RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
SNAPC2-201ENST00000221573 TIMM21Q9BVV7 248 aa13.05□□□□□ -0.32
SNAPC2-201ENST00000221573 PRR34Q9NV39 138 aa13.05□□□□□ -0.32
SNAPC2-201ENST00000221573 CRPP02741 224 aa13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 RAB5BP61020 215 aa13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 REG3AQ06141 175 aa13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 PMCHL1Q16048 86 aa13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 RNASE13Q5GAN3 156 aaKnown RBP13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 Q6ZUT4 128 aa13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 CDC42SE2Q9NRR3 84 aa13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 CSDC2Q9Y534 153 aaKnown RBP13.04□□□□□ -0.32
SNAPC2-201ENST00000221573 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 FAM104AQ969W3 186 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 TOMM6Q96B49 74 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 OPRPNQ99935 248 aaPredicted RBP13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 SPANXA1Q9NS26 97 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 A0A096LNJ9 63 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 IGKV3OR2-268A0A0C4DH90 116 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 LINC00310P59036 64 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 ZNF664Q8N3J9 261 aa13.03□□□□□ -0.32
SNAPC2-201ENST00000221573 TRAV8-3A0A0A6YYJ7 113 aa13.02□□□□□ -0.33
SNAPC2-201ENST00000221573 Q6ZRN7 208 aaPredicted RBP13.02□□□□□ -0.33
SNAPC2-201ENST00000221573 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.33
SNAPC2-201ENST00000221573 RTL8CO15255 209 aa13.01□□□□□ -0.33
SNAPC2-201ENST00000221573 SERF1AO75920 110 aa13.01□□□□□ -0.33
SNAPC2-201ENST00000221573 PYGO1Q9Y3Y4 419 aa13.01□□□□□ -0.33
SNAPC2-201ENST00000221573 IGLV4-3A0A075B6K6 122 aa13□□□□□ -0.33
SNAPC2-201ENST00000221573 C1orf196B1AJZ1 125 aa13□□□□□ -0.33
SNAPC2-201ENST00000221573 G0S2P27469 103 aa13□□□□□ -0.33
SNAPC2-201ENST00000221573 IGLV10-54A0A075B6I4 117 aa12.99□□□□□ -0.33
SNAPC2-201ENST00000221573 IGIPA6NJ69 53 aa12.99□□□□□ -0.33
SNAPC2-201ENST00000221573 MRPS36P82909 103 aaKnown RBP12.99□□□□□ -0.33
SNAPC2-201ENST00000221573 MIAQ16674 131 aa12.99□□□□□ -0.33
SNAPC2-201ENST00000221573 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
SNAPC2-201ENST00000221573 IGKV2D-24A0A075B6R9 120 aa12.98□□□□□ -0.33
SNAPC2-201ENST00000221573 NUPR1O60356 82 aa12.98□□□□□ -0.33
SNAPC2-201ENST00000221573 HBDP02042 147 aa12.98□□□□□ -0.33
SNAPC2-201ENST00000221573 HSBP1O75506 76 aa12.98□□□□□ -0.33
SNAPC2-201ENST00000221573 SCGB3A1Q96QR1 104 aa12.98□□□□□ -0.33
SNAPC2-201ENST00000221573 DNAH17Q9UFH2 4485 aa12.97□□□□□ -0.33
SNAPC2-201ENST00000221573 ERASQ7Z444 233 aa12.97□□□□□ -0.33
SNAPC2-201ENST00000221573 FAM19A2Q8N3H0 131 aa12.97□□□□□ -0.33
SNAPC2-201ENST00000221573 TMEM141Q96I45 108 aa12.97□□□□□ -0.33
SNAPC2-201ENST00000221573 TIMM17AQ99595 171 aa12.97□□□□□ -0.33
SNAPC2-201ENST00000221573 C1orf43Q9BWL3 253 aa12.97□□□□□ -0.33
SNAPC2-201ENST00000221573 ZC2HC1BQ5TFG8 222 aa12.96□□□□□ -0.33
SNAPC2-201ENST00000221573 RMI2Q96E14 147 aa12.96□□□□□ -0.33
SNAPC2-201ENST00000221573 LINC00959A0A1B0GUT2 108 aa12.95□□□□□ -0.34
SNAPC2-201ENST00000221573 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
SNAPC2-201ENST00000221573 TRAV8-4A0A0B4J246 113 aa12.94□□□□□ -0.34
SNAPC2-201ENST00000221573 PDZD11Q5EBL8 140 aa12.94□□□□□ -0.34
SNAPC2-201ENST00000221573 KRTAP26-1Q6PEX3 210 aa12.94□□□□□ -0.34
SNAPC2-201ENST00000221573 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
SNAPC2-201ENST00000221573 TM2D2Q9BX73 214 aa12.94□□□□□ -0.34
SNAPC2-201ENST00000221573 TRAV13-1A0A0B4J241 112 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 PSCAO43653 123 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 NPSP0C0P6 89 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 MAPKAPK5-AS1Q8N8E1 139 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 IFITM10A6NMD0 228 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 Q6ZN92 141 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 TEX43Q6ZNM6 134 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 AMELXQ99217 191 aa12.93□□□□□ -0.34
SNAPC2-201ENST00000221573 FAT2Q9NYQ8 4349 aa12.92□□□□□ -0.34
SNAPC2-201ENST00000221573 NDUFA6P56556 154 aa12.92□□□□□ -0.34
SNAPC2-201ENST00000221573 TNP2Q05952 138 aa12.92□□□□□ -0.34
SNAPC2-201ENST00000221573 COX11Q9Y6N1 276 aa12.92□□□□□ -0.34
SNAPC2-201ENST00000221573 CCL25O15444 150 aa12.91□□□□□ -0.34
SNAPC2-201ENST00000221573 SS18Q15532 418 aa12.91□□□□□ -0.34
SNAPC2-201ENST00000221573 VCX2Q9H322 139 aa12.91□□□□□ -0.34
SNAPC2-201ENST00000221573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.34
SNAPC2-201ENST00000221573 XCL1P47992 114 aa12.9□□□□□ -0.34
SNAPC2-201ENST00000221573 BAALCQ8WXS3 180 aa12.9□□□□□ -0.34
SNAPC2-201ENST00000221573 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
SNAPC2-201ENST00000221573 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
SNAPC2-201ENST00000221573 COA6Q5JTJ3 125 aaKnown RBP12.89□□□□□ -0.35
SNAPC2-201ENST00000221573 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
SNAPC2-201ENST00000221573 LINC00336Q6ZUF6 198 aa12.88□□□□□ -0.35
SNAPC2-201ENST00000221573 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
SNAPC2-201ENST00000221573 ATP5LO75964 103 aa12.88□□□□□ -0.35
SNAPC2-201ENST00000221573 UBE2D1P51668 147 aa12.88□□□□□ -0.35
SNAPC2-201ENST00000221573 WFDC2Q14508 124 aa12.88□□□□□ -0.35
SNAPC2-201ENST00000221573 LRCOL1A6NCL2 159 aa12.87□□□□□ -0.35
SNAPC2-201ENST00000221573 LECT2O14960 151 aa12.87□□□□□ -0.35
SNAPC2-201ENST00000221573 FOXI1Q12951 378 aa12.87□□□□□ -0.35
SNAPC2-201ENST00000221573 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
SNAPC2-201ENST00000221573 A0A087WTM6 91 aa12.85□□□□□ -0.35
SNAPC2-201ENST00000221573 FABP4P15090 132 aa12.85□□□□□ -0.35
SNAPC2-201ENST00000221573 PMVKQ15126 192 aa12.85□□□□□ -0.35
SNAPC2-201ENST00000221573 LINC00242Q5T6M2 205 aa12.85□□□□□ -0.35
SNAPC2-201ENST00000221573 CD164L2Q6UWJ8 174 aa12.85□□□□□ -0.35
SNAPC2-201ENST00000221573 IFI27L1Q96BM0 104 aa12.85□□□□□ -0.35
SNAPC2-201ENST00000221573 CST9LQ9H4G1 147 aa12.85□□□□□ -0.35
SNAPC2-201ENST00000221573 COX6A2Q02221 97 aa12.83□□□□□ -0.36
SNAPC2-201ENST00000221573 A0A0J9YXV3 536 aa12.82□□□□□ -0.36
SNAPC2-201ENST00000221573 USP17L23D6RBM5 183 aa12.82□□□□□ -0.36
SNAPC2-201ENST00000221573 PRSS1P07477 247 aa12.82□□□□□ -0.36
SNAPC2-201ENST00000221573 FAM19A3Q7Z5A8 133 aa12.82□□□□□ -0.36
SNAPC2-201ENST00000221573 DNAH11Q96DT5 4516 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms