RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	ECM32	P32644	1121 aa	Known RBP	11.96	□□□□□ -0.49
DED1	YOR204W	OTU2	P38747	307 aa	Known RBP	11.96	□□□□□ -0.49
DED1	YOR204W	YEL028W	P39989	153 aa		11.96	□□□□□ -0.49
DED1	YOR204W	PSP1	P50896	841 aa	Known RBP	11.96	□□□□□ -0.49
DED1	YOR204W	YMR160W	Q03823	816 aa		11.96	□□□□□ -0.49
DED1	YOR204W	AVL9	Q12500	764 aa		11.96	□□□□□ -0.49
DED1	YOR204W	HIS1	P00498	297 aa	Known RBP	11.95	□□□□□ -0.5
DED1	YOR204W	SPO16	P17122	198 aa		11.95	□□□□□ -0.5
DED1	YOR204W	UTR2	P32623	467 aa		11.95	□□□□□ -0.5
DED1	YOR204W	CKB2	P38930	258 aa		11.95	□□□□□ -0.5
DED1	YOR204W	MOB1	P40484	314 aa		11.95	□□□□□ -0.5
DED1	YOR204W	INA22	P40576	216 aa		11.95	□□□□□ -0.5
DED1	YOR204W	MVP1	P40959	511 aa	Known RBP	11.95	□□□□□ -0.5
DED1	YOR204W	UFE1	P41834	346 aa		11.95	□□□□□ -0.5
DED1	YOR204W	RTT101	P47050	842 aa		11.95	□□□□□ -0.5
DED1	YOR204W	CDC73	Q06697	393 aa		11.95	□□□□□ -0.5
DED1	YOR204W	SPE3	Q12074	293 aa	Known RBP	11.95	□□□□□ -0.5
DED1	YOR204W	MNN11	P46985	422 aa	Known RBP	11.95	□□□□□ -0.5
DED1	YOR204W	TAN1	P53072	289 aa	Predicted RBP	11.95	□□□□□ -0.5
DED1	YOR204W	RPL22B	P56628	122 aa	Known RBP	11.95	□□□□□ -0.5
DED1	YOR204W	RAD1	P06777	1100 aa		11.94	□□□□□ -0.5
DED1	YOR204W	RPB2	P08518	1224 aa	Known RBP	11.94	□□□□□ -0.5
DED1	YOR204W	LTV1	P34078	463 aa		11.94	□□□□□ -0.5
DED1	YOR204W	YIL161W	P40449	235 aa	Known RBP	11.94	□□□□□ -0.5
DED1	YOR204W	VPS9	P54787	451 aa		11.94	□□□□□ -0.5
DED1	YOR204W	ECM38	Q05902	660 aa	Predicted RBP	11.94	□□□□□ -0.5
DED1	YOR204W	SEY1	Q99287	776 aa		11.94	□□□□□ -0.5
DED1	YOR204W	ARG4	P04076	463 aa	Predicted RBP	11.93	□□□□□ -0.5
DED1	YOR204W	TAH11	P47112	604 aa		11.93	□□□□□ -0.5
DED1	YOR204W	TRF5	P48561	642 aa	Known RBP	11.93	□□□□□ -0.5
DED1	YOR204W	SWC7	Q06707	132 aa		11.93	□□□□□ -0.5
DED1	YOR204W	HEM15	P16622	393 aa		11.93	□□□□□ -0.5
DED1	YOR204W	CDC20	P26309	610 aa		11.93	□□□□□ -0.5
DED1	YOR204W	SEC6	P32844	805 aa		11.93	□□□□□ -0.5
DED1	YOR204W	COP1	P53622	1201 aa	Known RBP	11.93	□□□□□ -0.5
DED1	YOR204W	PML39	Q03760	334 aa		11.93	□□□□□ -0.5
DED1	YOR204W	ARP9	Q05123	467 aa		11.93	□□□□□ -0.5
DED1	YOR204W	YCS4	Q06156	1176 aa		11.93	□□□□□ -0.5
DED1	YOR204W	MPC54	Q08550	464 aa		11.93	□□□□□ -0.5
DED1	YOR204W	PYC1	P11154	1178 aa	Known RBP	11.92	□□□□□ -0.5
DED1	YOR204W	RAD5	P32849	1169 aa	Predicted RBP	11.92	□□□□□ -0.5
DED1	YOR204W	NFU1	P32860	256 aa		11.92	□□□□□ -0.5
DED1	YOR204W	KTR4	P38131	464 aa		11.92	□□□□□ -0.5
DED1	YOR204W	YAT2	P40017	923 aa		11.92	□□□□□ -0.5
DED1	YOR204W	MND2	P40577	368 aa		11.92	□□□□□ -0.5
DED1	YOR204W	YJR079W	P47126	109 aa		11.92	□□□□□ -0.5
DED1	YOR204W	ASN2	P49090	572 aa	Known RBP	11.92	□□□□□ -0.5
DED1	YOR204W	CPR6	P53691	371 aa	Known RBP	11.92	□□□□□ -0.5
DED1	YOR204W	INP2	Q03824	705 aa		11.92	□□□□□ -0.5
DED1	YOR204W	SFH1	Q06168	426 aa		11.92	□□□□□ -0.5
DED1	YOR204W	YDL073W	Q07454	984 aa		11.92	□□□□□ -0.5
DED1	YOR204W	AFI1	Q99222	893 aa		11.92	□□□□□ -0.5
DED1	YOR204W	CCH1	P50077	2039 aa		11.92	□□□□□ -0.5
DED1	YOR204W	SIR1	P21691	654 aa		11.91	□□□□□ -0.5
DED1	YOR204W	RAM1	P22007	431 aa		11.91	□□□□□ -0.5
DED1	YOR204W	MSR1	P38714	643 aa		11.91	□□□□□ -0.5
DED1	YOR204W	CCT2	P39076	527 aa	Known RBP	11.91	□□□□□ -0.5
DED1	YOR204W	SCC4	P40090	624 aa		11.91	□□□□□ -0.5
DED1	YOR204W	SMX2	P40204	77 aa	Known RBP	11.91	□□□□□ -0.5
DED1	YOR204W	OYE3	P41816	400 aa	Predicted RBP	11.91	□□□□□ -0.5
DED1	YOR204W	PRP24	P49960	444 aa	Known RBP	11.91	□□□□□ -0.5
DED1	YOR204W	ADI1	Q03677	179 aa		11.91	□□□□□ -0.5
DED1	YOR204W	NRT1	Q08485	598 aa		11.91	□□□□□ -0.5
DED1	YOR204W	PSE1	P32337	1089 aa	Known RBP	11.9	□□□□□ -0.5
DED1	YOR204W	PTC3	P34221	468 aa	Known RBP	11.9	□□□□□ -0.5
DED1	YOR204W	MUD2	P36084	527 aa	Known RBP	11.9	□□□□□ -0.5
DED1	YOR204W	ALA1	P40825	983 aa	Known RBP	11.9	□□□□□ -0.5
DED1	YOR204W	BST1	P43571	1029 aa		11.9	□□□□□ -0.5
DED1	YOR204W	TIM13	P53299	105 aa		11.9	□□□□□ -0.5
DED1	YOR204W	COG6	P53959	839 aa		11.9	□□□□□ -0.5
DED1	YOR204W	NSE5	Q03718	556 aa		11.9	□□□□□ -0.5
DED1	YOR204W	GRX8	Q05926	109 aa		11.9	□□□□□ -0.5
DED1	YOR204W	OCA6	Q12454	224 aa		11.9	□□□□□ -0.5
DED1	YOR204W	COX5A	P00424	153 aa		11.9	□□□□□ -0.5
DED1	YOR204W	IMA3	P0CW40	589 aa		11.9	□□□□□ -0.5
DED1	YOR204W	IMA4	P0CW41	589 aa		11.9	□□□□□ -0.5
DED1	YOR204W	TSR4	P25040	408 aa		11.9	□□□□□ -0.5
DED1	YOR204W	YKR023W	P36119	530 aa	Known RBP	11.9	□□□□□ -0.5
DED1	YOR204W	KAP104	P38217	918 aa	Known RBP	11.9	□□□□□ -0.5
DED1	YOR204W	YFL012W	P43580	148 aa		11.9	□□□□□ -0.5
DED1	YOR204W	YJR039W	P47107	1121 aa		11.9	□□□□□ -0.5
DED1	YOR204W	SLU7	Q02775	382 aa	Known RBP	11.9	□□□□□ -0.5
DED1	YOR204W	IMA2	Q08295	589 aa		11.9	□□□□□ -0.5
DED1	YOR204W	TEF1	P02994	458 aa	Known RBP	11.89	□□□□□ -0.51
DED1	YOR204W	GID7	P25569	745 aa		11.89	□□□□□ -0.51
DED1	YOR204W	YHR131C	P38835	850 aa		11.89	□□□□□ -0.51
DED1	YOR204W	GND2	P53319	492 aa		11.89	□□□□□ -0.51
DED1	YOR204W	DOS2	P54858	310 aa		11.89	□□□□□ -0.51
DED1	YOR204W	LEE1	Q02799	301 aa	Known RBP	11.89	□□□□□ -0.51
DED1	YOR204W	YMR027W	Q04371	470 aa		11.89	□□□□□ -0.51
DED1	YOR204W	ADH4	P10127	382 aa		11.88	□□□□□ -0.51
DED1	YOR204W	PMI40	P29952	429 aa	Known RBP	11.88	□□□□□ -0.51
DED1	YOR204W	MRS6	P32864	603 aa	Known RBP	11.88	□□□□□ -0.51
DED1	YOR204W	COY1	P34237	679 aa		11.88	□□□□□ -0.51
DED1	YOR204W	ATG12	P38316	186 aa		11.88	□□□□□ -0.51
DED1	YOR204W	YJL132W	P47014	750 aa		11.88	□□□□□ -0.51
DED1	YOR204W	URB2	P47108	1174 aa		11.88	□□□□□ -0.51
DED1	YOR204W	MRX6	P48564	524 aa		11.88	□□□□□ -0.51
DED1	YOR204W	USA1	Q03714	838 aa		11.88	□□□□□ -0.51
DED1	YOR204W	FRA1	Q07825	749 aa		11.88	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 89.6 ms