RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RRP12Q5JTH9 1297 aaKnown RBP19.27■□□□□ 0.68
PHGDH-216ENST00000641375 DDX11Q96FC9 970 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 HPS5Q9UPZ3 1129 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 TACC3Q9Y6A5 838 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 MROH7-TTC4A0A0A0MT08 1334 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 CDC37L1Q7L3B6 337 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 TMTC2Q8N394 836 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 CNKSR1Q969H4 720 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 LY9Q9HBG7 655 aa19.27■□□□□ 0.68
PHGDH-216ENST00000641375 USP17L12C9JPN9 530 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 USP17L21D6R901 530 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 H3BQV1 296 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 CPLX1O14810 134 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
PHGDH-216ENST00000641375 FOXD4L6Q3SYB3 417 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-216ENST00000641375 SBK1Q52WX2 424 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 IFFO2Q5TF58 517 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 FOXD4L3Q6VB84 417 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-216ENST00000641375 NFXL1Q6ZNB6 911 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 NKX2-3Q8TAU0 364 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 CHAMP1Q96JM3 812 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 GZF1Q9H116 711 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-216ENST00000641375 SUGT1Q9Y2Z0 365 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 FGRP09769 529 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 CSPP1Q1MSJ5 1256 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 APOA5Q6Q788 366 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 DEFB132Q7Z7B7 95 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 TMEM87AQ8NBN3 555 aa19.26■□□□□ 0.67
PHGDH-216ENST00000641375 CCDC69A6NI79 296 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 METAP2P50579 478 aaKnown RBP eCLIP19.25■□□□□ 0.671e-6■■□□□ 12.1
PHGDH-216ENST00000641375 DIXDC1Q155Q3 683 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 FAM43AQ8N2R8 423 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 ZBTB43O43298 467 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 MBD3O95983 291 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 GRIK5Q16478 980 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 SYNE3Q6ZMZ3 975 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 SLC16A10Q8TF71 515 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 FAM163AQ96GL9 167 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-216ENST00000641375 UBAC1Q9BSL1 405 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 SLC12A7Q9Y666 1083 aa19.25■□□□□ 0.67
PHGDH-216ENST00000641375 SLX4Q8IY92 1834 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 G3V3G9 751 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 CDKL5O76039 1030 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 PLCG2P16885 1265 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 NCLP19338 710 aaKnown RBP19.24■□□□□ 0.67
PHGDH-216ENST00000641375 USP5P45974 858 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 NT5C2P49902 561 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 GTF2IP78347 998 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 WTAPQ15007 396 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 DCAF8Q5TAQ9 597 aa19.24■□□□□ 0.67
PHGDH-216ENST00000641375 CPLX2Q6PUV4 134 aaKnown RBP19.24■□□□□ 0.67
PHGDH-216ENST00000641375 RTFDC1Q9BY42 306 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-216ENST00000641375 ZSCAN16Q9H4T2 348 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-216ENST00000641375 AMOTL1Q8IY63 956 aa19.23■□□□□ 0.67
PHGDH-216ENST00000641375 STK11IPQ8N1F8 1099 aa19.23■□□□□ 0.67
PHGDH-216ENST00000641375 GPR75-ASB3A0A0A6YYF3 556 aa19.23■□□□□ 0.67
PHGDH-216ENST00000641375 RCAN1P53805 252 aa19.23■□□□□ 0.67
PHGDH-216ENST00000641375 USP48Q86UV5 1035 aa19.23■□□□□ 0.67
PHGDH-216ENST00000641375 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
PHGDH-216ENST00000641375 MKRN1Q9UHC7 482 aaKnown RBP19.23■□□□□ 0.67
PHGDH-216ENST00000641375 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
PHGDH-216ENST00000641375 CYP2D7A0A087X1C5 515 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 PDE4BQ07343 736 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 CCDC125Q86Z20 511 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 SH3RF3Q8TEJ3 882 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-216ENST00000641375 NAV1Q8NEY1 1877 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 CDK5RAP2Q96SN8 1893 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 ORC4O43929 436 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 CHRNA5P30532 468 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 BTDP43251 543 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 KRT85P78386 507 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 DNM1Q05193 864 aaKnown RBP19.22■□□□□ 0.67
PHGDH-216ENST00000641375 GLIPR1L2Q4G1C9 344 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 CC2D2BQ6DHV5 1058 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 PODNQ7Z5L7 613 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 FERMT3Q86UX7 667 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 MICU3Q86XE3 530 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 IQCA1Q86XH1 822 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 RGS22Q8NE09 1264 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 NID2Q14112 1375 aa19.22■□□□□ 0.67
PHGDH-216ENST00000641375 GAKO14976 1311 aa19.21■□□□□ 0.67
PHGDH-216ENST00000641375 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
PHGDH-216ENST00000641375 ZKSCAN3Q9BRR0 538 aa19.21■□□□□ 0.67
PHGDH-216ENST00000641375 SENP2Q9HC62 589 aa19.21■□□□□ 0.67
PHGDH-216ENST00000641375 GOLGA8AA7E2F4 631 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 RANBP6O60518 1105 aaKnown RBP19.2■□□□□ 0.66
PHGDH-216ENST00000641375 GPT2Q8TD30 523 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 GDPD2Q9HCC8 539 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 ORC3Q9UBD5 711 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-216ENST00000641375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
PHGDH-216ENST00000641375 C10orf71Q711Q0 1435 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 DLEC1Q9Y238 1755 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 C12orf60Q5U649 245 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 RAB11FIP4Q86YS3 637 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 ZSCAN10Q96SZ4 725 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-216ENST00000641375 TNKSO95271 1327 aa19.2■□□□□ 0.66
PHGDH-216ENST00000641375 DOK7Q18PE1 504 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 TGFBRAP1Q8WUH2 860 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms