RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 RPL35AP18077 110 aaKnown RBP9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 CRIP2P52943 208 aaPredicted RBP9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 LINC00526Q96FQ7 95 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 DSPP15924 2871 aaKnown RBP9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 ATRQ13535 2644 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 ELANEP08246 267 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 H0YGX0 51 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 TIMM17BO60830 172 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 P0DMU3 169 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 FAM231AP0DMU4 169 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 FAM231CP0DMU5 169 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 LMO4P61968 165 aa9.17□□□□□ -0.94
TSPAN9-201ENST00000011898 HHLA3Q9XRX5 114 aa9.16□□□□□ -0.94
TSPAN9-201ENST00000011898 A0A0J9YXY3 114 aa9.16□□□□□ -0.94
TSPAN9-201ENST00000011898 LINC01619G3V211 115 aa9.16□□□□□ -0.94
TSPAN9-201ENST00000011898 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
TSPAN9-201ENST00000011898 FSTL3O95633 263 aa9.16□□□□□ -0.94
TSPAN9-201ENST00000011898 TIMM17AQ99595 171 aa9.16□□□□□ -0.94
TSPAN9-201ENST00000011898 CENPEQ02224 2701 aa9.15□□□□□ -0.94
TSPAN9-201ENST00000011898 NEXN-AS1Q8NBZ9 246 aa9.15□□□□□ -0.95
TSPAN9-201ENST00000011898 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.95
TSPAN9-201ENST00000011898 RETNQ9HD89 108 aa9.15□□□□□ -0.95
TSPAN9-201ENST00000011898 TRBV30A0A0K0K1B3 111 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 Q6ZS46 218 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 C20orf173Q96LM9 149 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 MDFICQ9P1T7 246 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 SNURFQ9Y675 71 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 COX7A2LO14548 114 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 SEC61GP60059 68 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 CELSR3Q9NYQ7 3312 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 SMAD5-AS1Q9Y6J3 95 aa9.14□□□□□ -0.95
TSPAN9-201ENST00000011898 IGHV3-30P01768 117 aa9.13□□□□□ -0.95
TSPAN9-201ENST00000011898 IGHV3-30-5P0DP03 117 aa9.13□□□□□ -0.95
TSPAN9-201ENST00000011898 CMC4P56277 68 aaPredicted RBP9.13□□□□□ -0.95
TSPAN9-201ENST00000011898 EBI3Q14213 229 aa9.13□□□□□ -0.95
TSPAN9-201ENST00000011898 ENHOQ6UWT2 76 aa9.13□□□□□ -0.95
TSPAN9-201ENST00000011898 J3QLI3 93 aa9.13□□□□□ -0.95
TSPAN9-201ENST00000011898 TNFRSF13BO14836 293 aaPredicted RBP9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 IGF1P05019 195 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 C11orf71Q6IPW1 123 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 CFHR3Q02985 330 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 MIAQ16674 131 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 VSIG2Q96IQ7 327 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 TET2Q6N021 2002 aaPredicted RBP9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 H7C423 109 aa9.12□□□□□ -0.95
TSPAN9-201ENST00000011898 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
TSPAN9-201ENST00000011898 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
TSPAN9-201ENST00000011898 IGHV1-58A0A0C4DH39 117 aa9.11□□□□□ -0.95
TSPAN9-201ENST00000011898 K7EMT4 169 aa9.1□□□□□ -0.95
TSPAN9-201ENST00000011898 UBE2D1P51668 147 aa9.1□□□□□ -0.95
TSPAN9-201ENST00000011898 GPHB5Q86YW7 130 aa9.1□□□□□ -0.95
TSPAN9-201ENST00000011898 IGSF10Q6WRI0 2623 aa9.1□□□□□ -0.95
TSPAN9-201ENST00000011898 A0A087WVE0 104 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 UBE2D3P61077 147 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 UBE2D2P62837 147 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 RNF185Q96GF1 192 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 SLURP1P55000 103 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 CEMP1Q6PRD7 247 aaPredicted RBP9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 U3KQK5 164 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 MED14OSP0DP75 135 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 LST1O00453 97 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 TIRAPP58753 221 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 SOSTDC1Q6X4U4 206 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 APRG1Q8IVJ8 170 aa9.09□□□□□ -0.95
TSPAN9-201ENST00000011898 MGAM2Q2M2H8 2515 aa9.08□□□□□ -0.96
TSPAN9-201ENST00000011898 DPH3Q96FX2 82 aa9.08□□□□□ -0.96
TSPAN9-201ENST00000011898 LOC400499M0QZD8 3231 aa9.08□□□□□ -0.96
TSPAN9-201ENST00000011898 SS18Q15532 418 aa9.08□□□□□ -0.96
TSPAN9-201ENST00000011898 C4orf26Q17RF5 130 aa9.08□□□□□ -0.96
TSPAN9-201ENST00000011898 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
TSPAN9-201ENST00000011898 A0A096LNJ9 63 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 A0A1W2PPR1 153 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 CXCL5P42830 114 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 IGHV4OR15-8A0A075B7B6 117 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 A0A087WW49 117 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 C20orf203Q8NBC4 194 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 PRO0628Q9UI54 55 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 NCR3O14931 201 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 Q8N6K4 173 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 A6NDX4 124 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 SLPIP03973 132 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 FUSP35637 526 aaKnown RBP eCLIP9.07□□□□□ -0.963e-6■■■■□ 19.6
TSPAN9-201ENST00000011898 MIR7-3HGQ8N6C7 128 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 C11orf21Q9P2W6 132 aa9.07□□□□□ -0.96
TSPAN9-201ENST00000011898 HELZ2Q9BYK8 2649 aaKnown RBP9.06□□□□□ -0.96
TSPAN9-201ENST00000011898 IGHV4-28A0A0C4DH34 117 aa9.06□□□□□ -0.96
TSPAN9-201ENST00000011898 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
TSPAN9-201ENST00000011898 HIST2H2BDQ6DRA6 164 aa9.06□□□□□ -0.96
TSPAN9-201ENST00000011898 ZFAND2AQ8N6M9 145 aa9.06□□□□□ -0.96
TSPAN9-201ENST00000011898 A0A0J9YX75 114 aa9.06□□□□□ -0.96
TSPAN9-201ENST00000011898 SCXQ7RTU7 201 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms