RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W GEP3Q08622 556 aa4.23□□□□□ -1.73
PRE1YER012W RPL7BQ12213 244 aaKnown RBP4.23□□□□□ -1.73
PRE1YER012W HEM1P09950 548 aaPredicted RBP4.22□□□□□ -1.73
PRE1YER012W VID28P40547 921 aa4.22□□□□□ -1.73
PRE1YER012W MTQ2Q03920 221 aaPredicted RBP4.22□□□□□ -1.73
PRE1YER012W YPL216WQ08964 1102 aa4.22□□□□□ -1.73
PRE1YER012W PRS5Q12265 496 aaKnown RBP4.22□□□□□ -1.73
PRE1YER012W YSP2Q06681 1438 aa4.21□□□□□ -1.73
PRE1YER012W OAF3P36023 863 aa4.21□□□□□ -1.74
PRE1YER012W COQ6P53318 479 aa4.21□□□□□ -1.74
PRE1YER012W ORM2Q06144 216 aa4.21□□□□□ -1.74
PRE1YER012W CIR2Q08822 631 aa4.21□□□□□ -1.74
PRE1YER012W CDC26P14724 124 aa4.2□□□□□ -1.74
PRE1YER012W MRPL9P31334 269 aa4.2□□□□□ -1.74
PRE1YER012W MTC7P32633 139 aa4.2□□□□□ -1.74
PRE1YER012W BEM3P32873 1128 aa4.2□□□□□ -1.74
PRE1YER012W PSA1P41940 361 aaKnown RBP4.2□□□□□ -1.74
PRE1YER012W BPL1P48445 690 aaPredicted RBP4.2□□□□□ -1.74
PRE1YER012W RPS15Q01855 142 aaKnown RBP4.2□□□□□ -1.74
PRE1YER012W GEA1P47102 1408 aaPredicted RBP4.2□□□□□ -1.74
PRE1YER012W RNR3P21672 869 aaKnown RBP4.19□□□□□ -1.74
PRE1YER012W YEL025CP39991 1188 aa4.19□□□□□ -1.74
PRE1YER012W YFL015CP43578 164 aa4.19□□□□□ -1.74
PRE1YER012W YDL183CP48569 320 aa4.19□□□□□ -1.74
PRE1YER012W ORC1P54784 914 aaPredicted RBP4.19□□□□□ -1.74
PRE1YER012W YCG1Q06680 1035 aa4.19□□□□□ -1.74
PRE1YER012W YDL073WQ07454 984 aa4.19□□□□□ -1.74
PRE1YER012W ECM32P32644 1121 aaKnown RBP4.18□□□□□ -1.74
PRE1YER012W HFI1Q12060 488 aa4.18□□□□□ -1.74
PRE1YER012W WHI2P12611 486 aa4.17□□□□□ -1.74
PRE1YER012W RPC34P32910 317 aa4.17□□□□□ -1.74
PRE1YER012W OAF1P39720 1047 aaPredicted RBP4.17□□□□□ -1.74
PRE1YER012W EXO1P39875 702 aa4.17□□□□□ -1.74
PRE1YER012W CEF1Q03654 590 aaPredicted RBP4.17□□□□□ -1.74
PRE1YER012W NSE5Q03718 556 aa4.17□□□□□ -1.74
PRE1YER012W TDA9Q04545 1251 aa4.17□□□□□ -1.74
PRE1YER012W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
PRE1YER012W AIM41Q12032 185 aa4.17□□□□□ -1.74
PRE1YER012W HOP1P20050 605 aa4.16□□□□□ -1.74
PRE1YER012W DHR2P36009 735 aaPredicted RBP4.16□□□□□ -1.74
PRE1YER012W GZF3P42944 551 aaKnown RBP4.16□□□□□ -1.74
PRE1YER012W BST1P43571 1029 aa4.16□□□□□ -1.74
PRE1YER012W SAP4P53036 818 aa4.16□□□□□ -1.74
PRE1YER012W GPG1P53130 126 aa4.16□□□□□ -1.74
PRE1YER012W PTA1Q01329 785 aaPredicted RBP4.16□□□□□ -1.74
PRE1YER012W RSC9Q03124 581 aa4.16□□□□□ -1.74
PRE1YER012W HLR1Q04429 423 aa4.16□□□□□ -1.74
PRE1YER012W ARR3Q06598 404 aa4.16□□□□□ -1.74
PRE1YER012W PCL8Q08966 492 aa4.16□□□□□ -1.74
PRE1YER012W NUP145P49687 1317 aa4.16□□□□□ -1.74
PRE1YER012W HMG2P12684 1045 aa4.15□□□□□ -1.75
PRE1YER012W DAL3P32459 195 aa4.15□□□□□ -1.75
PRE1YER012W RMA1P36001 430 aaKnown RBP4.15□□□□□ -1.75
PRE1YER012W YPT10P38146 199 aa4.15□□□□□ -1.75
PRE1YER012W LRO1P40345 661 aa4.15□□□□□ -1.75
PRE1YER012W NMD5P46970 1048 aa4.15□□□□□ -1.75
PRE1YER012W UME1Q03010 460 aa4.15□□□□□ -1.75
PRE1YER012W VMR1P38735 1592 aa4.14□□□□□ -1.75
PRE1YER012W MF(ALPHA)2P32435 120 aa4.14□□□□□ -1.75
PRE1YER012W HXT4P32467 576 aa4.14□□□□□ -1.75
PRE1YER012W YJR142WP47173 342 aa4.14□□□□□ -1.75
PRE1YER012W WAR1Q03631 944 aa4.14□□□□□ -1.75
PRE1YER012W IRC3Q06683 689 aa4.14□□□□□ -1.75
PRE1YER012W YTM1Q12024 460 aaPredicted RBP4.14□□□□□ -1.75
PRE1YER012W IML1P47170 1584 aa4.14□□□□□ -1.75
PRE1YER012W CAT8P39113 1433 aa4.13□□□□□ -1.75
PRE1YER012W ATP12P22135 325 aa4.13□□□□□ -1.75
PRE1YER012W SER1P33330 395 aaKnown RBP4.13□□□□□ -1.75
PRE1YER012W GPP1P41277 250 aaKnown RBP4.13□□□□□ -1.75
PRE1YER012W MNN11P46985 422 aaKnown RBP4.13□□□□□ -1.75
PRE1YER012W PCK1P10963 549 aa4.12□□□□□ -1.75
PRE1YER012W URE2P23202 354 aaKnown RBP4.12□□□□□ -1.75
PRE1YER012W CAP1P28495 268 aaKnown RBP4.12□□□□□ -1.75
PRE1YER012W DGR2P32330 852 aa4.12□□□□□ -1.75
PRE1YER012W LOT5P34234 306 aa4.12□□□□□ -1.75
PRE1YER012W CCL1P37366 393 aa4.12□□□□□ -1.75
PRE1YER012W OPT1P40897 799 aa4.12□□□□□ -1.75
PRE1YER012W ATG36P46983 293 aa4.12□□□□□ -1.75
PRE1YER012W YNR029CP53729 429 aaKnown RBP4.12□□□□□ -1.75
PRE1YER012W ERG13P54839 491 aaKnown RBP4.12□□□□□ -1.75
PRE1YER012W TGS1Q12052 315 aa4.12□□□□□ -1.75
PRE1YER012W YLR111WQ12528 110 aa4.12□□□□□ -1.75
PRE1YER012W NUP188P52593 1655 aaKnown RBP4.11□□□□□ -1.75
PRE1YER012W ACO1P19414 778 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
PRE1YER012W BRN1P38170 754 aa4.11□□□□□ -1.75
PRE1YER012W YAP3P38749 330 aa4.11□□□□□ -1.75
PRE1YER012W SQS1P53866 767 aaKnown RBP4.11□□□□□ -1.75
PRE1YER012W USA1Q03714 838 aa4.11□□□□□ -1.75
PRE1YER012W NGL1Q08213 363 aaKnown RBP4.11□□□□□ -1.75
PRE1YER012W APM4Q99186 491 aa4.11□□□□□ -1.75
PRE1YER012W YMR084WA2P2R3 262 aa4.1□□□□□ -1.75
PRE1YER012W YMR085WP0CF18 432 aa4.1□□□□□ -1.75
PRE1YER012W YPK1P12688 680 aaKnown RBP4.1□□□□□ -1.75
PRE1YER012W YJL193WP39542 402 aa4.1□□□□□ -1.75
PRE1YER012W SNO3P43544 222 aa4.1□□□□□ -1.75
PRE1YER012W MAK10Q02197 733 aa4.1□□□□□ -1.75
PRE1YER012W YPL068CQ02749 293 aa4.1□□□□□ -1.75
PRE1YER012W GFD1Q04839 188 aaKnown RBP4.1□□□□□ -1.75
PRE1YER012W BSP1Q06604 576 aa4.1□□□□□ -1.75
PRE1YER012W YAP1P19880 650 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms