RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Foxh1O88621 401 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Lyzl1Q9CPX3 148 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Spata45Q9CVW4 97 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Iqcf6G3UWF2 157 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Tmem171Q4KL18 322 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Ypel2Q65Z95 119 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Rnf151Q9CQ29 239 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Ypel1Q9ESC7 118 aa11.65□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Trav8-1A0A075B641 109 aa11.65□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm29289A0A087WPY7 166 aa11.65□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm4064A0A087WR82 380 aa11.65□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm10352B2RWR6 380 aa11.65□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm21693J3QK27 380 aa11.65□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Rbmy1a1O35698 380 aa11.65□□□□□ -0.55
Col3a1-201ENSMUST00000087883 P01634 136 aa11.65□□□□□ -0.55
Col3a1-201ENSMUST00000087883 NynrinQ5DTZ0 1840 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 NrtnP97463 195 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Wbp1P97764 304 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 YrdcQ3U5F4 280 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Susd3Q9D176 269 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 KncnQ307W7 124 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Wdr83osQ6ZWX0 106 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm9944Q8C559 102 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Dtx2Q8R3P2 619 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Il3raP26952 396 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Mllt11P97783 90 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Trav3-1Q5R1I8 114 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 GalmQ8K157 342 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Rnf126Q91YL2 313 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Mfap4Q9D1H9 257 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Znf319Q9ERR8 581 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Trav21-dv12A0A075B6C4 109 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Siglec15A7E1W8 342 aa11.64□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Trdv5A0A075B661 115 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Pth2Q91W27 100 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Tex36Q9D5N9 219 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 CklfQ9DAS1 152 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Igkv6-32A0A140T8N9 115 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Prss41Q920S2 322 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Higd1bQ99JY6 98 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Phpt1Q9DAK9 124 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Atad5Q4QY64 1826 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Ighv1-67A0A0G2JFN9 117 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Fndc7A2AED3 737 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 B230104I21RikQ3USW4 141 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 GlmpQ9JHJ3 404 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Csf2rb2P26954 878 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm21370Q3T9V6 190 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Tmem91Q8C581 172 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Plpp2Q9DAX2 276 aa11.63□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm29644A0A087WPG2 191 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 eef1akmt3D3YWP0 232 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 ApohQ01339 345 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Pate4Q09098 99 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Spred3Q6P6N5 408 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Mrpl16Q99N93 251 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Ormdl2Q9CQZ0 153 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 QrfpQ8CE23 124 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Vmn1r197Q8R265 298 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Ube2cQ9D1C1 179 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Zdhhc16Q9ESG8 361 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Tcrg-V6A0A075B5Y8 134 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Mbnl2Q8C181 373 aaKnown RBP11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 3100002H09RikQ9CXW6 140 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Slc25a15Q9WVD5 301 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Znf385cA2A5E6 429 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 PspnO70300 156 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Ubald2Q8BQH4 164 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 C1qtnf9Q4ZJN1 333 aa11.62□□□□□ -0.55
Col3a1-201ENSMUST00000087883 1700031F05RikB1AX30 191 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm27021M0QWE2 156 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Efna2P52801 209 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gm11110Q3U4K9 109 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Trav16d-dv11A0A075B617 117 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Supt4h1aP63271 117 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Gtsf1lQ9CWD0 151 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Crim1Q9JLL0 1037 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Trbv13-3A0A0B4J1H2 113 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Ca2P00920 260 aaKnown RBP11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Hist2h2beQ64524 126 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Cdk2ap2Q9CPY4 127 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Polr3kQ9CQZ7 108 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Pcm1Q9R0L6 2025 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Ighv5-6A0A075B5Q0 117 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Atp5iQ06185 71 aaKnown RBP11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Defa26Q3L180 93 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 CompQ9R0G6 755 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Zfp646Q6NV66 1788 aa11.61□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Tmem29A2ANF5 204 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Cd69P37217 199 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Srsf6Q3TWW8 339 aaKnown RBP11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 RflnaQ7TS73 204 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Lrrc25Q8K1T1 297 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Taf1Q80UV9 1891 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Igkv4-71A0A0G2JEH0 117 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Tmem256Q5F285 113 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Rnf115Q9D0C1 305 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Trav4-4-dv10A0A075B651 110 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Col9a1Q05722 921 aa11.6□□□□□ -0.55
Col3a1-201ENSMUST00000087883 Foxg1Q60987 481 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms