RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 NOM1Q5C9Z4 860 aaKnown RBP35.5■■■■□ 3.27
SEMA3B-215ENST00000621029 AACSQ86V21 672 aa35.5■■■■□ 3.27
SEMA3B-215ENST00000621029 MS4A4AQ96JQ5 239 aa35.5■■■■□ 3.27
SEMA3B-215ENST00000621029 PTPN18Q99952 460 aa35.5■■■■□ 3.27
SEMA3B-215ENST00000621029 AK9Q5TCS8 1911 aa35.49■■■■□ 3.27
SEMA3B-215ENST00000621029 ZAP70P43403 619 aa35.49■■■■□ 3.27
SEMA3B-215ENST00000621029 ZNF512BQ96KM6 892 aaPredicted RBP35.49■■■■□ 3.27
SEMA3B-215ENST00000621029 NAA16Q6N069 864 aaPredicted RBP35.48■■■■□ 3.27
SEMA3B-215ENST00000621029 BRI3BPQ8WY22 251 aa35.48■■■■□ 3.27
SEMA3B-215ENST00000621029 IL1RAPL2Q9NP60 686 aa35.48■■■■□ 3.27
SEMA3B-215ENST00000621029 DDX4Q9NQI0 724 aaKnown RBP35.48■■■■□ 3.27
SEMA3B-215ENST00000621029 CYP2E1P05181 493 aaPredicted RBP35.47■■■■□ 3.27
SEMA3B-215ENST00000621029 RHBDL3P58872 404 aa35.47■■■■□ 3.27
SEMA3B-215ENST00000621029 C20orf194Q5TEA3 1177 aa35.47■■■■□ 3.27
SEMA3B-215ENST00000621029 CRHR2Q13324 411 aa35.46■■■■□ 3.27
SEMA3B-215ENST00000621029 SNAPC2Q13487 334 aa35.46■■■■□ 3.27
SEMA3B-215ENST00000621029 PDE3AQ14432 1141 aa35.46■■■■□ 3.27
SEMA3B-215ENST00000621029 ZNF112Q9UJU3 913 aa35.46■■■■□ 3.27
SEMA3B-215ENST00000621029 IRF6O14896 467 aa35.45■■■■□ 3.27
SEMA3B-215ENST00000621029 CETPP11597 493 aa35.45■■■■□ 3.27
SEMA3B-215ENST00000621029 PPIL2Q13356 520 aa35.45■■■■□ 3.27
SEMA3B-215ENST00000621029 SH3BP5LQ7L8J4 393 aa35.45■■■■□ 3.27
SEMA3B-215ENST00000621029 RHPN1Q8TCX5 695 aa35.45■■■■□ 3.27
SEMA3B-215ENST00000621029 RFX7Q2KHR2 1363 aa35.45■■■■□ 3.27
SEMA3B-215ENST00000621029 DDTLA6NHG4 134 aaPredicted RBP35.44■■■■□ 3.26
SEMA3B-215ENST00000621029 BAG3O95817 575 aa35.44■■■■□ 3.26
SEMA3B-215ENST00000621029 MAP4K4O95819 1239 aaPredicted RBP35.44■■■■□ 3.26
SEMA3B-215ENST00000621029 PPATQ06203 517 aa35.44■■■■□ 3.26
SEMA3B-215ENST00000621029 TEX11Q8IYF3 940 aa35.44■■■■□ 3.26
SEMA3B-215ENST00000621029 PIH1D3Q9NQM4 214 aaKnown RBP35.43■■■■□ 3.26
SEMA3B-215ENST00000621029 TAF1CQ15572 869 aaPredicted RBP35.42■■■■□ 3.26
SEMA3B-215ENST00000621029 PKN2Q16513 984 aaKnown RBP35.42■■■■□ 3.26
SEMA3B-215ENST00000621029 SIRT2Q8IXJ6 389 aa35.42■■■■□ 3.26
SEMA3B-215ENST00000621029 CLASRPQ8N2M8 674 aaKnown RBP35.42■■■■□ 3.26
SEMA3B-215ENST00000621029 AATFQ9NY61 560 aaKnown RBP eCLIP35.42■■■■□ 3.26
SEMA3B-215ENST00000621029 SH3RF3Q8TEJ3 882 aaPredicted RBP35.41■■■■□ 3.26
SEMA3B-215ENST00000621029 KIF1BPQ96EK5 621 aa35.41■■■■□ 3.26
SEMA3B-215ENST00000621029 IDH1O75874 414 aaKnown RBP35.4■■■■□ 3.26
SEMA3B-215ENST00000621029 FAM43AQ8N2R8 423 aa35.4■■■■□ 3.26
SEMA3B-215ENST00000621029 ZFYVE28Q9HCC9 887 aa35.4■■■■□ 3.26
SEMA3B-215ENST00000621029 PICK1Q9NRD5 415 aa35.4■■■■□ 3.26
SEMA3B-215ENST00000621029 NOL9Q5SY16 702 aaKnown RBP35.39■■■■□ 3.26
SEMA3B-215ENST00000621029 NDUFB9Q9Y6M9 179 aa35.39■■■■□ 3.26
SEMA3B-215ENST00000621029 ATRNL1Q5VV63 1379 aa35.38■■■■□ 3.26
SEMA3B-215ENST00000621029 NPM3O75607 178 aaKnown RBP35.38■■■■□ 3.25
SEMA3B-215ENST00000621029 IFIT2P09913 472 aaKnown RBP35.38■■■■□ 3.25
SEMA3B-215ENST00000621029 PLCG2P16885 1265 aa35.38■■■■□ 3.25
SEMA3B-215ENST00000621029 RAB11FIP3O75154 756 aa35.37■■■■□ 3.25
SEMA3B-215ENST00000621029 SLURP2P0DP57 97 aa35.37■■■■□ 3.25
SEMA3B-215ENST00000621029 OSBPL5Q9H0X9 879 aaPredicted RBP35.37■■■■□ 3.25
SEMA3B-215ENST00000621029 LAMB1P07942 1786 aa35.36■■■■□ 3.25
SEMA3B-215ENST00000621029 PHF20L1A8MW92 1017 aa35.36■■■■□ 3.25
SEMA3B-215ENST00000621029 CYP7A1P22680 504 aa35.36■■■■□ 3.25
SEMA3B-215ENST00000621029 SCYL3Q8IZE3 742 aa35.36■■■■□ 3.25
SEMA3B-215ENST00000621029 ERO1AQ96HE7 468 aa35.36■■■■□ 3.25
SEMA3B-215ENST00000621029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP35.36■■■■□ 3.25
SEMA3B-215ENST00000621029 BTBD19C9JJ37 291 aa35.35■■■■□ 3.25
SEMA3B-215ENST00000621029 SP3Q02447 781 aa35.35■■■■□ 3.25
SEMA3B-215ENST00000621029 ADGRA1Q86SQ6 560 aa35.35■■■■□ 3.25
SEMA3B-215ENST00000621029 HPS5Q9UPZ3 1129 aa35.35■■■■□ 3.25
SEMA3B-215ENST00000621029 TRIM17Q9Y577 477 aa35.35■■■■□ 3.25
SEMA3B-215ENST00000621029 IGSF3O75054 1194 aa35.34■■■■□ 3.25
SEMA3B-215ENST00000621029 CD99L2Q8TCZ2 262 aa35.34■■■■□ 3.25
SEMA3B-215ENST00000621029 YTHDC1Q96MU7 727 aaKnown RBP35.34■■■■□ 3.25
SEMA3B-215ENST00000621029 ZHX2Q9Y6X8 837 aa35.34■■■■□ 3.25
SEMA3B-215ENST00000621029 DOCK2Q92608 1830 aa35.34■■■■□ 3.25
SEMA3B-215ENST00000621029 FAM196BA6NMK8 535 aa35.33■■■■□ 3.25
SEMA3B-215ENST00000621029 PPP4CP60510 307 aa35.33■■■■□ 3.25
SEMA3B-215ENST00000621029 MAP3K10Q02779 954 aa35.33■■■■□ 3.25
SEMA3B-215ENST00000621029 TGFBRAP1Q8WUH2 860 aa35.33■■■■□ 3.25
SEMA3B-215ENST00000621029 ANTXR1Q9H6X2 564 aa35.33■■■■□ 3.25
SEMA3B-215ENST00000621029 CTNND1O60716 968 aaKnown RBP35.32■■■■□ 3.24
SEMA3B-215ENST00000621029 MAP3K12Q12852 859 aa35.32■■■■□ 3.24
SEMA3B-215ENST00000621029 FBXO46Q6PJ61 603 aaPredicted RBP35.32■■■■□ 3.24
SEMA3B-215ENST00000621029 MAPKAPK5Q8IW41 473 aa35.32■■■■□ 3.24
SEMA3B-215ENST00000621029 MAGEB6Q8N7X4 407 aa35.32■■■■□ 3.24
SEMA3B-215ENST00000621029 KCNH4Q9UQ05 1017 aa35.32■■■■□ 3.24
SEMA3B-215ENST00000621029 ZCCHC17Q9NP64 241 aaKnown RBP35.31■■■■□ 3.24
SEMA3B-215ENST00000621029 TBC1D12O60347 775 aa35.3■■■■□ 3.24
SEMA3B-215ENST00000621029 PTPRAP18433 802 aa35.3■■■■□ 3.24
SEMA3B-215ENST00000621029 MAST2Q6P0Q8 1798 aa35.3■■■■□ 3.24
SEMA3B-215ENST00000621029 CXCL11O14625 94 aa35.29■■■■□ 3.24
SEMA3B-215ENST00000621029 DYNLL1P63167 89 aaKnown RBP35.29■■■■□ 3.24
SEMA3B-215ENST00000621029 OTOP1Q7RTM1 612 aa35.29■■■■□ 3.24
SEMA3B-215ENST00000621029 MIGA1Q8NAN2 632 aa35.29■■■■□ 3.24
SEMA3B-215ENST00000621029 TTF1Q15361 905 aaPredicted RBP35.28■■■■□ 3.24
SEMA3B-215ENST00000621029 ANKRD23Q86SG2 305 aa35.28■■■■□ 3.24
SEMA3B-215ENST00000621029 DNAJC2Q99543 621 aaKnown RBP35.28■■■■□ 3.24
SEMA3B-215ENST00000621029 DHX36Q9H2U1 1008 aaKnown RBP35.28■■■■□ 3.24
SEMA3B-215ENST00000621029 EFCC1Q9HA90 598 aa35.28■■■■□ 3.24
SEMA3B-215ENST00000621029 COL2A1P02458 1487 aaPredicted RBP35.28■■■■□ 3.24
SEMA3B-215ENST00000621029 PDHXO00330 501 aa35.27■■■■□ 3.24
SEMA3B-215ENST00000621029 TRIM34Q9BYJ4 488 aa35.27■■■■□ 3.24
SEMA3B-215ENST00000621029 PI4KBQ9UBF8 816 aa35.27■■■■□ 3.24
SEMA3B-215ENST00000621029 TLR2O60603 784 aa35.26■■■■□ 3.24
SEMA3B-215ENST00000621029 SOX10P56693 466 aa35.26■■■■□ 3.24
SEMA3B-215ENST00000621029 FLT1P17948 1338 aa35.26■■■■□ 3.23
SEMA3B-215ENST00000621029 ARHGEF6Q15052 776 aa35.25■■■■□ 3.23
SEMA3B-215ENST00000621029 LRRCC1Q9C099 1032 aa35.25■■■■□ 3.23
SEMA3B-215ENST00000621029 SAP30BPQ9UHR5 308 aaKnown RBP35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms