RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DEFB113Q30KQ7 82 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 STHQ8IWL8 128 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 TMEM86BQ8N661 226 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.56□□□□□ -0.88
SRP54-201ENST00000216774 NPC2P61916 151 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 LINC00242Q5T6M2 205 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 C1orf158Q8N1D5 194 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 UBE2WQ96B02 151 aa9.56□□□□□ -0.88
SRP54-201ENST00000216774 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
SRP54-201ENST00000216774 H7C423 109 aa9.55□□□□□ -0.88
SRP54-201ENST00000216774 LST1O00453 97 aa9.55□□□□□ -0.88
SRP54-201ENST00000216774 DAZ2Q13117 558 aaKnown RBP9.55□□□□□ -0.88
SRP54-201ENST00000216774 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
SRP54-201ENST00000216774 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
SRP54-201ENST00000216774 CITED1Q99966 193 aa9.55□□□□□ -0.88
SRP54-201ENST00000216774 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
SRP54-201ENST00000216774 TRGV1A0A0A0MS02 117 aa9.54□□□□□ -0.88
SRP54-201ENST00000216774 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
SRP54-201ENST00000216774 COX6A2Q02221 97 aa9.54□□□□□ -0.88
SRP54-201ENST00000216774 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
SRP54-201ENST00000216774 K7EQD1 137 aa9.54□□□□□ -0.88
SRP54-201ENST00000216774 Q6ZSV7 163 aa9.54□□□□□ -0.88
SRP54-201ENST00000216774 POLQO75417 2590 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 Q9H8V8 135 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 ACACBO00763 2458 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 TRAV8-4A0A0B4J246 113 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 KRTAP10-9P60411 292 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 TEX29Q8N6K0 151 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 DAND5Q8N907 189 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 LINC00308Q8TCZ7 52 aa9.53□□□□□ -0.88
SRP54-201ENST00000216774 TRAV4A0A0B4J268 109 aa9.52□□□□□ -0.89
SRP54-201ENST00000216774 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
SRP54-201ENST00000216774 LINC00694P0DN24 101 aa9.52□□□□□ -0.89
SRP54-201ENST00000216774 CLEC2BQ92478 149 aa9.52□□□□□ -0.89
SRP54-201ENST00000216774 Q96MF0 132 aa9.52□□□□□ -0.89
SRP54-201ENST00000216774 SNCGO76070 127 aa9.52□□□□□ -0.89
SRP54-201ENST00000216774 CITED2Q99967 270 aaPredicted RBP9.52□□□□□ -0.89
SRP54-201ENST00000216774 NTM-AS1Q6ZSK4 140 aa9.51□□□□□ -0.89
SRP54-201ENST00000216774 CENPEQ02224 2701 aa9.51□□□□□ -0.89
SRP54-201ENST00000216774 Q6ZTI0 123 aa9.51□□□□□ -0.89
SRP54-201ENST00000216774 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
SRP54-201ENST00000216774 UBR5O95071 2799 aaPredicted RBP9.5□□□□□ -0.89
SRP54-201ENST00000216774 TEX15Q9BXT5 2789 aa9.5□□□□□ -0.89
SRP54-201ENST00000216774 DEFB121Q5J5C9 76 aa9.5□□□□□ -0.89
SRP54-201ENST00000216774 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
SRP54-201ENST00000216774 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
SRP54-201ENST00000216774 FAM240AA0A1B0GVK7 77 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 HERV-K104P63124 156 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 MYO9AB2RTY4 2548 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 F5H768 121 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 CCL24O00175 119 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 PRB1P04280 392 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 GAGE2BQ13066 116 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 GAGE2EQ4V326 116 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 GAGE2DQ9UEU5 116 aa9.49□□□□□ -0.89
SRP54-201ENST00000216774 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 HIST2H2BDQ6DRA6 164 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 Q6Q795 121 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 PRIMA1Q86XR5 153 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 NDUFA7O95182 113 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 CMC4P56277 68 aaPredicted RBP9.48□□□□□ -0.89
SRP54-201ENST00000216774 MRPL23Q16540 153 aaKnown RBP9.48□□□□□ -0.89
SRP54-201ENST00000216774 KRTAP1-3Q8IUG1 177 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 NAV2Q8IVL1 2488 aa9.48□□□□□ -0.89
SRP54-201ENST00000216774 LRRK2Q5S007 2527 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 DNAJC9-AS1A6NH13 148 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 COX7A2LO14548 114 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 FAM208BQ5VWN6 2430 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 GAGE12JA6NER3 117 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 GAGE4Q13068 117 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 GAGE5Q13069 117 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
SRP54-201ENST00000216774 PTPN13Q12923 2485 aa9.46□□□□□ -0.89
SRP54-201ENST00000216774 UBE2L6O14933 153 aa9.46□□□□□ -0.9
SRP54-201ENST00000216774 CRLF1O75462 422 aa9.46□□□□□ -0.9
SRP54-201ENST00000216774 SOSTDC1Q6X4U4 206 aa9.46□□□□□ -0.9
SRP54-201ENST00000216774 C16orf74Q96GX8 76 aa9.46□□□□□ -0.9
SRP54-201ENST00000216774 ZNF462Q96JM2 2506 aa9.46□□□□□ -0.9
SRP54-201ENST00000216774 A0A1W2PRX2 142 aa9.45□□□□□ -0.9
SRP54-201ENST00000216774 MEIG1Q5JSS6 88 aa9.45□□□□□ -0.9
SRP54-201ENST00000216774 NOP10Q9NPE3 64 aaKnown RBP9.45□□□□□ -0.9
SRP54-201ENST00000216774 C15orf53Q8NAA6 179 aa9.45□□□□□ -0.9
SRP54-201ENST00000216774 CHD6Q8TD26 2715 aa9.45□□□□□ -0.9
SRP54-201ENST00000216774 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
SRP54-201ENST00000216774 FAM110AQ9BQ89 295 aa9.44□□□□□ -0.9
SRP54-201ENST00000216774 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
SRP54-201ENST00000216774 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
SRP54-201ENST00000216774 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
SRP54-201ENST00000216774 PLAC8L1A1L4L8 177 aa9.43□□□□□ -0.9
SRP54-201ENST00000216774 NDUFV3P56181 108 aaKnown RBP9.43□□□□□ -0.9
SRP54-201ENST00000216774 BBC3Q96PG8 261 aaPredicted RBP9.43□□□□□ -0.9
SRP54-201ENST00000216774 TRACP01848 142 aa9.43□□□□□ -0.9
SRP54-201ENST00000216774 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
SRP54-201ENST00000216774 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
SRP54-201ENST00000216774 ABCA12Q86UK0 2595 aa9.42□□□□□ -0.9
SRP54-201ENST00000216774 PF4P02776 101 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms