RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 FGAP02671 866 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 NFIAQ12857 509 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 KIF4BQ2VIQ3 1234 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 SBK1Q52WX2 424 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-225ENST00000640900 FAM83AQ86UY5 434 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
SCARB2-225ENST00000640900 IFNL3Q8IZI9 196 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
SCARB2-225ENST00000640900 TAF1DQ9H5J8 278 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-225ENST00000640900 TDRD3Q9H7E2 651 aaKnown RBP10.92□□□□□ -0.66
SCARB2-225ENST00000640900 DDX4Q9NQI0 724 aaKnown RBP10.92□□□□□ -0.66
SCARB2-225ENST00000640900 USP40Q9NVE5 1235 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
SCARB2-225ENST00000640900 CNTNAP1P78357 1384 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 FLT1P17948 1338 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 IQCA1LA6NCM1 817 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 FGRP09769 529 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 EPHX2P34913 555 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 MAP3K10Q02779 954 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 TSGA10IPQ3SY00 556 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 TBC1D10BQ4KMP7 808 aaPredicted RBP10.91□□□□□ -0.66
SCARB2-225ENST00000640900 TEX11Q8IYF3 940 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 PLCD3Q8N3E9 789 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 NOL10Q9BSC4 688 aaKnown RBP10.91□□□□□ -0.66
SCARB2-225ENST00000640900 ANAPC4Q9UJX5 808 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
SCARB2-225ENST00000640900 ASTN2O75129 1339 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-225ENST00000640900 LMOD1P29536 600 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-225ENST00000640900 HSPA4P34932 840 aa10.9□□□□□ -0.66
SCARB2-225ENST00000640900 CTR9Q6PD62 1173 aa10.9□□□□□ -0.66
SCARB2-225ENST00000640900 SH3BP5LQ7L8J4 393 aa10.9□□□□□ -0.66
SCARB2-225ENST00000640900 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
SCARB2-225ENST00000640900 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
SCARB2-225ENST00000640900 OSBPL5Q9H0X9 879 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-225ENST00000640900 RBM8AQ9Y5S9 174 aaKnown RBP10.9□□□□□ -0.66
SCARB2-225ENST00000640900 ROBO3Q96MS0 1386 aa10.9□□□□□ -0.67
SCARB2-225ENST00000640900 LAMA4Q16363 1823 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 VEGFAP15692 232 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-225ENST00000640900 RBM25P49756 843 aaKnown RBP10.89□□□□□ -0.67
SCARB2-225ENST00000640900 RBM5P52756 815 aaKnown RBP eCLIP10.89□□□□□ -0.67
SCARB2-225ENST00000640900 GABPAQ06546 454 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 C12orf60Q5U649 245 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-225ENST00000640900 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 FAM151AQ8WW52 585 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 TEPSINQ96N21 525 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 ANO2Q9NQ90 1003 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 CTNNA3Q9UI47 895 aa10.89□□□□□ -0.67
SCARB2-225ENST00000640900 BAZ2AQ9UIF9 1905 aaKnown RBP10.89□□□□□ -0.67
SCARB2-225ENST00000640900 SIPA1L1O43166 1804 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 CLRN2A0PK11 232 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 USP17L21D6R901 530 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 MYO1BO43795 1136 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 CYP21A2P08686 494 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 CACNB3P54284 484 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
SCARB2-225ENST00000640900 NAV1Q8NEY1 1877 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 TBC1D32Q96NH3 1257 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 NACAP1Q9BZK3 213 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 EHD4Q9H223 541 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 TAF6LQ9Y6J9 622 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 MYH1P12882 1939 aa10.88□□□□□ -0.67
SCARB2-225ENST00000640900 POLR2AP24928 1970 aaKnown RBP10.87□□□□□ -0.67
SCARB2-225ENST00000640900 SMIM22K7EJ46 135 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 SLC27A2O14975 620 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 USP5P45974 858 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 PLCD1P51178 756 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 ANAPC15P60006 121 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 TNFAIP1Q13829 316 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 ANGEL2Q5VTE6 544 aaKnown RBP10.87□□□□□ -0.67
SCARB2-225ENST00000640900 CREB3L3Q68CJ9 461 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 APOBEC3FQ8IUX4 373 aaKnown RBP10.87□□□□□ -0.67
SCARB2-225ENST00000640900 MAPKAPK5Q8IW41 473 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 KIF2CQ99661 725 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 NAPBQ9H115 298 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 DHX36Q9H2U1 1008 aaKnown RBP10.87□□□□□ -0.67
SCARB2-225ENST00000640900 NMRK2Q9NPI5 230 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 GGA3Q9NZ52 723 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 ARPP21Q9UBL0 812 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-225ENST00000640900 PPP2R3BQ9Y5P8 575 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 LAMB1P07942 1786 aa10.87□□□□□ -0.67
SCARB2-225ENST00000640900 DDTLA6NHG4 134 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-225ENST00000640900 TBC1D12O60347 775 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 PCP11498 1178 aaKnown RBP10.86□□□□□ -0.67
SCARB2-225ENST00000640900 EVX2Q03828 476 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 PPARAQ07869 468 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 RASA3Q14644 834 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 DEFB129Q9H1M3 183 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 RRAGCQ9HB90 399 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 MCM9Q9NXL9 1143 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 TMOD2Q9NZR1 351 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 PALD1Q9ULE6 856 aa10.86□□□□□ -0.67
SCARB2-225ENST00000640900 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms