RNA–Protein interactions for RNA: ENST00000620535.4

NOP2-223, Transcript of NOP2 nucleolar protein, human

TSL 1 (best) BASIC

Gene NOP2, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP2-223	ENST00000620535	MAP3K14	Q99558	947 aa		13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	IGSF3	O75054	1194 aa		13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	CDKL5	O76039	1030 aa		13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	ARID4A	P29374	1257 aa	Predicted RBP	13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	FANCC	Q00597	558 aa		13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	TRIM29	Q14134	588 aa		13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	E4F1	Q66K89	784 aa	Predicted RBP	13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	CPLX2	Q6PUV4	134 aa	Known RBP	13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	WDR19	Q8NEZ3	1342 aa		13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	PATL2	C9JE40	543 aa	Known RBP	13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	MPHOSPH8	Q99549	860 aa		13.32	□□□□□ -0.28
NOP2-223	ENST00000620535	ABCC12	Q96J65	1359 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	GSG1L2	A8MUP6	293 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	FGFR2	P21802	821 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	TDO2	P48775	406 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	METTL16	Q86W50	562 aa	Known RBP	13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	TMEM87B	Q96K49	555 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	SFPQ	P23246	707 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	MAP3K12	Q12852	859 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	NUP133	Q8WUM0	1156 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	SLC4A4	Q9Y6R1	1079 aa		13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.31	□□□□□ -0.28
NOP2-223	ENST00000620535	DDX60	Q8IY21	1712 aa	Known RBP	13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	ITGB4	P16144	1822 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	SERPINC1	P01008	464 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	UQCRFS1P1	P0C7P4	283 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	GSDMD	P57764	484 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	SSRP1	Q08945	709 aa	Known RBP	13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	NR5A1	Q13285	461 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	MFSD6	Q6ZSS7	791 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	GRAMD1C	Q8IYS0	662 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	BPIFA3	Q9BQP9	254 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	KCNH3	Q9ULD8	1083 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	HPSE	Q9Y251	543 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	MYH3	P11055	1940 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	hCG_1642624	A0A1W2PR95	340 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	TMEM232	C9JQI7	657 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	TOB1	P50616	345 aa	Predicted RBP	13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	PDE4B	Q07343	736 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	ZNF827	Q17R98	1081 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	AKNAD1	Q5T1N1	836 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	PDILT	Q8N807	584 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	CNNM3	Q8NE01	707 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	ACSBG1	Q96GR2	724 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	FANCL	Q9NW38	375 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	PCDHA5	Q9Y5H7	936 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	NUP98	P52948	1817 aa		13.3	□□□□□ -0.28
NOP2-223	ENST00000620535	MINDY4B	A8MYZ0	360 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	SLC5A1	P13866	664 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	BMP6	P22004	513 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	CFAP100	Q494V2	611 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	RESP18	Q5W5W9	173 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	SYT10	Q6XYQ8	523 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	LRRN4CL	Q8ND94	238 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	SDR42E1	Q8WUS8	393 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	PPP1R13B	Q96KQ4	1090 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	SLIT2	O94813	1529 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	ATRN	O75882	1429 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	PPP6R2	O75170	966 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	ZSCAN20	P17040	1043 aa	Predicted RBP	13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	UBASH3A	P57075	661 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	TPM4	P67936	248 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	ADGRA1	Q86SQ6	560 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	SGMS1	Q86VZ5	419 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	DIS3L2	Q8IYB7	885 aa	Known RBP	13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	ZNF34	Q8IZ26	560 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	LRP2BP	Q9P2M1	347 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	ABCF2	Q9UG63	623 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	TUBE1	Q9UJT0	475 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	BCL9	O00512	1426 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	MROH5	Q6ZUA9	1318 aa		13.29	□□□□□ -0.28
NOP2-223	ENST00000620535	NOSTRIN	Q8IVI9	506 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	JMY	Q8N9B5	988 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	KIF18A	Q8NI77	898 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	OXER1	Q8TDS5	423 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	IMPACT	Q9P2X3	320 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	EXOC5	O00471	708 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	ELF2	Q15723	593 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	KRBA2	Q6ZNG9	492 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	USP49	Q70CQ1	688 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	PCDHB6	Q9Y5E3	794 aa		13.28	□□□□□ -0.28
NOP2-223	ENST00000620535	POLR2D	O15514	142 aa	Known RBP	13.27	□□□□□ -0.28
NOP2-223	ENST00000620535	FMNL1	O95466	1100 aa	Predicted RBP	13.27	□□□□□ -0.28
NOP2-223	ENST00000620535	LIFR	P42702	1097 aa		13.27	□□□□□ -0.28
NOP2-223	ENST00000620535	WTAP	Q15007	396 aa		13.27	□□□□□ -0.28
NOP2-223	ENST00000620535	PRDM4	Q9UKN5	801 aa		13.27	□□□□□ -0.28
NOP2-223	ENST00000620535	ECM29	Q5VYK3	1845 aa		13.27	□□□□□ -0.28
NOP2-223	ENST00000620535	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.27	□□□□□ -0.29
NOP2-223	ENST00000620535	CYP2D7	A0A087X1C5	515 aa		13.27	□□□□□ -0.29
NOP2-223	ENST00000620535	FAM205C	A6NFA0	338 aa		13.27	□□□□□ -0.29
NOP2-223	ENST00000620535	PRR29	P0C7W0	189 aa		13.27	□□□□□ -0.29
NOP2-223	ENST00000620535	IL6ST	P40189	918 aa	Predicted RBP	13.27	□□□□□ -0.29
NOP2-223	ENST00000620535	MYL5	Q02045	173 aa		13.27	□□□□□ -0.29
NOP2-223	ENST00000620535	RTN1	Q16799	776 aa		13.27	□□□□□ -0.29
NOP2-223	ENST00000620535	TRMT44	Q8IYL2	757 aa	Known RBP	13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms