RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 PYCARDQ9ULZ3 195 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 ATAD5Q96QE3 1844 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 KRT2P35908 639 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 FAM173BQ6P4H8 233 aa6.34□□□□□ -1.39
SCN3A-210ENST00000640652 RBM43Q6ZSC3 357 aaKnown RBP6.34□□□□□ -1.39
SCN3A-210ENST00000640652 SEC63Q9UGP8 760 aaKnown RBP6.34□□□□□ -1.39
SCN3A-210ENST00000640652 MYH14Q7Z406 1995 aaKnown RBP6.34□□□□□ -1.39
SCN3A-210ENST00000640652 SASH1O94885 1247 aa6.34□□□□□ -1.4
SCN3A-210ENST00000640652 NOSTRINQ8IVI9 506 aa6.34□□□□□ -1.4
SCN3A-210ENST00000640652 TMX4Q9H1E5 349 aaPredicted RBP6.34□□□□□ -1.4
SCN3A-210ENST00000640652 CTIFO43310 598 aaKnown RBP6.34□□□□□ -1.4
SCN3A-210ENST00000640652 CALML3P27482 149 aa6.34□□□□□ -1.4
SCN3A-210ENST00000640652 LRMPQ12912 555 aa6.34□□□□□ -1.4
SCN3A-210ENST00000640652 SPECC1LQ69YQ0 1117 aa6.34□□□□□ -1.4
SCN3A-210ENST00000640652 KIAA1217Q5T5P2 1943 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 PAPPAQ13219 1627 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC144CPQ8IYA2 1237 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 FERMT2Q96AC1 680 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 RBM33Q96EV2 1170 aaKnown RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 MAST3O60307 1309 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 EFCAB8A8MWE9 144 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 U2AF2P26368 475 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 IFIT1BQ5T764 474 aaKnown RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 RAI14Q9P0K7 980 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 GOLGA6L10A6NI86 522 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 IGKV5-2P06315 115 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 PFKFB1P16118 471 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 TTLL5Q6EMB2 1281 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 C11orf57Q6ZUT1 292 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 GPR161Q8N6U8 529 aaKnown RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 ALS2CR12Q96Q35 445 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 RAB34Q9BZG1 259 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 FAM177BA6PVY3 158 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 AKR1B15C9JRZ8 316 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 M0R2C6 588 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 CKAP4Q07065 602 aaKnown RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC178Q5BJE1 867 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 CRACR2AQ9BSW2 395 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 TSGA10Q9BZW7 698 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 ABCA3Q99758 1704 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 COL18A1P39060 1754 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 SLC39A14Q15043 492 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 MAGEB6Q8N7X4 407 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 PPP1R13BQ96KQ4 1090 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 ORAI2Q96SN7 254 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 OSBPL5Q9H0X9 879 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 NDUFB9Q9Y6M9 179 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 MARCH6O60337 910 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 PPP6R2O75170 966 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 TRIM21P19474 475 aaKnown RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 CHMP4BP1P59074 171 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 RABL6Q3YEC7 729 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 FKBP15Q5T1M5 1219 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 EIF5P55010 431 aaKnown RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 CTSWP56202 376 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 SPA17Q15506 151 aa6.33□□□□□ -1.4
SCN3A-210ENST00000640652 JARID2Q92833 1246 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-210ENST00000640652 NCBP1Q09161 790 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 KIF4BQ2VIQ3 1234 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC102AQ96A19 550 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 TTF2Q9UNY4 1162 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 JCADQ9P266 1359 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 DOT1LQ8TEK3 1739 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 GOLGA4Q13439 2230 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC194A0A1B0GVG4 234 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 FGAP02671 866 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 ITGA6P23229 1130 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 CDR1P51861 262 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 PPP2R3AQ06190 1150 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 HDXQ7Z353 690 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 DHX40Q8IX18 779 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 CACTINQ8WUQ7 758 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 ZNF215Q9UL58 517 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 STAT6P42226 847 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 NAP1L1P55209 391 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 ZBTB38Q8NAP3 1195 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 IQCDQ96DY2 449 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 UTP14AQ9BVJ6 771 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 DEF6Q9H4E7 631 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 MINDY4BA8MYZ0 360 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 PCP11498 1178 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 RCAN1P53805 252 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 PTPN12Q05209 780 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 IQUBQ8NA54 791 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 LINC00301Q8NCQ3 95 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 ABCF2Q9UG63 623 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 STK36Q9NRP7 1315 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 KIAA1551Q9HCM1 1747 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 AMPD3Q01432 767 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 SYT10Q6XYQ8 523 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 KCNF1Q9H3M0 494 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 BICDL2A1A5D9 508 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 POLR2DO15514 142 aaKnown RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 SPTY2D1Q68D10 685 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC51Q96ER9 411 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 N4BP3O15049 544 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 TIMM10P62072 90 aa6.32□□□□□ -1.4
SCN3A-210ENST00000640652 DPCR1Q3MIW9 517 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms