RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 MMP20O60882 483 aa11.15□□□□□ -0.62
SMARCA2-245ENST00000635688 C1QTNF8P60827 252 aa11.15□□□□□ -0.62
SMARCA2-245ENST00000635688 SAP130Q9H0E3 1048 aa11.15□□□□□ -0.62
SMARCA2-245ENST00000635688 CRYBG1Q9Y4K1 1723 aa11.15□□□□□ -0.63
SMARCA2-245ENST00000635688 EVA1CP58658 441 aa11.14□□□□□ -0.63
SMARCA2-245ENST00000635688 ZC3H6P61129 1189 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-245ENST00000635688 ETFBKMTQ8IXQ9 262 aa11.14□□□□□ -0.63
SMARCA2-245ENST00000635688 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-245ENST00000635688 PLD4Q96BZ4 506 aa11.14□□□□□ -0.63
SMARCA2-245ENST00000635688 NSUN5Q96P11 429 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-245ENST00000635688 PRR36Q9H6K5 1346 aa11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 UTRNP46939 3433 aa11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 ALX3O95076 343 aa11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 SIK1P57059 783 aa11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 HIRIP3Q9BW71 556 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 CHD4Q14839 1912 aa11.13□□□□□ -0.63
SMARCA2-245ENST00000635688 SSH2Q76I76 1423 aa11.12□□□□□ -0.63
SMARCA2-245ENST00000635688 RFX1P22670 979 aa11.12□□□□□ -0.63
SMARCA2-245ENST00000635688 TRIP4Q15650 581 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-245ENST00000635688 GDF6Q6KF10 455 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-245ENST00000635688 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
SMARCA2-245ENST00000635688 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
SMARCA2-245ENST00000635688 PLSCR1O15162 318 aa11.11□□□□□ -0.63
SMARCA2-245ENST00000635688 OCLNQ16625 522 aa11.11□□□□□ -0.63
SMARCA2-245ENST00000635688 CAPN12Q6ZSI9 719 aa11.11□□□□□ -0.63
SMARCA2-245ENST00000635688 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-245ENST00000635688 ZMIZ1Q9ULJ6 1067 aa11.11□□□□□ -0.63
SMARCA2-245ENST00000635688 EIF3AQ14152 1382 aaKnown RBP11.11□□□□□ -0.63
SMARCA2-245ENST00000635688 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
SMARCA2-245ENST00000635688 DLC1Q96QB1 1528 aa11.1□□□□□ -0.63
SMARCA2-245ENST00000635688 PRMT3O60678 531 aa11.1□□□□□ -0.63
SMARCA2-245ENST00000635688 ZBTB7AO95365 584 aa11.1□□□□□ -0.63
SMARCA2-245ENST00000635688 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
SMARCA2-245ENST00000635688 CASZ1Q86V15 1759 aa11.1□□□□□ -0.63
SMARCA2-245ENST00000635688 PSAPP07602 524 aa11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 NUTM2GQ5VZR2 741 aa11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 PRR23CQ6ZRP0 262 aa11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 DZIP1LQ8IYY4 767 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 IL22RA1Q8N6P7 574 aa11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 SYT17Q9BSW7 474 aa11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 TRAK1Q9UPV9 953 aa11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
SMARCA2-245ENST00000635688 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.64
SMARCA2-245ENST00000635688 ARID4AP29374 1257 aaPredicted RBP11.08□□□□□ -0.64
SMARCA2-245ENST00000635688 AKTIPQ9H8T0 292 aa11.08□□□□□ -0.64
SMARCA2-245ENST00000635688 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMARCA2-245ENST00000635688 TRIM33Q9UPN9 1127 aa11.08□□□□□ -0.64
SMARCA2-245ENST00000635688 PHRF1Q9P1Y6 1649 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-245ENST00000635688 MYOM1P52179 1685 aa11.08□□□□□ -0.64
SMARCA2-245ENST00000635688 SETDB1Q15047 1291 aa11.07□□□□□ -0.64
SMARCA2-245ENST00000635688 MPHOSPH9Q99550 1183 aa11.07□□□□□ -0.64
SMARCA2-245ENST00000635688 RGPD3A6NKT7 1758 aaPredicted RBP11.07□□□□□ -0.64
SMARCA2-245ENST00000635688 RGPD4Q7Z3J3 1758 aa11.07□□□□□ -0.64
SMARCA2-245ENST00000635688 SBF2Q86WG5 1849 aa11.07□□□□□ -0.64
SMARCA2-245ENST00000635688 F8W735 103 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 TNFRSF10BO14763 440 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 SOX18P35713 384 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 PTF1AQ7RTS3 328 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 STK32AQ8WU08 396 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 RNF112Q9ULX5 631 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 OVOS2A0A0G2JMS6 1433 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 OVOS2A0A0J9YW53 1432 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 OVOS2Q6IE36 1432 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 PARP4Q9UKK3 1724 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 ATP7BP35670 1465 aa11.06□□□□□ -0.64
SMARCA2-245ENST00000635688 GHRHP01286 108 aa11.05□□□□□ -0.64
SMARCA2-245ENST00000635688 AGGF1Q8N302 714 aaeCLIP11.05□□□□□ -0.64
SMARCA2-245ENST00000635688 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-245ENST00000635688 CPDO75976 1380 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 SWI5Q1ZZU3 235 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 C16orf46Q6P387 395 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 ADAMTSL4Q6UY14 1074 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 TMEM130Q8N3G9 435 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 MKNK1Q9BUB5 465 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
SMARCA2-245ENST00000635688 ADGRB1O14514 1584 aa11.03□□□□□ -0.64
SMARCA2-245ENST00000635688 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
SMARCA2-245ENST00000635688 MTFR1LQ9H019 292 aa11.03□□□□□ -0.64
SMARCA2-245ENST00000635688 STK32BQ9NY57 414 aa11.03□□□□□ -0.64
SMARCA2-245ENST00000635688 GCP02774 474 aa11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 BRD2P25440 801 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 DDB1Q16531 1140 aa11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 GALNT11Q8NCW6 608 aa11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 KRTAP4-12Q9BQ66 201 aa11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 USP19O94966 1318 aa11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 ACEP12821 1306 aa11.02□□□□□ -0.65
SMARCA2-245ENST00000635688 CRB1P82279 1406 aa11.01□□□□□ -0.65
SMARCA2-245ENST00000635688 ITSN1Q15811 1721 aa11.01□□□□□ -0.65
SMARCA2-245ENST00000635688 COL5A2P05997 1499 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-245ENST00000635688 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-245ENST00000635688 ATP11AP98196 1134 aa11.01□□□□□ -0.65
SMARCA2-245ENST00000635688 NAA30Q147X3 362 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-245ENST00000635688 TXNRD1Q16881 649 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms