RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC5, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC5	YDR059C	NMD2	P38798	1089 aa	Known RBP	4.64	□□□□□ -1.67
UBC5	YDR059C	YIL024C	P40543	189 aa		4.64	□□□□□ -1.67
UBC5	YDR059C	CFD1	P40558	293 aa		4.64	□□□□□ -1.67
UBC5	YDR059C	GPP1	P41277	250 aa	Known RBP	4.64	□□□□□ -1.67
UBC5	YDR059C	YPL071C	Q02864	156 aa		4.64	□□□□□ -1.67
UBC5	YDR059C	ENT2	Q05785	613 aa		4.64	□□□□□ -1.67
UBC5	YDR059C	CYK3	Q07533	885 aa		4.64	□□□□□ -1.67
UBC5	YDR059C	NGL1	Q08213	363 aa	Known RBP	4.64	□□□□□ -1.67
UBC5	YDR059C	YER190C-B	P0CX94	160 aa		4.63	□□□□□ -1.67
UBC5	YDR059C	YEL077W-A	P0CX95	160 aa		4.63	□□□□□ -1.67
UBC5	YDR059C	YGR296C-B	P0CX96	160 aa		4.63	□□□□□ -1.67
UBC5	YDR059C	YPL283W-B	P0CX97	160 aa		4.63	□□□□□ -1.67
UBC5	YDR059C	YPR204C-A	P0CX98	160 aa		4.63	□□□□□ -1.67
UBC5	YDR059C	PCK1	P10963	549 aa		4.63	□□□□□ -1.67
UBC5	YDR059C	LSC1	P53598	329 aa	Known RBP	4.63	□□□□□ -1.67
UBC5	YDR059C	YNR029C	P53729	429 aa	Known RBP	4.63	□□□□□ -1.67
UBC5	YDR059C	MRPL1	Q04599	285 aa		4.63	□□□□□ -1.67
UBC5	YDR059C	MGM1	P32266	881 aa		4.62	□□□□□ -1.67
UBC5	YDR059C	SRP68	P38687	599 aa	Known RBP	4.62	□□□□□ -1.67
UBC5	YDR059C	YMR124W	P39523	943 aa	Known RBP	4.62	□□□□□ -1.67
UBC5	YDR059C	IRC7	P43623	340 aa		4.62	□□□□□ -1.67
UBC5	YDR059C	COP1	P53622	1201 aa	Known RBP	4.62	□□□□□ -1.67
UBC5	YDR059C	YNL092W	P53934	400 aa		4.62	□□□□□ -1.67
UBC5	YDR059C	HER1	Q12276	1246 aa		4.62	□□□□□ -1.67
UBC5	YDR059C	VPS5	Q92331	675 aa		4.62	□□□□□ -1.67
UBC5	YDR059C	CBP3	P21560	335 aa		4.61	□□□□□ -1.67
UBC5	YDR059C	ATP12	P22135	325 aa		4.61	□□□□□ -1.67
UBC5	YDR059C	NUP53	Q03790	475 aa		4.61	□□□□□ -1.67
UBC5	YDR059C	CET1	O13297	549 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC5	YDR059C	CWH43	P25618	953 aa		4.6	□□□□□ -1.67
UBC5	YDR059C	SER1	P33330	395 aa	Known RBP	4.6	□□□□□ -1.67
UBC5	YDR059C	SDH8	P38345	138 aa		4.6	□□□□□ -1.67
UBC5	YDR059C	YNL058C	P53947	316 aa		4.6	□□□□□ -1.67
UBC5	YDR059C	MTD1	Q02046	320 aa	Known RBP	4.6	□□□□□ -1.67
UBC5	YDR059C	RAD33	Q04231	177 aa		4.6	□□□□□ -1.67
UBC5	YDR059C	FAP7	Q12055	197 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC5	YDR059C	PNO1	Q99216	274 aa	Known RBP	4.6	□□□□□ -1.67
UBC5	YDR059C	GDA1	P32621	518 aa		4.59	□□□□□ -1.67
UBC5	YDR059C	IRC5	P43610	853 aa		4.59	□□□□□ -1.67
UBC5	YDR059C	YJR142W	P47173	342 aa		4.59	□□□□□ -1.67
UBC5	YDR059C	NEW1	Q08972	1196 aa	Known RBP	4.59	□□□□□ -1.67
UBC5	YDR059C	YEL076C-A	P0CX16	216 aa		4.58	□□□□□ -1.68
UBC5	YDR059C	YLR464W	P0CX17	216 aa		4.58	□□□□□ -1.68
UBC5	YDR059C	MAK32	P23060	363 aa		4.58	□□□□□ -1.68
UBC5	YDR059C	COQ3	P27680	312 aa		4.58	□□□□□ -1.68
UBC5	YDR059C	YEL076C	P39971	216 aa		4.58	□□□□□ -1.68
UBC5	YDR059C	YGR237C	P50089	785 aa		4.58	□□□□□ -1.68
UBC5	YDR059C	YPR027C	Q12079	277 aa		4.58	□□□□□ -1.68
UBC5	YDR059C	YPT1	P01123	206 aa	Known RBP	4.57	□□□□□ -1.68
UBC5	YDR059C	YCP4	P25349	247 aa	Known RBP	4.57	□□□□□ -1.68
UBC5	YDR059C	FTH1	P38310	465 aa		4.57	□□□□□ -1.68
UBC5	YDR059C	RRP8	P38961	392 aa	Known RBP	4.57	□□□□□ -1.68
UBC5	YDR059C	PEA2	P40091	420 aa		4.57	□□□□□ -1.68
UBC5	YDR059C	RAD26	P40352	1085 aa		4.57	□□□□□ -1.68
UBC5	YDR059C	CIR1	P42940	261 aa		4.57	□□□□□ -1.68
UBC5	YDR059C	MDR1	P53258	950 aa		4.57	□□□□□ -1.68
UBC5	YDR059C	RPL15B	P54780	204 aa	Predicted RBP	4.57	□□□□□ -1.68
UBC5	YDR059C	SKY1	Q03656	742 aa		4.57	□□□□□ -1.68
UBC5	YDR059C	AIM44	Q99299	758 aa		4.57	□□□□□ -1.68
UBC5	YDR059C	LAS21	P40367	830 aa		4.56	□□□□□ -1.68
UBC5	YDR059C	CHO2	P05374	869 aa	Known RBP	4.55	□□□□□ -1.68
UBC5	YDR059C	AIM17	P23180	465 aa	Known RBP	4.55	□□□□□ -1.68
UBC5	YDR059C	DAL3	P32459	195 aa		4.55	□□□□□ -1.68
UBC5	YDR059C	ATO2	P32907	282 aa		4.55	□□□□□ -1.68
UBC5	YDR059C	GPP2	P40106	250 aa	Known RBP	4.55	□□□□□ -1.68
UBC5	YDR059C	DUG1	P43616	481 aa	Known RBP	4.55	□□□□□ -1.68
UBC5	YDR059C	MNT2	P53059	558 aa		4.55	□□□□□ -1.68
UBC5	YDR059C	COG2	P53271	262 aa		4.55	□□□□□ -1.68
UBC5	YDR059C	SNU56	Q03782	492 aa	Known RBP	4.55	□□□□□ -1.68
UBC5	YDR059C	RMP1	Q12530	201 aa		4.55	□□□□□ -1.68
UBC5	YDR059C	YGR161W-C	Q3E744	92 aa		4.55	□□□□□ -1.68
UBC5	YDR059C	ARG1	P22768	420 aa		4.54	□□□□□ -1.68
UBC5	YDR059C	IMD2	P38697	523 aa	Known RBP	4.54	□□□□□ -1.68
UBC5	YDR059C	IMD3	P50095	523 aa	Known RBP	4.54	□□□□□ -1.68
UBC5	YDR059C	COS12	P53053	380 aa		4.54	□□□□□ -1.68
UBC5	YDR059C	SRL1	Q08673	210 aa		4.54	□□□□□ -1.68
UBC5	YDR059C	BUD7	Q08754	746 aa		4.54	□□□□□ -1.68
UBC5	YDR059C	YOR378W	Q08902	515 aa		4.54	□□□□□ -1.68
UBC5	YDR059C	PLC1	P32383	869 aa		4.53	□□□□□ -1.68
UBC5	YDR059C	GCS1	P35197	352 aa		4.53	□□□□□ -1.68
UBC5	YDR059C	MAM1	P40065	302 aa		4.53	□□□□□ -1.68
UBC5	YDR059C	CIN1	P40987	1014 aa		4.53	□□□□□ -1.68
UBC5	YDR059C	Q0010	Q9ZZX9	128 aa		4.53	□□□□□ -1.68
UBC5	YDR059C	ILS1	P09436	1072 aa	Known RBP	4.52	□□□□□ -1.69
UBC5	YDR059C	AMD2	P22580	549 aa		4.52	□□□□□ -1.69
UBC5	YDR059C	RRP43	P25359	394 aa	Predicted RBP	4.52	□□□□□ -1.69
UBC5	YDR059C	KES1	P35844	434 aa	Known RBP	4.52	□□□□□ -1.69
UBC5	YDR059C	MTG2	P38860	518 aa		4.52	□□□□□ -1.69
UBC5	YDR059C	FLO5	P38894	1075 aa		4.52	□□□□□ -1.69
UBC5	YDR059C	NOP2	P40991	618 aa	Known RBP	4.52	□□□□□ -1.69
UBC5	YDR059C	LYS20	P48570	428 aa	Known RBP	4.52	□□□□□ -1.69
UBC5	YDR059C	YML119W	Q03208	357 aa		4.52	□□□□□ -1.69
UBC5	YDR059C	LCB4	Q12246	624 aa		4.52	□□□□□ -1.69
UBC5	YDR059C	FPR3	P38911	411 aa	Known RBP	4.51	□□□□□ -1.69
UBC5	YDR059C	MAF1	P41910	395 aa		4.51	□□□□□ -1.69
UBC5	YDR059C	MDV1	P47025	714 aa		4.51	□□□□□ -1.69
UBC5	YDR059C	VTC3	Q02725	835 aa		4.51	□□□□□ -1.69
UBC5	YDR059C	RAD34	Q06665	692 aa		4.51	□□□□□ -1.69
UBC5	YDR059C	SNA4	Q07549	140 aa		4.51	□□□□□ -1.69
UBC5	YDR059C	GET3	Q12154	354 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms