RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 TINCRA0A1B0GVN0 87 aa11.7□□□□□ -0.54
SF3A2-201ENST00000221494 TMEM89A2RUT3 159 aa11.7□□□□□ -0.54
SF3A2-201ENST00000221494 IGHV3-11P01762 117 aa11.7□□□□□ -0.54
SF3A2-201ENST00000221494 C2orf82Q6UX34 121 aa11.69□□□□□ -0.54
SF3A2-201ENST00000221494 TRAV4A0A0B4J268 109 aa11.68□□□□□ -0.54
SF3A2-201ENST00000221494 CD28P10747 220 aa11.68□□□□□ -0.54
SF3A2-201ENST00000221494 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
SF3A2-201ENST00000221494 H7C2G1 150 aa11.68□□□□□ -0.54
SF3A2-201ENST00000221494 KIR2DL5BQ8NHK3 375 aa11.68□□□□□ -0.54
SF3A2-201ENST00000221494 IGKV3-7A0A075B6H7 116 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 K7EQG2 157 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 NDUFA12Q9UI09 145 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 H7C423 109 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 LST1O00453 97 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 ELANEP08246 267 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 C15orf53Q8NAA6 179 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
SF3A2-201ENST00000221494 ACANP16112 2415 aa11.66□□□□□ -0.54
SF3A2-201ENST00000221494 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
SF3A2-201ENST00000221494 ACYP1P07311 99 aa11.65□□□□□ -0.54
SF3A2-201ENST00000221494 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
SF3A2-201ENST00000221494 FAM104AQ969W3 186 aa11.65□□□□□ -0.55
SF3A2-201ENST00000221494 OTOGQ6ZRI0 2925 aa11.64□□□□□ -0.55
SF3A2-201ENST00000221494 MYO9AB2RTY4 2548 aa11.64□□□□□ -0.55
SF3A2-201ENST00000221494 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
SF3A2-201ENST00000221494 TRBV7-7A0A0K0K1E9 115 aa11.64□□□□□ -0.55
SF3A2-201ENST00000221494 CRLF1O75462 422 aa11.64□□□□□ -0.55
SF3A2-201ENST00000221494 COPS9Q8WXC6 57 aa11.64□□□□□ -0.55
SF3A2-201ENST00000221494 SONP18583 2426 aaKnown RBP11.64□□□□□ -0.55
SF3A2-201ENST00000221494 RS1O15537 224 aa11.63□□□□□ -0.55
SF3A2-201ENST00000221494 IMUPQ9GZP8 106 aa11.63□□□□□ -0.55
SF3A2-201ENST00000221494 PRSS2P07478 247 aa11.62□□□□□ -0.55
SF3A2-201ENST00000221494 PSMB8P28062 276 aa11.62□□□□□ -0.55
SF3A2-201ENST00000221494 DEFB104AQ8WTQ1 72 aa11.62□□□□□ -0.55
SF3A2-201ENST00000221494 ANK3Q12955 4377 aaKnown RBP11.62□□□□□ -0.55
SF3A2-201ENST00000221494 IGLV5-45A0A087WSX0 123 aa11.61□□□□□ -0.55
SF3A2-201ENST00000221494 A8MTW9 85 aa11.61□□□□□ -0.55
SF3A2-201ENST00000221494 NDUFA1O15239 70 aa11.61□□□□□ -0.55
SF3A2-201ENST00000221494 TIRAPP58753 221 aa11.61□□□□□ -0.55
SF3A2-201ENST00000221494 OR13C6PQ8NH95 151 aa11.61□□□□□ -0.55
SF3A2-201ENST00000221494 TRAV12-2A0A075B6T6 113 aa11.6□□□□□ -0.55
SF3A2-201ENST00000221494 ADAMTSL4-AS1Q5T5F5 129 aa11.6□□□□□ -0.55
SF3A2-201ENST00000221494 TMEM86BQ8N661 226 aa11.6□□□□□ -0.55
SF3A2-201ENST00000221494 ZNF702PQ9H963 129 aa11.6□□□□□ -0.55
SF3A2-201ENST00000221494 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
SF3A2-201ENST00000221494 CIRBPQ14011 172 aaKnown RBP11.59□□□□□ -0.55
SF3A2-201ENST00000221494 SPINK13Q1W4C9 94 aa11.59□□□□□ -0.55
SF3A2-201ENST00000221494 TRAV8-3A0A0A6YYJ7 113 aa11.59□□□□□ -0.55
SF3A2-201ENST00000221494 SMR3AQ99954 134 aa11.59□□□□□ -0.55
SF3A2-201ENST00000221494 LINC00467Q9BRT7 94 aa11.58□□□□□ -0.56
SF3A2-201ENST00000221494 CHCHD7Q9BUK0 85 aa11.58□□□□□ -0.56
SF3A2-201ENST00000221494 Q8N2B8 174 aa11.58□□□□□ -0.56
SF3A2-201ENST00000221494 TMEM101Q96IK0 257 aa11.58□□□□□ -0.56
SF3A2-201ENST00000221494 CCDC179H3BU77 68 aa11.57□□□□□ -0.56
SF3A2-201ENST00000221494 ADARB2-AS1A8MUL3 147 aa11.56□□□□□ -0.56
SF3A2-201ENST00000221494 EDN2P20800 178 aa11.56□□□□□ -0.56
SF3A2-201ENST00000221494 ZNF415Q09FC8 603 aa11.56□□□□□ -0.56
SF3A2-201ENST00000221494 C10orf99Q6UWK7 81 aa11.56□□□□□ -0.56
SF3A2-201ENST00000221494 FAM19A3Q7Z5A8 133 aa11.56□□□□□ -0.56
SF3A2-201ENST00000221494 ESM1Q9NQ30 184 aa11.56□□□□□ -0.56
SF3A2-201ENST00000221494 DNAJC9-AS1A6NH13 148 aa11.55□□□□□ -0.56
SF3A2-201ENST00000221494 COX7A2LO14548 114 aa11.54□□□□□ -0.56
SF3A2-201ENST00000221494 LY6G6DO95868 133 aa11.54□□□□□ -0.56
SF3A2-201ENST00000221494 IGKV3-20P01619 116 aa11.54□□□□□ -0.56
SF3A2-201ENST00000221494 CLEC2BQ92478 149 aa11.54□□□□□ -0.56
SF3A2-201ENST00000221494 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
SF3A2-201ENST00000221494 MTORP42345 2549 aa11.54□□□□□ -0.56
SF3A2-201ENST00000221494 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
SF3A2-201ENST00000221494 ATP5G1P05496 136 aa11.54□□□□□ -0.56
SF3A2-201ENST00000221494 IGHV3-53P01767 116 aa11.53□□□□□ -0.56
SF3A2-201ENST00000221494 TRACP01848 142 aa11.53□□□□□ -0.56
SF3A2-201ENST00000221494 J3KT08 172 aa11.52□□□□□ -0.56
SF3A2-201ENST00000221494 HERVK_113P63121 156 aa11.52□□□□□ -0.56
SF3A2-201ENST00000221494 FAM19A5Q7Z5A7 132 aaPredicted RBP11.52□□□□□ -0.56
SF3A2-201ENST00000221494 A0A1B0GX51 115 aa11.52□□□□□ -0.57
SF3A2-201ENST00000221494 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
SF3A2-201ENST00000221494 NACAE9PAV3 2078 aa11.51□□□□□ -0.57
SF3A2-201ENST00000221494 BEAN1Q3B7T3 259 aa11.51□□□□□ -0.57
SF3A2-201ENST00000221494 FAM222AQ5U5X8 452 aa11.51□□□□□ -0.57
SF3A2-201ENST00000221494 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
SF3A2-201ENST00000221494 LINC00643Q86TS7 51 aa11.51□□□□□ -0.57
SF3A2-201ENST00000221494 LINC00308Q8TCZ7 52 aa11.51□□□□□ -0.57
SF3A2-201ENST00000221494 CUBNO60494 3623 aa11.51□□□□□ -0.57
SF3A2-201ENST00000221494 Q6ZSV7 163 aa11.5□□□□□ -0.57
SF3A2-201ENST00000221494 HIVEP2P31629 2446 aa11.5□□□□□ -0.57
SF3A2-201ENST00000221494 RBMY1A1P0DJD3 496 aaKnown RBP11.5□□□□□ -0.57
SF3A2-201ENST00000221494 RBMY1CP0DJD4 496 aa11.5□□□□□ -0.57
SF3A2-201ENST00000221494 RBMY1FQ15415 496 aaKnown RBP11.5□□□□□ -0.57
SF3A2-201ENST00000221494 CEMP1Q6PRD7 247 aaPredicted RBP11.5□□□□□ -0.57
SF3A2-201ENST00000221494 NF1P21359 2839 aa11.5□□□□□ -0.57
SF3A2-201ENST00000221494 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
SF3A2-201ENST00000221494 CXCL5P42830 114 aa11.48□□□□□ -0.57
SF3A2-201ENST00000221494 RPS28P62857 69 aaKnown RBP11.48□□□□□ -0.57
SF3A2-201ENST00000221494 MEIG1Q5JSS6 88 aa11.48□□□□□ -0.57
SF3A2-201ENST00000221494 DAND5Q8N907 189 aa11.48□□□□□ -0.57
SF3A2-201ENST00000221494 HIVEP1P15822 2718 aa11.48□□□□□ -0.57
SF3A2-201ENST00000221494 PF4P02776 101 aa11.48□□□□□ -0.57
SF3A2-201ENST00000221494 UBE2E2Q96LR5 201 aa11.48□□□□□ -0.57
SF3A2-201ENST00000221494 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
SF3A2-201ENST00000221494 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms