RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 1110002E22RikE0CYV9 1786 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1098A2AVB0 315 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cldn34c3J3QJW5 233 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cldn34c2J3QNM1 233 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Icam2P35330 277 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ppp1r3cQ7TMB3 317 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1181Q7TR18 311 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ifna14Q810G3 189 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cldn34c1Q8K193 234 aa9.33□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cnih1O35372 144 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 P18530 117 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ms4a13Q5FWC3 203 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 MturnQ8CGA4 131 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Slc16a4Q8R0M8 500 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Zfp53Q9Z117 652 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ighv7-3A0A075B5R2 120 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Trav23A0A0G2JG17 115 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Lbhd2G3UW55 114 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 OstcQ78XF5 149 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1242Q8VGM6 306 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ap5s1Q9D742 170 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm20825J3QM67 227 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ssty2Q149W4 227 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm21394Q497R7 227 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm11232Q5SPI8 295 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm20854Q62461 227 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr823Q7TRH2 315 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr824Q8VFU4 315 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr491Q8VG06 310 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1024A2ASU7 327 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Tm4sf19E9Q9H8 206 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm9242J3QNY1 357 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Srsf6Q3TWW8 339 aaKnown RBP9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Zfp92Q62396 488 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1419Q7TQS2 343 aa9.32□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Shisa6Q3UH99 525 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Myo15aQ9QZZ4 3511 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Rnf212bD3Z423 297 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1331K7N684 317 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ccl2P10148 148 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Bsph2Q0Q236 131 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Rtl4Q3URY0 304 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Bsph1Q3UW26 133 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1333Q7TQV7 317 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Leprotl1Q9CQ74 131 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm21775J3KMK6 180 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Spem1Q5F289 310 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 SeleQ00690 612 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Celsr1O35161 3034 aa9.31□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Wipf2Q6PEV3 440 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Esp38A8R0X1 80 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Vmn1r1E9PVR6 306 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm21900J3QP38 180 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Q497N7 227 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1402Q8VET1 320 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1195Q8VG21 308 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Malsu1Q9CWV0 228 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ube2l6Q9QZU9 153 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Tet1Q3URK3 2007 aaKnown RBP9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 H2al1jA2BFR3 109 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Smim13E9Q942 88 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Scgb1b19F6WYW0 93 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ramp3Q9WUP1 147 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Vma21-psA0A140T8R2 101 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 C2cd4aE9Q861 334 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Mmp23O88676 391 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr1382Q7TQT3 311 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Klk15Q8CGR4 254 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cox19Q8K0C8 92 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Mrps18cQ8R2L5 143 aaKnown RBP9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Mixl1Q9WUI0 231 aa9.3□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Trbv13-3A0A0B4J1H2 113 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 MsmpB1AWI6 139 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 SelenotP62342 195 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 SlpiP97430 131 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Olfr411Q7TRW8 315 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Mrps36Q9CQX8 102 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Q9D8L0 127 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 MgaA2AWL7 3003 aaKnown RBP9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 PtprbB2RU80 1998 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 VcanQ62059 3357 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Klf17Q8CFA7 341 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gtf2h5Q8K2X8 71 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Trav7n-4A0A075B620 113 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Igkv14-111A0A140T8P9 117 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 A730046J19RikA0A1B0GSN8 89 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Gm6970F7DCP6 221 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Tnfaip6O08859 275 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Foxl1Q64731 336 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Ifi27Q8C6G0 260 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 DmdP11531 3678 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Zfp976E9Q981 636 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cox6a1P43024 111 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Fabp6P51162 128 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 V1rd19Q3KNP5 305 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Spred3Q6P6N5 408 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cypt1Q8CH20 168 aa9.29□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Pilrb2Q2YFS1 225 aa9.28□□□□□ -0.92
Topbp1-201ENSMUST00000035164 Cox7a2lQ61387 111 aa9.28□□□□□ -0.92
Topbp1-201ENSMUST00000035164 MavsQ8VCF0 503 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 80.7 ms