RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B YIL108WP40483 696 aaKnown RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B YFL052WP43551 465 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B GIR2Q03768 265 aaPredicted RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B ARA2Q04212 335 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B ECM38Q05902 660 aaPredicted RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B PFK1P16861 987 aaKnown RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B HCM1P25364 564 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B SEC65P29478 273 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B YPT10P38146 199 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B MUP3P38734 546 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B PLB1P39105 664 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B NPA3P47122 385 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B MTR3P48240 250 aaPredicted RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B RFX1P48743 811 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B YNL018CP53976 612 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B GIS1Q03833 894 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B HBT1Q07653 1046 aaKnown RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B APL5Q08951 932 aaKnown RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B RED1P14291 827 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B PHO3P24031 467 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B DGR2P32330 852 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B YIL166CP40445 542 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B MRPL13Q02204 264 aa2.03□□□□□ -2.08
YOR343W-BYOR343W-B LRS4Q04087 347 aaKnown RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B MRD1Q06106 887 aaKnown RBP2.03□□□□□ -2.08
YOR343W-BYOR343W-B IMG2P25642 146 aaPredicted RBP2.03□□□□□ -2.09
YOR343W-BYOR343W-B YJU2P28320 278 aaPredicted RBP2.03□□□□□ -2.09
YOR343W-BYOR343W-B MRS6P32864 603 aaKnown RBP2.03□□□□□ -2.09
YOR343W-BYOR343W-B GPB2P39717 880 aa2.03□□□□□ -2.09
YOR343W-BYOR343W-B YEN1P40028 759 aa2.03□□□□□ -2.09
YOR343W-BYOR343W-B DOT6P40059 670 aaKnown RBP2.03□□□□□ -2.09
YOR343W-BYOR343W-B VID28P40547 921 aa2.03□□□□□ -2.09
YOR343W-BYOR343W-B PSP1P50896 841 aaKnown RBP2.03□□□□□ -2.09
YOR343W-BYOR343W-B YPL108WQ02872 168 aaPredicted RBP2.03□□□□□ -2.09
YOR343W-BYOR343W-B YML131WQ03102 365 aa2.03□□□□□ -2.09
YOR343W-BYOR343W-B MTG1Q03151 367 aaPredicted RBP2.03□□□□□ -2.09
YOR343W-BYOR343W-B BLS1Q06071 122 aa2.03□□□□□ -2.09
YOR343W-BYOR343W-B RPL7AP05737 244 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B SEC12P11655 471 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B SRP54P20424 541 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B PCL6P40038 420 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B RPT2P40327 437 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B CFD1P40558 293 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B GTS1P40956 396 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B PRY1P47032 299 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B YGR054WP53235 642 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B RPM2Q02773 1202 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B PRP3Q03338 469 aaPredicted RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B RTT103Q05543 409 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B RKI1Q12189 258 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B RPL7BQ12213 244 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B PRC1P00729 532 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B THR1P17423 357 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B STE50P25344 346 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B GEX1P25596 615 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B PRP19P32523 503 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B SRP101P32916 621 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B MIA40P36046 403 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B UBS1P38290 277 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B DSS1P39112 969 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B SPC72P39723 622 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B KHA1P40309 873 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B SAP4P53036 818 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B TSR2Q06672 205 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B RIX7Q07844 837 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B IRC10Q08118 586 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B PHR1P05066 565 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
YOR343W-BYOR343W-B MRE11P32829 692 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B BCS1P32839 456 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B GRX7P38068 203 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B YEL025CP39991 1188 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B GET2P40056 285 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B EFR3Q03653 782 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B NDL1Q06568 189 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B YCG1Q06680 1035 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B YOR352WQ08816 343 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B ARP6Q12509 438 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B HXT4P32467 576 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B PAH1P32567 862 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B DSS4P32601 143 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B AIM26P32858 118 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B MSS4P38994 779 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B AIM21P40563 679 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B MSE1P48525 536 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B ARC35P53731 342 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B SQS1P53866 767 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B MDG1P53885 366 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B NGL2Q03264 515 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B YAP6Q03935 383 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B ECI1Q05871 280 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B NUS1Q12063 375 aa2.02□□□□□ -2.09
YOR343W-BYOR343W-B RPN5Q12250 445 aaKnown RBP2.02□□□□□ -2.09
YOR343W-BYOR343W-B STE4P18851 423 aa2.01□□□□□ -2.09
YOR343W-BYOR343W-B BET2P20133 325 aa2.01□□□□□ -2.09
YOR343W-BYOR343W-B PRI2P20457 528 aa2.01□□□□□ -2.09
YOR343W-BYOR343W-B FUI1P38196 639 aa2.01□□□□□ -2.09
YOR343W-BYOR343W-B NDC80P40460 691 aa2.01□□□□□ -2.09
YOR343W-BYOR343W-B SDS3P40505 327 aa2.01□□□□□ -2.09
YOR343W-BYOR343W-B NMA2P53204 395 aa2.01□□□□□ -2.09
YOR343W-BYOR343W-B APM1Q00776 475 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms