RNA–Protein interactions for RNA: YLR261C

VPS63, Transcript of Putative protein of unknown function, yeast

Gene VPS63, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS63	YLR261C	RPA135	P22138	1203 aa	Known RBP	3.54	□□□□□ -1.84
VPS63	YLR261C	MSH1	P25846	959 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	PPZ2	P33329	710 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	TAF5	P38129	798 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	PIH1	P38768	344 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	STT3	P39007	718 aa	Known RBP	3.54	□□□□□ -1.84
VPS63	YLR261C	RPT2	P40327	437 aa	Known RBP	3.54	□□□□□ -1.84
VPS63	YLR261C	YIL166C	P40445	542 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	NOP2	P40991	618 aa	Known RBP	3.54	□□□□□ -1.84
VPS63	YLR261C	POL31	P46957	487 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	SAP4	P53036	818 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	ZPS1	Q12512	249 aa		3.54	□□□□□ -1.84
VPS63	YLR261C	CPA2	P03965	1118 aa	Known RBP	3.53	□□□□□ -1.84
VPS63	YLR261C	SPO11	P23179	398 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	SAT4	P25333	603 aa	Known RBP	3.53	□□□□□ -1.84
VPS63	YLR261C	ADY2	P25613	283 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	FLO10	P36170	1169 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	YLF2	P38746	405 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	ARB1	P40024	610 aa	Known RBP	3.53	□□□□□ -1.84
VPS63	YLR261C	IDS2	P46958	469 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	CPR8	P53728	308 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	UBX4	P54730	416 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	ARG7	Q04728	441 aa		3.53	□□□□□ -1.84
VPS63	YLR261C	SEC3	P33332	1336 aa	Known RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	LEU2	P04173	364 aa	Predicted RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	ADE3	P07245	946 aa	Known RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	POL3	P15436	1097 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	RNR3	P21672	869 aa	Known RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	MCM3	P24279	971 aa	Known RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	CDC5	P32562	705 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	FRD1	P32614	470 aa	Known RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	PEX2	P32800	271 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	YPT53	P36019	220 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	RIX1	P38883	763 aa	Predicted RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	ERR3	P42222	437 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	COQ6	P53318	479 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	YNL092W	P53934	400 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	APM1	Q00776	475 aa	Predicted RBP	3.52	□□□□□ -1.85
VPS63	YLR261C	YDL073W	Q07454	984 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	CRD1	Q07560	283 aa		3.52	□□□□□ -1.85
VPS63	YLR261C	CTT1	P06115	562 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	WHI2	P12611	486 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	SIR1	P21691	654 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	AAD3	P25612	363 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	YBR138C	P38277	524 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	SDH8	P38345	138 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	ARO9	P38840	513 aa	Predicted RBP	3.51	□□□□□ -1.85
VPS63	YLR261C	ACA1	P39970	489 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	YFL015C	P43578	164 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	FMP30	Q02883	468 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	YML119W	Q03208	357 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	CRF1	Q04930	467 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	PCL8	Q08966	492 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	TGS1	Q12052	315 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	ULA1	Q12059	462 aa		3.51	□□□□□ -1.85
VPS63	YLR261C	RPN13	O13563	156 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	ADE5,7	P07244	802 aa	Known RBP	3.5	□□□□□ -1.85
VPS63	YLR261C	PHO81	P17442	1178 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	VPS34	P22543	875 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	RIT1	P23796	513 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	PRP45	P28004	379 aa	Predicted RBP	3.5	□□□□□ -1.85
VPS63	YLR261C	DBF20	P32328	564 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	UGP1	P32861	499 aa	Known RBP	3.5	□□□□□ -1.85
VPS63	YLR261C	LOT5	P34234	306 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	PAC2	P39937	518 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	VPS27	P40343	622 aa	Known RBP	3.5	□□□□□ -1.85
VPS63	YLR261C	ESF2	P53743	316 aa	Known RBP	3.5	□□□□□ -1.85
VPS63	YLR261C	VPS64	Q03944	604 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	CIA1	Q05583	330 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	ARO10	Q06408	635 aa		3.5	□□□□□ -1.85
VPS63	YLR261C	IWR1	Q07532	353 aa	Predicted RBP	3.5	□□□□□ -1.85
VPS63	YLR261C	AAC1	P04710	309 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	RPL7A	P05737	244 aa	Known RBP	3.49	□□□□□ -1.85
VPS63	YLR261C	TUB1	P09733	447 aa	Known RBP	3.49	□□□□□ -1.85
VPS63	YLR261C	PMA2	P19657	947 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	AMD2	P22580	549 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	YCR061W	P25639	631 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	MRPL9	P31334	269 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	GDA1	P32621	518 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	MTG2	P38860	518 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	VPS8	P39702	1274 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	IES5	P40060	125 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	PUG1	P40100	303 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	CAB2	P40506	365 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	CPR6	P53691	371 aa	Known RBP	3.49	□□□□□ -1.85
VPS63	YLR261C	UBP16	Q02863	499 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	WAR1	Q03631	944 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	EIS1	Q05050	843 aa	Known RBP	3.49	□□□□□ -1.85
VPS63	YLR261C	AIM6	Q07716	390 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	RPL7B	Q12213	244 aa	Known RBP	3.49	□□□□□ -1.85
VPS63	YLR261C	Q0010	Q9ZZX9	128 aa		3.49	□□□□□ -1.85
VPS63	YLR261C	AQY1	P0CD91	305 aa		3.48	□□□□□ -1.85
VPS63	YLR261C	NCP1	P16603	691 aa	Known RBP	3.48	□□□□□ -1.85
VPS63	YLR261C	ARP2	P32381	391 aa	Known RBP	3.48	□□□□□ -1.85
VPS63	YLR261C	FUI1	P38196	639 aa		3.48	□□□□□ -1.85
VPS63	YLR261C	MRK1	P50873	501 aa		3.48	□□□□□ -1.85
VPS63	YLR261C	TAM41	P53230	385 aa		3.48	□□□□□ -1.85
VPS63	YLR261C	ATG16	Q03818	150 aa		3.48	□□□□□ -1.85
VPS63	YLR261C	YML053C	Q04978	212 aa		3.48	□□□□□ -1.85
VPS63	YLR261C	SUL2	Q12325	893 aa		3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms