RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 TRAF5O00463 557 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 SYCE1Q8N0S2 351 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 FAM212AQ96EL1 285 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 ZMAT2Q96NC0 199 aaKnown RBP16.07■□□□□ 0.16
CDH23-214ENST00000622827 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 RAD50Q92878 1312 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 TBC1D8O95759 1140 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 FANCCQ00597 558 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 LARSQ9P2J5 1176 aaKnown RBP16.07■□□□□ 0.16
CDH23-214ENST00000622827 IGF1RP08069 1367 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 AKNAD1Q5T1N1 836 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 RRP36Q96EU6 259 aaKnown RBP16.07■□□□□ 0.16
CDH23-214ENST00000622827 RSPH3Q86UC2 560 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 STX10O60499 249 aa16.07■□□□□ 0.16
CDH23-214ENST00000622827 DMTNQ08495 405 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 ANKRD20A3Q5VUR7 823 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 USHBP1Q8N6Y0 703 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 NMIQ13287 307 aaPredicted RBP16.06■□□□□ 0.16
CDH23-214ENST00000622827 WDR44Q5JSH3 913 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 DDX41Q9UJV9 622 aaKnown RBP16.06■□□□□ 0.16
CDH23-214ENST00000622827 RHPN1Q8TCX5 695 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 ATP2A3Q93084 1043 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 KLHL14Q9P2G3 628 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 ARHGAP6O43182 974 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
CDH23-214ENST00000622827 RNF40O75150 1001 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 DNAJC8O75937 253 aaPredicted RBP16.06■□□□□ 0.16
CDH23-214ENST00000622827 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 CROCCQ5TZA2 2017 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 KRT15P19012 456 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 TNNI2P48788 182 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 PPP1R9AQ9ULJ8 1098 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 GUCY2FP51841 1108 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 CUL4BQ13620 913 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 PTPDC1A2A3K4 754 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 PLIN2Q99541 437 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
CDH23-214ENST00000622827 GNGT1P63211 74 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 RAB17Q9H0T7 212 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
CDH23-214ENST00000622827 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDH23-214ENST00000622827 LRRD1A4D1F6 860 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 LDHCP07864 332 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 BAG2O95816 211 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 KLHL7Q8IXQ5 586 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 GDAP1L1Q96MZ0 367 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 CAPS2Q9BXY5 557 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 TMTC1Q8IUR5 882 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 GABPB2Q8TAK5 448 aaPredicted RBP16.05■□□□□ 0.16
CDH23-214ENST00000622827 STX2P32856 288 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 CA8P35219 290 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 TBC1D8BQ0IIM8 1120 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 APOBRQ0VD83 1088 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 GPTP24298 496 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 PSMB7Q99436 277 aa16.05■□□□□ 0.16
CDH23-214ENST00000622827 GNA11P29992 359 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 KRT9P35527 623 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 CASC4Q6P4E1 433 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 NUDT16Q96DE0 195 aaKnown RBP16.04■□□□□ 0.16
CDH23-214ENST00000622827 PDE4DIPQ5VU43 2346 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 CBX8Q9HC52 389 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 TTC41PQ6P2S7 1318 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 CLSTN2Q9H4D0 955 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
CDH23-214ENST00000622827 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 PEX26Q7Z412 305 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 GOLGA8KD6RF30 607 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 LGSNQ5TDP6 509 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 FLOT1O75955 427 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 SPECC1L-ADORA2AF8WAN1 911 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 TROVE2P10155 538 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDH23-214ENST00000622827 ATP1A2P50993 1020 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
CDH23-214ENST00000622827 CCDC105Q8IYK2 499 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 MRPL46Q9H2W6 279 aaKnown RBP16.04■□□□□ 0.16
CDH23-214ENST00000622827 VEZTQ9HBM0 779 aa16.04■□□□□ 0.16
CDH23-214ENST00000622827 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
CDH23-214ENST00000622827 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
CDH23-214ENST00000622827 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
CDH23-214ENST00000622827 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 TRAF1Q13077 416 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 DBN1Q16643 649 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 FAM71BQ8TC56 605 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 ZKSCAN3Q9BRR0 538 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 CHST3Q7LGC8 479 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 NUP58Q9BVL2 599 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 MYH7P12883 1935 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 CEP104O60308 925 aa16.03■□□□□ 0.16
CDH23-214ENST00000622827 TNFAIP3P21580 790 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms