RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
PMS1-221ENST00000624204 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.35
PMS1-221ENST00000624204 PSEN1P49768 467 aa17.27■□□□□ 0.35
PMS1-221ENST00000624204 SUGP1Q8IWZ8 645 aaKnown RBP17.27■□□□□ 0.35
PMS1-221ENST00000624204 KBTBD3Q8NAB2 608 aa17.27■□□□□ 0.35
PMS1-221ENST00000624204 KAT2BQ92831 832 aa17.27■□□□□ 0.35
PMS1-221ENST00000624204 NAPGQ99747 312 aaPredicted RBP17.27■□□□□ 0.35
PMS1-221ENST00000624204 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.35
PMS1-221ENST00000624204 SPATA31D1Q6ZQQ2 1576 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 ITSN1Q15811 1721 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 DDX58O95786 925 aaKnown RBP17.26■□□□□ 0.35
PMS1-221ENST00000624204 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 FKBP4Q02790 459 aaKnown RBP eCLIP17.26■□□□□ 0.35
PMS1-221ENST00000624204 CCDC148Q8NFR7 591 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 ABCC6O95255 1503 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 EXOC5O00471 708 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 EBAG9O00559 213 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 HOXB7P09629 217 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 VPS37DQ86XT2 251 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 AGXT2Q9BYV1 514 aa17.26■□□□□ 0.35
PMS1-221ENST00000624204 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
PMS1-221ENST00000624204 BANK1Q8NDB2 785 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 NUTM2AQ8IVF1 878 aaPredicted RBP17.25■□□□□ 0.35
PMS1-221ENST00000624204 CRACR2AQ9BSW2 395 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 CENPHQ9H3R5 247 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 ENC1O14682 589 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 ECM2O94769 699 aaPredicted RBP17.25■□□□□ 0.35
PMS1-221ENST00000624204 NEXNQ0ZGT2 675 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 HAUS7Q99871 368 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 ALG1Q9BT22 464 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 MAN1B1Q9UKM7 699 aa17.25■□□□□ 0.35
PMS1-221ENST00000624204 PRC1O43663 620 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
PMS1-221ENST00000624204 EHD4Q9H223 541 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 FAM169AQ9Y6X4 670 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 MYO1BO43795 1136 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 SYF2O95926 243 aaKnown RBP17.24■□□□□ 0.35
PMS1-221ENST00000624204 TIMM10P62072 90 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 PHKBQ93100 1093 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 FAM107BQ9H098 131 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 HPSEQ9Y251 543 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 H0YHG0 523 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 CCDC172P0C7W6 258 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 CASP1P29466 404 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 MMP14P50281 582 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 STAMQ92783 540 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 TFR2Q9UP52 801 aa17.24■□□□□ 0.35
PMS1-221ENST00000624204 HNRNPH1P31943 449 aaKnown RBP17.23■□□□□ 0.35
PMS1-221ENST00000624204 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 STIM1Q13586 685 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 A2ML1A8K2U0 1454 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 UBE2Q2LH0YL09 131 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 CPP00450 1065 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 CASP14P31944 242 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 PDE6BP35913 854 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 ATP6V1AP38606 617 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 SF3A3Q12874 501 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■□ 23.8
PMS1-221ENST00000624204 WHAMMP3Q1A5X7 153 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 BCAS4Q8TDM0 211 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 CEP89Q96ST8 783 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 MYD88Q99836 296 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 PAG1Q9NWQ8 432 aa17.23■□□□□ 0.35
PMS1-221ENST00000624204 IGKV5-2P06315 115 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 GGCXP38435 758 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 RALYLQ86SE5 291 aaKnown RBP17.22■□□□□ 0.35
PMS1-221ENST00000624204 FAM76AQ8TAV0 307 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 LRRC59Q96AG4 307 aaKnown RBP17.22■□□□□ 0.35
PMS1-221ENST00000624204 KAT14Q9H8E8 782 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 MYO6Q9UM54 1294 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 CEP83Q9Y592 693 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 NCAPD2Q15021 1401 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 POLR2DO15514 142 aaKnown RBP17.22■□□□□ 0.35
PMS1-221ENST00000624204 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
PMS1-221ENST00000624204 POSTNQ15063 836 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 TTC39AQ5SRH9 613 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 MSL3Q8N5Y2 521 aaKnown RBP17.22■□□□□ 0.35
PMS1-221ENST00000624204 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
PMS1-221ENST00000624204 PANX2Q96RD6 677 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 GUCA1BQ9UMX6 200 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 A1BGP04217 495 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 SWT1Q5T5J6 900 aaKnown RBP17.22■□□□□ 0.35
PMS1-221ENST00000624204 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 DACH1Q9UI36 760 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 MYH15Q9Y2K3 1946 aa17.22■□□□□ 0.35
PMS1-221ENST00000624204 ZNF18P17022 549 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 CCT6AP40227 531 aaKnown RBP17.21■□□□□ 0.35
PMS1-221ENST00000624204 AFMP43652 599 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 TUBB4BP68371 445 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 NR1I3Q14994 352 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 KRT40Q6A162 431 aa17.21■□□□□ 0.35
PMS1-221ENST00000624204 EEF2KMTQ96G04 330 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms