RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ZNF532Q9HCE3 1301 aa18.11■□□□□ 0.49
NPHP4-211ENST00000622020 CASQ1P31415 396 aa18.1■□□□□ 0.49
NPHP4-211ENST00000622020 NR5A1Q13285 461 aa18.1■□□□□ 0.49
NPHP4-211ENST00000622020 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.1■□□□□ 0.49
NPHP4-211ENST00000622020 ARGLU1Q9NWB6 273 aaPredicted RBP18.1■□□□□ 0.49
NPHP4-211ENST00000622020 ABCC6O95255 1503 aa18.1■□□□□ 0.49
NPHP4-211ENST00000622020 SIPA1L3O60292 1781 aaPredicted RBP18.1■□□□□ 0.49
NPHP4-211ENST00000622020 hCG_1642624A0A1W2PR95 340 aa18.1■□□□□ 0.49
NPHP4-211ENST00000622020 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
NPHP4-211ENST00000622020 GREM2Q9H772 168 aa18.1■□□□□ 0.49
NPHP4-211ENST00000622020 SH2B2O14492 632 aaPredicted RBP18.09■□□□□ 0.49
NPHP4-211ENST00000622020 TADA3O75528 432 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 SASH3O75995 380 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 RESP18Q5W5W9 173 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 UBN2Q6ZU65 1347 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 CIAO1O76071 339 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 TFRCP02786 760 aaKnown RBP18.09■□□□□ 0.49
NPHP4-211ENST00000622020 ST5P78524 1137 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 NUP133Q8WUM0 1156 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 AFMP43652 599 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 PHKA1P46020 1223 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 ZFP91Q96JP5 570 aaPredicted RBP18.09■□□□□ 0.49
NPHP4-211ENST00000622020 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.09■□□□□ 0.49
NPHP4-211ENST00000622020 SEC31BQ9NQW1 1179 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 ZSWIM5Q9P217 1185 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 SLC12A7Q9Y666 1083 aa18.09■□□□□ 0.49
NPHP4-211ENST00000622020 ITGA6P23229 1130 aa18.08■□□□□ 0.49
NPHP4-211ENST00000622020 TMEM139Q8IV31 216 aa18.08■□□□□ 0.49
NPHP4-211ENST00000622020 AIDAQ96BJ3 306 aa18.08■□□□□ 0.49
NPHP4-211ENST00000622020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.08■□□□□ 0.49
NPHP4-211ENST00000622020 MAN1B1Q9UKM7 699 aa18.08■□□□□ 0.49
NPHP4-211ENST00000622020 PHLPP2Q6ZVD8 1323 aa18.08■□□□□ 0.49
NPHP4-211ENST00000622020 CCDC66A2RUB6 948 aa18.08■□□□□ 0.48
NPHP4-211ENST00000622020 ZSCAN12O43309 604 aa18.08■□□□□ 0.48
NPHP4-211ENST00000622020 STAMQ92783 540 aa18.08■□□□□ 0.48
NPHP4-211ENST00000622020 DHX58Q96C10 678 aa18.08■□□□□ 0.48
NPHP4-211ENST00000622020 FAM217BQ9NTX9 383 aaPredicted RBP18.08■□□□□ 0.48
NPHP4-211ENST00000622020 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.48
NPHP4-211ENST00000622020 PCDHB6Q9Y5E3 794 aa18.08■□□□□ 0.48
NPHP4-211ENST00000622020 PPP6R2O75170 966 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 ADD2P35612 726 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 DIS3L2Q8IYB7 885 aaKnown RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 SMYD4Q8IYR2 804 aaPredicted RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 FBXL16Q8N461 479 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 CCDC12Q8WUD4 166 aaPredicted RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 C19orf44Q9H6X5 657 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 STRN4Q9NRL3 753 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 SOWAHDA6NJG2 315 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 ARHGAP6O43182 974 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 PRKAB2O43741 272 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 CDKL5O76039 1030 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 PPP2R3AQ06190 1150 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 KRI1Q8N9T8 703 aaKnown RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 ZCRB1Q8TBF4 217 aaKnown RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 TIGD1Q96MW7 591 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 TEX33O43247 280 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 TOB1P50616 345 aaPredicted RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 HNRNPH2P55795 449 aaKnown RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 SSRP1Q08945 709 aaKnown RBP18.07■□□□□ 0.48
NPHP4-211ENST00000622020 TCIRG1Q13488 830 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 POSTNQ15063 836 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 NTRK3Q16288 839 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 TC2NQ8N9U0 490 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 IGDCC4Q8TDY8 1250 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 ARMT1Q9H993 441 aa18.07■□□□□ 0.48
NPHP4-211ENST00000622020 CCP110O43303 1012 aa18.06■□□□□ 0.48
NPHP4-211ENST00000622020 ZRANB2O95218 330 aaKnown RBP eCLIP18.06■□□□□ 0.48
NPHP4-211ENST00000622020 ATF3P18847 181 aa18.06■□□□□ 0.48
NPHP4-211ENST00000622020 HLFQ16534 295 aa18.06■□□□□ 0.48
NPHP4-211ENST00000622020 OXER1Q8TDS5 423 aa18.06■□□□□ 0.48
NPHP4-211ENST00000622020 SLIT3O75094 1523 aa18.06■□□□□ 0.48
NPHP4-211ENST00000622020 KAT6BQ8WYB5 2073 aa18.06■□□□□ 0.48
NPHP4-211ENST00000622020 MRPL44Q9H9J2 332 aaKnown RBP18.06■□□□□ 0.48
NPHP4-211ENST00000622020 LY9Q9HBG7 655 aa18.06■□□□□ 0.48
NPHP4-211ENST00000622020 NWD2Q9ULI1 1742 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 CPDO75976 1380 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 FAM205CA6NFA0 338 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 CUTAO60888 179 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 OAS2P29728 719 aaKnown RBP18.05■□□□□ 0.48
NPHP4-211ENST00000622020 NOSTRINQ8IVI9 506 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 MED15Q96RN5 788 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 PARD6BQ9BYG5 372 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 TACC3Q9Y6A5 838 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 EFCAB8A8MWE9 144 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 PDE6AP16499 860 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 SPECC1LQ69YQ0 1117 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 SMARCE1Q969G3 411 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 NAPBQ9H115 298 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 CABP5Q9NP86 173 aa18.05■□□□□ 0.48
NPHP4-211ENST00000622020 SMIM22K7EJ46 135 aa18.04■□□□□ 0.48
NPHP4-211ENST00000622020 MAGEB6Q8N7X4 407 aa18.04■□□□□ 0.48
NPHP4-211ENST00000622020 IQSEC3Q9UPP2 1182 aaPredicted RBP18.04■□□□□ 0.48
NPHP4-211ENST00000622020 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
NPHP4-211ENST00000622020 MBD4O95243 580 aa18.04■□□□□ 0.48
NPHP4-211ENST00000622020 KCNJ6P48051 423 aa18.04■□□□□ 0.48
NPHP4-211ENST00000622020 MIGA1Q8NAN2 632 aa18.04■□□□□ 0.48
NPHP4-211ENST00000622020 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms