RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C YDL073WQ07454 984 aa13.68□□□□□ -0.22
SHU1YHL006C ERG11P10614 530 aa13.67□□□□□ -0.22
SHU1YHL006C MTF2P10849 440 aa13.67□□□□□ -0.22
SHU1YHL006C DBF4P32325 704 aa13.67□□□□□ -0.22
SHU1YHL006C HXT3P32466 567 aaKnown RBP13.67□□□□□ -0.22
SHU1YHL006C SRX1P36077 127 aa13.67□□□□□ -0.22
SHU1YHL006C WSC4P38739 605 aa13.67□□□□□ -0.22
SHU1YHL006C STL1P39932 569 aa13.67□□□□□ -0.22
SHU1YHL006C SER33P40510 469 aa13.67□□□□□ -0.22
SHU1YHL006C AQR1P53943 586 aa13.67□□□□□ -0.22
SHU1YHL006C UTP5Q04177 643 aaKnown RBP13.67□□□□□ -0.22
SHU1YHL006C IVY1Q04934 453 aa13.67□□□□□ -0.22
SHU1YHL006C GRX8Q05926 109 aa13.67□□□□□ -0.22
SHU1YHL006C IZH4Q99393 312 aa13.67□□□□□ -0.22
SHU1YHL006C MIS1P09440 975 aaKnown RBP13.66□□□□□ -0.22
SHU1YHL006C GFA1P14742 717 aaKnown RBP13.66□□□□□ -0.22
SHU1YHL006C AIM26P32858 118 aa13.66□□□□□ -0.22
SHU1YHL006C PXA2P34230 853 aa13.66□□□□□ -0.22
SHU1YHL006C BLI1P35727 113 aa13.66□□□□□ -0.22
SHU1YHL006C MPE1P35728 441 aaKnown RBP13.66□□□□□ -0.22
SHU1YHL006C HIS2P38635 335 aa13.66□□□□□ -0.22
SHU1YHL006C BAT1P38891 393 aaKnown RBP13.66□□□□□ -0.22
SHU1YHL006C YJR061WP40355 935 aa13.66□□□□□ -0.22
SHU1YHL006C ATG16Q03818 150 aa13.66□□□□□ -0.22
SHU1YHL006C RRP43P25359 394 aaPredicted RBP13.65□□□□□ -0.22
SHU1YHL006C KAR9P32526 644 aa13.65□□□□□ -0.22
SHU1YHL006C TYE7P33122 291 aaPredicted RBP13.65□□□□□ -0.22
SHU1YHL006C ADD66P36040 267 aa13.65□□□□□ -0.22
SHU1YHL006C SRP68P38687 599 aaKnown RBP13.65□□□□□ -0.22
SHU1YHL006C YEL028WP39989 153 aa13.65□□□□□ -0.22
SHU1YHL006C ASN2P49090 572 aaKnown RBP13.65□□□□□ -0.22
SHU1YHL006C NOG2P53742 486 aaKnown RBP13.65□□□□□ -0.22
SHU1YHL006C JJJ1P53863 590 aa13.65□□□□□ -0.22
SHU1YHL006C GPM3Q12326 303 aa13.65□□□□□ -0.22
SHU1YHL006C PEX11Q12462 236 aa13.65□□□□□ -0.22
SHU1YHL006C APM3P38153 483 aa13.64□□□□□ -0.23
SHU1YHL006C RRT2P38332 387 aa13.64□□□□□ -0.23
SHU1YHL006C REF2P42073 533 aaPredicted RBP13.64□□□□□ -0.23
SHU1YHL006C AIM14P53109 570 aa13.64□□□□□ -0.23
SHU1YHL006C YNL247WP53852 767 aaKnown RBP13.64□□□□□ -0.23
SHU1YHL006C YMR187CQ03236 431 aa13.64□□□□□ -0.23
SHU1YHL006C KAP95Q06142 861 aaKnown RBP13.64□□□□□ -0.23
SHU1YHL006C AFI1Q99222 893 aa13.64□□□□□ -0.23
SHU1YHL006C MEI4P29467 408 aa13.63□□□□□ -0.23
SHU1YHL006C TFB1P32776 642 aa13.63□□□□□ -0.23
SHU1YHL006C MIC60P36112 540 aa13.63□□□□□ -0.23
SHU1YHL006C FUI1P38196 639 aa13.63□□□□□ -0.23
SHU1YHL006C PMC1P38929 1173 aaPredicted RBP13.63□□□□□ -0.23
SHU1YHL006C RPS10BP46784 105 aaKnown RBP13.63□□□□□ -0.23
SHU1YHL006C BRO1P48582 844 aa13.63□□□□□ -0.23
SHU1YHL006C EMC4P53073 190 aa13.63□□□□□ -0.23
SHU1YHL006C NRD1P53617 575 aaKnown RBP RIP-Chip data13.63□□□□□ -0.23not detected
SHU1YHL006C UFO1Q04511 668 aa13.63□□□□□ -0.23
SHU1YHL006C YLR001CQ07895 862 aa13.63□□□□□ -0.23
SHU1YHL006C RPS10AQ08745 105 aaPredicted RBP13.63□□□□□ -0.23
SHU1YHL006C DAS2Q12084 232 aa13.63□□□□□ -0.23
SHU1YHL006C CLC1P17891 233 aa13.62□□□□□ -0.23
SHU1YHL006C YCR015CP25616 317 aa13.62□□□□□ -0.23
SHU1YHL006C BIT2P38346 545 aa13.62□□□□□ -0.23
SHU1YHL006C DLD2P46681 530 aaKnown RBP13.62□□□□□ -0.23
SHU1YHL006C PRM1P53835 661 aa13.62□□□□□ -0.23
SHU1YHL006C DIG1Q03063 452 aaKnown RBP13.62□□□□□ -0.23
SHU1YHL006C SOV1Q04748 898 aa13.62□□□□□ -0.23
SHU1YHL006C SWC7Q06707 132 aa13.62□□□□□ -0.23
SHU1YHL006C SST2P11972 698 aaKnown RBP13.61□□□□□ -0.23
SHU1YHL006C PDR1P12383 1068 aa13.61□□□□□ -0.23
SHU1YHL006C MRPL8P22353 238 aa13.61□□□□□ -0.23
SHU1YHL006C RAD57P25301 460 aa13.61□□□□□ -0.23
SHU1YHL006C MCM2P29469 868 aa13.61□□□□□ -0.23
SHU1YHL006C AIM18P38884 321 aa13.61□□□□□ -0.23
SHU1YHL006C SPC72P39723 622 aa13.61□□□□□ -0.23
SHU1YHL006C MNN11P46985 422 aaKnown RBP13.61□□□□□ -0.23
SHU1YHL006C TRF5P48561 642 aaKnown RBP13.61□□□□□ -0.23
SHU1YHL006C YGR127WP53275 312 aa13.61□□□□□ -0.23
SHU1YHL006C PUF3Q07807 879 aaKnown RBP RIP-Chip data13.61□□□□□ -0.23not detected
SHU1YHL006C MIH1P23748 554 aa13.6□□□□□ -0.23
SHU1YHL006C UTH1P36135 365 aa13.6□□□□□ -0.23
SHU1YHL006C YHR078WP38799 552 aa13.6□□□□□ -0.23
SHU1YHL006C ATM1P40416 690 aa13.6□□□□□ -0.23
SHU1YHL006C TCB2P48231 1178 aa13.6□□□□□ -0.23
SHU1YHL006C YGL140CP53120 1219 aa13.6□□□□□ -0.23
SHU1YHL006C NGL3Q03210 505 aa13.6□□□□□ -0.23
SHU1YHL006C RPC11Q04307 110 aaPredicted RBP13.6□□□□□ -0.23
SHU1YHL006C VPS38Q05919 439 aa13.6□□□□□ -0.23
SHU1YHL006C TPO1Q07824 586 aa13.6□□□□□ -0.23
SHU1YHL006C EFG1Q3E705 233 aaKnown RBP13.6□□□□□ -0.23
SHU1YHL006C HXT1P32465 570 aa13.59□□□□□ -0.23
SHU1YHL006C YBL055CP34220 418 aaPredicted RBP13.59□□□□□ -0.23
SHU1YHL006C DCW1P36091 449 aa13.59□□□□□ -0.23
SHU1YHL006C PCH2P38126 564 aa13.59□□□□□ -0.23
SHU1YHL006C RRN7P40992 514 aa13.59□□□□□ -0.23
SHU1YHL006C YJL132WP47014 750 aa13.59□□□□□ -0.23
SHU1YHL006C RFX1P48743 811 aa13.59□□□□□ -0.23
SHU1YHL006C COQ5P49017 307 aa13.59□□□□□ -0.23
SHU1YHL006C YTP1P53584 459 aa13.59□□□□□ -0.23
SHU1YHL006C ORC3P54790 616 aa13.59□□□□□ -0.23
SHU1YHL006C THI7Q05998 598 aa13.59□□□□□ -0.23
SHU1YHL006C OPI10Q08202 246 aa13.59□□□□□ -0.23
SHU1YHL006C SAM4Q08985 325 aaKnown RBP13.59□□□□□ -0.23
SHU1YHL006C FLC2P39719 783 aa13.58□□□□□ -0.24
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms