RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 CREBRFQ8IUR6 639 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 MAN1B1Q9UKM7 699 aa23.16■■□□□ 1.3
CACNA1A-243ENST00000637616 TPM1P09493 284 aa23.15■■□□□ 1.3
CACNA1A-243ENST00000637616 TRDNQ13061 729 aa23.15■■□□□ 1.3
CACNA1A-243ENST00000637616 SIPA1L3O60292 1781 aaPredicted RBP23.15■■□□□ 1.3
CACNA1A-243ENST00000637616 SPECC1LQ69YQ0 1117 aa23.15■■□□□ 1.3
CACNA1A-243ENST00000637616 NFXL1Q6ZNB6 911 aa23.15■■□□□ 1.3
CACNA1A-243ENST00000637616 ANGEL1Q9UNK9 670 aaKnown RBP23.15■■□□□ 1.3
CACNA1A-243ENST00000637616 POLR2DO15514 142 aaKnown RBP23.14■■□□□ 1.3
CACNA1A-243ENST00000637616 RANBP6O60518 1105 aaKnown RBP23.14■■□□□ 1.3
CACNA1A-243ENST00000637616 LMAN1P49257 510 aa23.14■■□□□ 1.3
CACNA1A-243ENST00000637616 MCM6Q14566 821 aa23.14■■□□□ 1.3
CACNA1A-243ENST00000637616 MED15Q96RN5 788 aa23.14■■□□□ 1.3
CACNA1A-243ENST00000637616 SEC31BQ9NQW1 1179 aa23.14■■□□□ 1.3
CACNA1A-243ENST00000637616 APPBP2Q92624 585 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 SERTAD1Q9UHV2 236 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 LCMT1Q9UIC8 334 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 ZMYM6O95789 1325 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 LONRF2Q1L5Z9 754 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 WWC2Q6AWC2 1192 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 SLC26A6Q9BXS9 759 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 SUGCTQ9HAC7 445 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 KCNJ14Q9UNX9 436 aa23.14■■□□□ 1.29
CACNA1A-243ENST00000637616 BTBD18B2RXH4 712 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 APOA5Q6Q788 366 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 KRT28Q7Z3Y7 464 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 FCHSD1Q86WN1 690 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 CMTR1Q8N1G2 835 aaKnown RBP23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 CABLES1Q8TDN4 633 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 DDX17Q92841 729 aaKnown RBP23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 FEZ2Q9UHY8 353 aaPredicted RBP23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 TEX33O43247 280 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 STX10O60499 249 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 TXLNBQ8N3L3 684 aa23.13■■□□□ 1.29
CACNA1A-243ENST00000637616 GUCY1A2P33402 732 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 IARSP41252 1262 aaKnown RBP23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 MDM2Q00987 491 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 ZSCAN26Q16670 478 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 CCDC57Q2TAC2 916 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 USP49Q70CQ1 688 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 ADAM21Q9UKJ8 722 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 TRIM29Q14134 588 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 GOLGA1Q92805 767 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 TEX13AQ9BXU3 409 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 COBLO75128 1261 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 STX17P56962 302 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 POSTNQ15063 836 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 KLHL10Q6JEL2 608 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
CACNA1A-243ENST00000637616 TRIM66O15016 1216 aa23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 CUTAO60888 179 aa23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 CASP1P29466 404 aa23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 SLC9C2Q5TAH2 1124 aa23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 KRI1Q8N9T8 703 aaKnown RBP23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 RABGGTAQ92696 567 aa23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 UBN2Q6ZU65 1347 aa23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 MEGF6O75095 1541 aa23.11■■□□□ 1.29
CACNA1A-243ENST00000637616 SH2B2O14492 632 aaPredicted RBP23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 DCAF5Q96JK2 942 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 ZBTB43O43298 467 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 TXLNAP40222 546 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 PLCD3Q8N3E9 789 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 PDE11AQ9HCR9 933 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 CPDO75976 1380 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 GOLGA8AA7E2F4 631 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 ATP8B1O43520 1251 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 N4BP1O75113 896 aaKnown RBP23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 IDH1O75874 414 aaKnown RBP23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 TAF7LQ5H9L4 462 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 RAD9BQ6WBX8 426 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 SYNE4Q8N205 404 aa23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 FAM217BQ9NTX9 383 aaPredicted RBP23.1■■□□□ 1.29
CACNA1A-243ENST00000637616 ABL1P00519 1130 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 ZNF18P17022 549 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 TOB1P50616 345 aaPredicted RBP23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 GPS2Q13227 327 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 FAM89AQ96GI7 184 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 RAI14Q9P0K7 980 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 ZFYP08048 801 aaPredicted RBP23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 CHMP4BP1P59074 171 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 NTRK3Q16288 839 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 C10orf67Q8IYJ2 551 aa23.09■■□□□ 1.29
CACNA1A-243ENST00000637616 MCAMP43121 646 aa23.08■■□□□ 1.29
CACNA1A-243ENST00000637616 PNKPQ96T60 521 aa23.08■■□□□ 1.29
CACNA1A-243ENST00000637616 VPS18Q9P253 973 aa23.08■■□□□ 1.29
CACNA1A-243ENST00000637616 CPLX2Q6PUV4 134 aaKnown RBP23.08■■□□□ 1.29
CACNA1A-243ENST00000637616 ZKSCAN3Q9BRR0 538 aa23.08■■□□□ 1.29
CACNA1A-243ENST00000637616 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.08■■□□□ 1.29
CACNA1A-243ENST00000637616 RGPD5Q99666 1765 aa23.08■■□□□ 1.28
CACNA1A-243ENST00000637616 FAM237AA0A1B0GTK4 181 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 CDKL5O76039 1030 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 RHOXF2BP0C7M4 288 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 RBL2Q08999 1139 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 NR5A1Q13285 461 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 RHOXF2Q9BQY4 288 aa23.07■■□□□ 1.28
CACNA1A-243ENST00000637616 GOLGA6L9A6NEM1 432 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms