RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	AHA1	Q12449	350 aa	Known RBP	3.17	□□□□□ -1.9
SPE1	YKL184W	SEC3	P33332	1336 aa	Known RBP	3.16	□□□□□ -1.9
SPE1	YKL184W	CBP3	P21560	335 aa		3.16	□□□□□ -1.9
SPE1	YKL184W	PET309	P32522	965 aa	Predicted RBP	3.16	□□□□□ -1.9
SPE1	YKL184W	YPT10	P38146	199 aa		3.16	□□□□□ -1.9
SPE1	YKL184W	YBR071W	P38243	211 aa		3.16	□□□□□ -1.9
SPE1	YKL184W	LNP1	P38878	278 aa		3.16	□□□□□ -1.9
SPE1	YKL184W	SSP120	P39931	234 aa	Known RBP	3.16	□□□□□ -1.9
SPE1	YKL184W	STL1	P39932	569 aa		3.16	□□□□□ -1.9
SPE1	YKL184W	MTD1	Q02046	320 aa	Known RBP	3.16	□□□□□ -1.9
SPE1	YKL184W	ENT2	Q05785	613 aa		3.16	□□□□□ -1.9
SPE1	YKL184W	RGT2	Q12300	763 aa		3.16	□□□□□ -1.9
SPE1	YKL184W	LAS21	P40367	830 aa		3.15	□□□□□ -1.91
SPE1	YKL184W	BPL1	P48445	690 aa	Predicted RBP	3.15	□□□□□ -1.91
SPE1	YKL184W	MNT2	P53059	558 aa		3.15	□□□□□ -1.91
SPE1	YKL184W	RDL1	Q12305	139 aa	Known RBP	3.15	□□□□□ -1.91
SPE1	YKL184W	TMA17	Q12513	150 aa		3.15	□□□□□ -1.91
SPE1	YKL184W	GSY2	P27472	705 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	GRX4	P32642	244 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	TAF5	P38129	798 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	SDH8	P38345	138 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	MTG2	P38860	518 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	EAF5	P39995	279 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	TDA10	P42938	290 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	MPS1	P54199	764 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	AAT1	Q01802	451 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	YPL071C	Q02864	156 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	TPO3	Q06451	622 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	BSP1	Q06604	576 aa		3.14	□□□□□ -1.91
SPE1	YKL184W	ARG1	P22768	420 aa		3.13	□□□□□ -1.91
SPE1	YKL184W	HEM12	P32347	362 aa	Predicted RBP	3.13	□□□□□ -1.91
SPE1	YKL184W	CDC5	P32562	705 aa		3.13	□□□□□ -1.91
SPE1	YKL184W	IDS2	P46958	469 aa		3.13	□□□□□ -1.91
SPE1	YKL184W	COS12	P53053	380 aa		3.13	□□□□□ -1.91
SPE1	YKL184W	IDP3	P53982	420 aa	Known RBP	3.13	□□□□□ -1.91
SPE1	YKL184W	ECM38	Q05902	660 aa	Predicted RBP	3.13	□□□□□ -1.91
SPE1	YKL184W	CTT1	P06115	562 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	SDS22	P36047	338 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	JHD1	P40034	492 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	MAM1	P40065	302 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	PEX14	P53112	341 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	COG2	P53271	262 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	PSF3	Q12146	194 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	PRS5	Q12265	496 aa	Known RBP	3.12	□□□□□ -1.91
SPE1	YKL184W	FRE7	Q12333	620 aa		3.12	□□□□□ -1.91
SPE1	YKL184W	URA3	P03962	267 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	SPC97	P38863	823 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	VFA1	P40080	203 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	RAD26	P40352	1085 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	CIR1	P42940	261 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	YJR120W	P47157	116 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	YNR071C	P53757	342 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	RSC9	Q03124	581 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	TRI1	Q05024	226 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	PHM6	Q05637	104 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	SPN1	Q06505	410 aa	Predicted RBP	3.11	□□□□□ -1.91
SPE1	YKL184W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
SPE1	YKL184W	PCL8	Q08966	492 aa		3.11	□□□□□ -1.91
SPE1	YKL184W	STB5	P38699	743 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	SAW1	P39735	261 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	MNT3	P40549	630 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	GSM1	P42950	618 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	BST1	P43571	1029 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	IRC7	P43623	340 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	SAE2	P46946	345 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	COG6	P53959	839 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	HRD3	Q05787	833 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	SLX4	Q12098	748 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	PHO3	P24031	467 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	MRC1	P25588	1096 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	SWC3	P31376	625 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	PLC1	P32383	869 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	TFC4	P33339	1025 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	MAD2	P40958	196 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	UBP16	Q02863	499 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	RAD33	Q04231	177 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	CYK3	Q07533	885 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	YOR389W	Q08912	624 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	DIN7	Q12086	430 aa		3.1	□□□□□ -1.91
SPE1	YKL184W	RTK1	Q12100	620 aa	Predicted RBP	3.1	□□□□□ -1.91
SPE1	YKL184W	PNO1	Q99216	274 aa	Known RBP	3.1	□□□□□ -1.91
SPE1	YKL184W	CHO2	P05374	869 aa	Known RBP	3.09	□□□□□ -1.92
SPE1	YKL184W	VAS1	P07806	1104 aa	Known RBP	3.09	□□□□□ -1.92
SPE1	YKL184W	YJU2	P28320	278 aa	Predicted RBP	3.09	□□□□□ -1.92
SPE1	YKL184W	GDA1	P32621	518 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	TGL1	P34163	548 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	PAF1	P38351	445 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	PLM2	Q04383	521 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	MRPL1	Q04599	285 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	CRC1	Q12289	327 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	DBP10	Q12389	995 aa	Known RBP	3.09	□□□□□ -1.92
SPE1	YKL184W	YLR111W	Q12528	110 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	YER175W-A	Q8TGU4	54 aa		3.09	□□□□□ -1.92
SPE1	YKL184W	ILS1	P09436	1072 aa	Known RBP	3.08	□□□□□ -1.92
SPE1	YKL184W	YAP1	P19880	650 aa	Known RBP	3.08	□□□□□ -1.92
SPE1	YKL184W	FOL1	P53848	824 aa		3.08	□□□□□ -1.92
SPE1	YKL184W	GEP3	Q08622	556 aa		3.08	□□□□□ -1.92
SPE1	YKL184W	NUR1	Q12066	484 aa		3.08	□□□□□ -1.92
SPE1	YKL184W	YMR085W	P0CF18	432 aa		3.07	□□□□□ -1.92
SPE1	YKL184W	SCS2	P40075	244 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms