUFA12Q9UI09 145 aa15.94■□□□□ 0.14
CCDC9-201ENST00000221922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.93■□□□□ 0.14
CCDC9-201ENST00000221922 IGKV2-29A2NJV5 120 aaPredicted RBP15.93■□□□□ 0.14
CCDC9-201ENST00000221922 ANKRD29Q8N6D5 301 aa15.93■□□□□ 0.14
CCDC9-201ENST00000221922 SETD2Q9BYW2 2564 aaPredicted RBP15.93■□□□□ 0.14
CCDC9-201ENST00000221922 SLC25A20O43772 301 aa15.92■□□□□ 0.14
CCDC9-201ENST00000221922 ADAMTSL4-AS1Q5T5F5 129 aa15.92■□□□□ 0.14
CCDC9-201ENST00000221922 Q6ZUT4 128 aa15.92■□□□□ 0.14
CCDC9-201ENST00000221922 H7C2G1 150 aa15.91■□□□□ 0.14
CCDC9-201ENST00000221922 TRBV30A0A0K0K1B3 111 aa15.91■□□□□ 0.14
CCDC9-201ENST00000221922 C9JAW5 83 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 IGHV3-38A0A0C4DH36 116 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 TRBV10-1A0A0K0K1A3 114 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 SPINK8P0C7L1 97 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 MIAQ16674 131 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 ZFAND6Q6FIF0 208 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 RNF183Q96D59 192 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 LINC01600Q96MT4 127 aa15.9■□□□□ 0.14
CCDC9-201ENST00000221922 TRAV4A0A0B4J268 109 aa15.89■□□□□ 0.13
CCDC9-201ENST00000221922 Q1RN00 199 aa15.89■□□□□ 0.13
CCDC9-201ENST00000221922 C19orf73Q9NVV2 129 aa15.89■□□□□ 0.13
CCDC9-201ENST00000221922 IGLV5-45A0A087WSX0 123 aa15.88■□□□□ 0.13
CCDC9-201ENST00000221922 PRSS2P07478 247 aa15.88■□□□□ 0.13
CCDC9-201ENST00000221922 TIRAPP58753 221 aa15.88■□□□□ 0.13
CCDC9-201ENST00000221922 KRTAP10-3P60369 221 aa15.88■□□□□ 0.13
CCDC9-201ENST00000221922 ATXN8Q156A1 80 aa15.88■□□□□ 0.13
CCDC9-201ENST00000221922 GEMIN7Q9H840 131 aaKnown RBP15.88■□□□□ 0.13
CCDC9-201ENST00000221922 NOTCH2Q04721 2471 aa15.88■□□□□ 0.13
CCDC9-201ENST00000221922 DAZ2Q13117 558 aaKnown RBP15.88■□□□□ 0.13
CCDC9-201ENST00000221922 SETXQ7Z333 2677 aaKnown RBP15.87■□□□□ 0.13
CCDC9-201ENST00000221922 A8MZ25 164 aa15.87■□□□□ 0.13
CCDC9-201ENST00000221922 K7EQD1 137 aa15.87■□□□□ 0.13
CCDC9-201ENST00000221922 TIMM17BO60830 172 aa15.87■□□□□ 0.13
CCDC9-201ENST00000221922 RPL36AP83881 106 aaKnown RBP15.87■□□□□ 0.13
CCDC9-201ENST00000221922 RPL36ALQ969Q0 106 aaKnown RBP15.87■□□□□ 0.13
CCDC9-201ENST00000221922 C16orf74Q96GX8 76 aa15.87■□□□□ 0.13
CCDC9-201ENST00000221922 Q6ZTI0 123 aa15.87■□□□□ 0.13
CCDC9-201ENST00000221922 FLNBO75369 2602 aaKnown RBP15.86■□□□□ 0.13
CCDC9-201ENST00000221922 TRIAP1O43715 76 aa15.86■□□□□ 0.13
CCDC9-201ENST00000221922 GIG44P09565 113 aaPredicted RBP15.86■□□□□ 0.13
CCDC9-201ENST00000221922 OTOGQ6ZRI0 2925 aa15.85■□□□□ 0.13
CCDC9-201ENST00000221922 LINC01620Q4KN68 170 aa15.85■□□□□ 0.13
CCDC9-201ENST00000221922 XGP55808 180 aa15.85■□□□□ 0.13
CCDC9-201ENST00000221922 DAZ4Q86SG3 579 aaKnown RBP15.85■□□□□ 0.13
CCDC9-201ENST00000221922 DAZ3Q9NR90 486 aaKnown RBP15.85■□□□□ 0.13
CCDC9-201ENST00000221922 CDKN2A-AS1Q9UH64 79 aa15.85■□□□□ 0.13
CCDC9-201ENST00000221922 BAHCC1Q9P281 2608 aa15.84■□□□□ 0.13
CCDC9-201ENST00000221922 DGAT2L7PQ6IED9 249 aa15.84■□□□□ 0.13
CCDC9-201ENST00000221922 MT-ATP8P03928 68 aa15.83■□□□□ 0.13
CCDC9-201ENST00000221922 WFDC10AQ9H1F0 79 aa15.83■□□□□ 0.13
CCDC9-201ENST00000221922 NOP10Q9NPE3 64 aaKnown RBP15.83■□□□□ 0.13
CCDC9-201ENST00000221922 A0A1B0GV72 72 aa15.83■□□□□ 0.12
CCDC9-201ENST00000221922 INAFM1C9JVW0 142 aa15.83■□□□□ 0.12
CCDC9-201ENST00000221922 RPL35AP18077 110 aaKnown RBP15.83■□□□□ 0.12
CCDC9-201ENST00000221922 TMEM262E9PQX1 116 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 NDUFA1O15239 70 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 CIDEAO60543 219 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 IFITM1P13164 125 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.82■□□□□ 0.12
CCDC9-201ENST00000221922 LINC00482Q8N8I6 264 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 TMEM101Q96IK0 257 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 ICOSQ9Y6W8 199 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 PF4P02776 101 aa15.82■□□□□ 0.12
CCDC9-201ENST00000221922 FAM19A3Q7Z5A8 133 aa15.8■□□□□ 0.12
CCDC9-201ENST00000221922 NIPBLQ6KC79 2804 aaeCLIP15.8■□□□□ 0.12
CCDC9-201ENST00000221922 TRBV10-2A0A0K0K1G8 114 aa15.8■□□□□ 0.12
CCDC9-201ENST00000221922 IGLV5-39A0A0G2JS06 123 aa15.79■□□□□ 0.12
CCDC9-201ENST00000221922 COX6A2Q02221 97 aa15.79■□□□□ 0.12
CCDC9-201ENST00000221922 CSNK1G2-AS1Q8NCQ2 148 aa15.79■□□□□ 0.12
CCDC9-201ENST00000221922 PLAC8L1A1L4L8 177 aa15.79■□□□□ 0.12
CCDC9-201ENST00000221922 HERVK_113P63121 156 aa15.79■□□□□ 0.12
CCDC9-201ENST00000221922 OVOL2Q9BRP0 275 aa15.79■□□□□ 0.12
CCDC9-201ENST00000221922 CSDC2Q9Y534 153 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms