RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	SLK19	Q08581	821 aa	Known RBP	5.28	□□□□□ -1.56
CDA2	YLR308W	YPL216W	Q08964	1102 aa		5.28	□□□□□ -1.56
CDA2	YLR308W	VAS1	P07806	1104 aa	Known RBP	5.27	□□□□□ -1.57
CDA2	YLR308W	AAD3	P25612	363 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	CNE1	P27825	502 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	ORC2	P32833	620 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	DHR2	P36009	735 aa	Predicted RBP	5.27	□□□□□ -1.57
CDA2	YLR308W	LRO1	P40345	661 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	QRI7	P43122	407 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	TAX4	P47030	604 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	YGR021W	P53212	290 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	YOL114C	Q12322	202 aa		5.27	□□□□□ -1.57
CDA2	YLR308W	PCK1	P10963	549 aa		5.26	□□□□□ -1.57
CDA2	YLR308W	YHL041W	P38730	149 aa		5.26	□□□□□ -1.57
CDA2	YLR308W	PIH1	P38768	344 aa		5.26	□□□□□ -1.57
CDA2	YLR308W	MNT2	P53059	558 aa		5.26	□□□□□ -1.57
CDA2	YLR308W	CPR8	P53728	308 aa		5.26	□□□□□ -1.57
CDA2	YLR308W	RPS15	Q01855	142 aa	Known RBP	5.26	□□□□□ -1.57
CDA2	YLR308W	ZPS1	Q12512	249 aa		5.26	□□□□□ -1.57
CDA2	YLR308W	LEU2	P04173	364 aa	Predicted RBP	5.25	□□□□□ -1.57
CDA2	YLR308W	CRD1	Q07560	283 aa		5.25	□□□□□ -1.57
CDA2	YLR308W	NUP1	P20676	1076 aa		5.24	□□□□□ -1.57
CDA2	YLR308W	CBP3	P21560	335 aa		5.24	□□□□□ -1.57
CDA2	YLR308W	YJL193W	P39542	402 aa		5.24	□□□□□ -1.57
CDA2	YLR308W	SCS2	P40075	244 aa	Known RBP	5.24	□□□□□ -1.57
CDA2	YLR308W	SAP185	P40856	1058 aa		5.24	□□□□□ -1.57
CDA2	YLR308W	CPA2	P03965	1118 aa	Known RBP	5.23	□□□□□ -1.57
CDA2	YLR308W	PIF1	P07271	859 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	MIS1	P09440	975 aa	Known RBP	5.23	□□□□□ -1.57
CDA2	YLR308W	VPS33	P20795	691 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	MRPL36	P36531	177 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	FUI1	P38196	639 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
CDA2	YLR308W	SWD1	P39706	426 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	ACA1	P39970	489 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	RIM13	Q03792	727 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	YDL073W	Q07454	984 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	AI5_ALPHA	Q9ZZX1	630 aa		5.23	□□□□□ -1.57
CDA2	YLR308W	SEC3	P33332	1336 aa	Known RBP	5.23	□□□□□ -1.57
CDA2	YLR308W	MSS18	P08593	268 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	MSM1	P22438	575 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	CAP1	P28495	268 aa	Known RBP	5.22	□□□□□ -1.57
CDA2	YLR308W	APM3	P38153	483 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	MAD2	P40958	196 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	COQ6	P53318	479 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	YNR071C	P53757	342 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	ARA2	Q04212	335 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	HOF1	Q05080	669 aa		5.22	□□□□□ -1.57
CDA2	YLR308W	BRE1	Q07457	700 aa	Known RBP	5.22	□□□□□ -1.57
CDA2	YLR308W	DBP10	Q12389	995 aa	Known RBP	5.22	□□□□□ -1.57
CDA2	YLR308W	PMA2	P19657	947 aa		5.21	□□□□□ -1.58
CDA2	YLR308W	ARG1	P22768	420 aa		5.21	□□□□□ -1.58
CDA2	YLR308W	TRX2	P22803	104 aa	Known RBP	5.21	□□□□□ -1.58
CDA2	YLR308W	SWC3	P31376	625 aa		5.21	□□□□□ -1.58
CDA2	YLR308W	SAP4	P53036	818 aa		5.21	□□□□□ -1.58
CDA2	YLR308W	CEG1	Q01159	459 aa	Predicted RBP	5.21	□□□□□ -1.58
CDA2	YLR308W	BLS1	Q06071	122 aa		5.21	□□□□□ -1.58
CDA2	YLR308W	RTK1	Q12100	620 aa	Predicted RBP	5.21	□□□□□ -1.58
CDA2	YLR308W	RPL7A	P05737	244 aa	Known RBP	5.2	□□□□□ -1.58
CDA2	YLR308W	CTT1	P06115	562 aa		5.2	□□□□□ -1.58
CDA2	YLR308W	RNR3	P21672	869 aa	Known RBP	5.2	□□□□□ -1.58
CDA2	YLR308W	DSS4	P32601	143 aa		5.2	□□□□□ -1.58
CDA2	YLR308W	HOT13	P36078	116 aa		5.2	□□□□□ -1.58
CDA2	YLR308W	YPT10	P38146	199 aa		5.2	□□□□□ -1.58
CDA2	YLR308W	IES5	P40060	125 aa		5.2	□□□□□ -1.58
CDA2	YLR308W	USA1	Q03714	838 aa		5.2	□□□□□ -1.58
CDA2	YLR308W	AAD4	Q07747	329 aa		5.2	□□□□□ -1.58
CDA2	YLR308W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
CDA2	YLR308W	RPL7B	Q12213	244 aa	Known RBP	5.2	□□□□□ -1.58
CDA2	YLR308W	ADH4	P10127	382 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	WHI2	P12611	486 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	PRP45	P28004	379 aa	Predicted RBP	5.19	□□□□□ -1.58
CDA2	YLR308W	XRS2	P33301	854 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	LOT5	P34234	306 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	CCL1	P37366	393 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	VFA1	P40080	203 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	GSM1	P42950	618 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	TGS1	Q12052	315 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	DIN7	Q12086	430 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	SSM4	P40318	1319 aa		5.19	□□□□□ -1.58
CDA2	YLR308W	URA3	P03962	267 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	HEM1	P09950	548 aa	Predicted RBP	5.18	□□□□□ -1.58
CDA2	YLR308W	AQY1	P0CD91	305 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	SIR1	P21691	654 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	STB5	P38699	743 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	NPR3	P38742	1146 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	RAD26	P40352	1085 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	YFL015C	P43578	164 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	IML2	P47031	731 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	CPR6	P53691	371 aa	Known RBP	5.18	□□□□□ -1.58
CDA2	YLR308W	VPS72	Q03388	795 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	VPS64	Q03944	604 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	EIS1	Q05050	843 aa	Known RBP	5.18	□□□□□ -1.58
CDA2	YLR308W	HIM1	Q06674	414 aa		5.18	□□□□□ -1.58
CDA2	YLR308W	IWR1	Q07532	353 aa	Predicted RBP	5.18	□□□□□ -1.58
CDA2	YLR308W	YPK1	P12688	680 aa	Known RBP	5.17	□□□□□ -1.58
CDA2	YLR308W	YJL043W	P47053	257 aa		5.17	□□□□□ -1.58
CDA2	YLR308W	MAD3	P47074	515 aa		5.17	□□□□□ -1.58
CDA2	YLR308W	SEG1	Q04279	960 aa		5.17	□□□□□ -1.58
CDA2	YLR308W	PCL8	Q08966	492 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms