RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 STAG1Q8WVM7 1258 aa17.42■□□□□ 0.38
CLN5-209ENST00000636405 RIOK1Q9BRS2 568 aaKnown RBP17.42■□□□□ 0.38
CLN5-209ENST00000636405 SPTLC2O15270 562 aa17.42■□□□□ 0.38
CLN5-209ENST00000636405 ZNF500O60304 480 aaPredicted RBP17.42■□□□□ 0.38
CLN5-209ENST00000636405 KINO60870 393 aaKnown RBP17.42■□□□□ 0.38
CLN5-209ENST00000636405 GNAT2P19087 354 aa17.42■□□□□ 0.38
CLN5-209ENST00000636405 FAM160A1Q05DH4 1040 aa17.42■□□□□ 0.38
CLN5-209ENST00000636405 KRT23Q9C075 422 aa17.42■□□□□ 0.38
CLN5-209ENST00000636405 GNL2Q13823 731 aaKnown RBP17.41■□□□□ 0.38
CLN5-209ENST00000636405 WTAPQ15007 396 aa17.41■□□□□ 0.38
CLN5-209ENST00000636405 GPR101Q96P66 508 aaPredicted RBP17.41■□□□□ 0.38
CLN5-209ENST00000636405 KCNJ14Q9UNX9 436 aa17.41■□□□□ 0.38
CLN5-209ENST00000636405 WDHD1O75717 1129 aaPredicted RBP17.41■□□□□ 0.38
CLN5-209ENST00000636405 PRDX5P30044 214 aa17.41■□□□□ 0.38
CLN5-209ENST00000636405 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
CLN5-209ENST00000636405 TPTE2Q6XPS3 522 aa17.41■□□□□ 0.38
CLN5-209ENST00000636405 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
CLN5-209ENST00000636405 CNNM2Q9H8M5 875 aa17.41■□□□□ 0.38
CLN5-209ENST00000636405 LIFRP42702 1097 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 ATL3Q6DD88 541 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 ADALQ6DHV7 355 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
CLN5-209ENST00000636405 FMR1NBQ8N0W7 255 aaPredicted RBP17.4■□□□□ 0.38
CLN5-209ENST00000636405 AATFQ9NY61 560 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLN5-209ENST00000636405 DOCK2Q92608 1830 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 C4AP0C0L4 1744 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 hCG_1642624A0A1W2PR95 340 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 OFD1O75665 1012 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 TM4SF1P30408 202 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 RC3H1Q5TC82 1133 aaKnown RBP17.4■□□□□ 0.38
CLN5-209ENST00000636405 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 SDF4Q9BRK5 362 aa17.4■□□□□ 0.38
CLN5-209ENST00000636405 BCORQ6W2J9 1755 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 CDKL5O76039 1030 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 MECOMQ03112 1051 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.37
CLN5-209ENST00000636405 BRAPQ7Z569 592 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 FBXO33Q7Z6M2 555 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 NYXQ9GZU5 481 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 R3HCC1Q9Y3T6 440 aaKnown RBP17.39■□□□□ 0.37
CLN5-209ENST00000636405 HIBADHP31937 336 aaKnown RBP17.39■□□□□ 0.37
CLN5-209ENST00000636405 RFC4P35249 363 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 NRBP1Q9UHY1 535 aa17.39■□□□□ 0.37
CLN5-209ENST00000636405 CICQ96RK0 1608 aaPredicted RBP17.38■□□□□ 0.37
CLN5-209ENST00000636405 MYH15Q9Y2K3 1946 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 RTN1Q16799 776 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 MEX3CQ5U5Q3 659 aaKnown RBP17.38■□□□□ 0.37
CLN5-209ENST00000636405 LRRC4BQ9NT99 713 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 ERICH2A1L162 156 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 BTBD18B2RXH4 712 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 USP17L12C9JPN9 530 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 USP17L21D6R901 530 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 ISM2Q6H9L7 571 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 NSUN4Q96CB9 384 aaKnown RBP17.38■□□□□ 0.37
CLN5-209ENST00000636405 CLIC6Q96NY7 704 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 TRIM5Q9C035 493 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
CLN5-209ENST00000636405 MROH7-TTC4A0A0A0MT08 1334 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 TNKSO95271 1327 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 BIN1O00499 593 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 CYP2D6P10635 497 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
CLN5-209ENST00000636405 KCNG4Q8TDN1 519 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 LAMB2P55268 1798 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 NMT2O60551 498 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 YEATS4O95619 227 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 TRIM29Q14134 588 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 NFIXQ14938 502 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 SART3Q15020 963 aaKnown RBP17.37■□□□□ 0.37
CLN5-209ENST00000636405 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 ZNF654Q8IZM8 581 aa17.37■□□□□ 0.37
CLN5-209ENST00000636405 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLN5-209ENST00000636405 FMNL1O95466 1100 aaPredicted RBP17.36■□□□□ 0.37
CLN5-209ENST00000636405 ATP2B1P20020 1258 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 IQCB1Q15051 598 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 SPECC1Q5M775 1068 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 DRC7Q8IY82 874 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 GJD4Q96KN9 370 aaPredicted RBP17.36■□□□□ 0.37
CLN5-209ENST00000636405 PTGS1P23219 599 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 ANKIB1Q9P2G1 1089 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 PYCARDQ9ULZ3 195 aa17.36■□□□□ 0.37
CLN5-209ENST00000636405 BTAF1O14981 1849 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 ZNF202O95125 648 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 PFKFB1P16118 471 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 IFNAR1P17181 557 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 NR5A1Q13285 461 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 SLC39A14Q15043 492 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 FAM47AQ5JRC9 791 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 NBPF11Q86T75 865 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 TDRD7Q8NHU6 1098 aaKnown RBP17.35■□□□□ 0.37
CLN5-209ENST00000636405 RNF41Q9H4P4 317 aaPredicted RBP17.35■□□□□ 0.37
CLN5-209ENST00000636405 A0A1W2PQ27 194 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 A0A1W2PQ64 194 aa17.35■□□□□ 0.37
CLN5-209ENST00000636405 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms