RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	MAD2	P40958	196 aa		3.58	□□□□□ -1.84
VHR1	YIL056W	GSM1	P42950	618 aa		3.58	□□□□□ -1.84
VHR1	YIL056W	YML122C	Q03207	126 aa		3.58	□□□□□ -1.84
VHR1	YIL056W	TRI1	Q05024	226 aa		3.58	□□□□□ -1.84
VHR1	YIL056W	SST2	P11972	698 aa	Known RBP	3.57	□□□□□ -1.84
VHR1	YIL056W	NUP1	P20676	1076 aa		3.57	□□□□□ -1.84
VHR1	YIL056W	THI7	Q05998	598 aa		3.57	□□□□□ -1.84
VHR1	YIL056W	HIM1	Q06674	414 aa		3.57	□□□□□ -1.84
VHR1	YIL056W	DIN7	Q12086	430 aa		3.57	□□□□□ -1.84
VHR1	YIL056W	NDJ1	Q12366	352 aa		3.57	□□□□□ -1.84
VHR1	YIL056W	AHA1	Q12449	350 aa	Known RBP	3.57	□□□□□ -1.84
VHR1	YIL056W	RPL7A	P05737	244 aa	Known RBP	3.56	□□□□□ -1.84
VHR1	YIL056W	RPS7A	P26786	190 aa	Known RBP	3.56	□□□□□ -1.84
VHR1	YIL056W	SWE1	P32944	819 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	FLO10	P36170	1169 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	VPS27	P40343	622 aa	Known RBP	3.56	□□□□□ -1.84
VHR1	YIL056W	OPT1	P40897	799 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	TAX4	P47030	604 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	SAP4	P53036	818 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	ACS1	Q01574	713 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	MRI1	Q06489	411 aa	Known RBP	3.56	□□□□□ -1.84
VHR1	YIL056W	CRT10	Q08226	957 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	RPL7B	Q12213	244 aa	Known RBP	3.56	□□□□□ -1.84
VHR1	YIL056W	YNL162W-A	Q3E7A8	72 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	YMR084W	A2P2R3	262 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	ADH4	P10127	382 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	RPC34	P32910	317 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	SWD1	P39706	426 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	FAF1	P40546	346 aa	Predicted RBP	3.56	□□□□□ -1.84
VHR1	YIL056W	VPS64	Q03944	604 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	ARG7	Q04728	441 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	YOL114C	Q12322	202 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	AI5_ALPHA	Q9ZZX1	630 aa		3.56	□□□□□ -1.84
VHR1	YIL056W	HIS6	P40545	261 aa		3.55	□□□□□ -1.84
VHR1	YIL056W	COS12	P53053	380 aa		3.55	□□□□□ -1.84
VHR1	YIL056W	RPS15	Q01855	142 aa	Known RBP	3.55	□□□□□ -1.84
VHR1	YIL056W	MET14	Q02196	202 aa		3.55	□□□□□ -1.84
VHR1	YIL056W	MLC2	Q06580	163 aa		3.55	□□□□□ -1.84
VHR1	YIL056W	YOL057W	Q08225	711 aa		3.55	□□□□□ -1.84
VHR1	YIL056W	ARP7	Q12406	477 aa		3.55	□□□□□ -1.84
VHR1	YIL056W	SEC3	P33332	1336 aa	Known RBP	3.55	□□□□□ -1.84
VHR1	YIL056W	BI2	P03873	423 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	AAC1	P04710	309 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	MSH1	P25846	959 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	SDH8	P38345	138 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	RRP8	P38961	392 aa	Known RBP	3.54	□□□□□ -1.84
VHR1	YIL056W	TEP1	P53916	434 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	TGL2	P54857	326 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	USA1	Q03714	838 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	ENT2	Q05785	613 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	CRD1	Q07560	283 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	YER175W-A	Q8TGU4	54 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	PTP2	P29461	750 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	SWC3	P31376	625 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	LAS21	P40367	830 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	COG2	P53271	262 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	TRS31	Q03337	283 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	CRF1	Q04930	467 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	COQ11	Q05892	277 aa		3.54	□□□□□ -1.84
VHR1	YIL056W	PHO81	P17442	1178 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	PMA2	P19657	947 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	PRE2	P30656	287 aa	Known RBP	3.53	□□□□□ -1.84
VHR1	YIL056W	CDC5	P32562	705 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	SIP1	P32578	815 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	HOT13	P36078	116 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	YLF2	P38746	405 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	IMA5	P40884	581 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	YFL015C	P43578	164 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	MAD3	P47074	515 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	PIP2	P52960	996 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	ARA2	Q04212	335 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	IRC3	Q06683	689 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	AAD4	Q07747	329 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	OSW1	Q08692	278 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	YOR389W	Q08912	624 aa		3.53	□□□□□ -1.84
VHR1	YIL056W	GAL1	P04385	528 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	APM3	P38153	483 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	YJR008W	P47085	338 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	ATP23	P53722	227 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	ATP4	P05626	244 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	AQY1	P0CD91	305 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	GCD7	P32502	381 aa	Predicted RBP	3.52	□□□□□ -1.85
VHR1	YIL056W	APD1	P38281	316 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	MAM1	P40065	302 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	CAB2	P40506	365 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	RTS3	P53289	263 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	SUB1	P54000	292 aa	Known RBP	3.52	□□□□□ -1.85
VHR1	YIL056W	CEG1	Q01159	459 aa	Predicted RBP	3.52	□□□□□ -1.85
VHR1	YIL056W	UBP16	Q02863	499 aa		3.52	□□□□□ -1.85
VHR1	YIL056W	PTP1	P25044	335 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	YPT10	P38146	199 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	SKP2	P42843	763 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	POL31	P46957	487 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	YPL071C	Q02864	156 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	ATG21	Q02887	496 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	RIM13	Q03792	727 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	SEG1	Q04279	960 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	YML053C	Q04978	212 aa		3.51	□□□□□ -1.85
VHR1	YIL056W	MIS1	P09440	975 aa	Known RBP	3.5	□□□□□ -1.85
VHR1	YIL056W	POL3	P15436	1097 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms