RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 ARGLU1Q9NWB6 273 aaPredicted RBP10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 PYCARDQ9ULZ3 195 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 JAG2Q9Y219 1238 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 SLIT3O75094 1523 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 BAG3O95817 575 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 AFMP43652 599 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 MYL5Q02045 173 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 PPARAQ07869 468 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 NRBP1Q9UHY1 535 aa10.56□□□□□ -0.72
RBFOX1-223ENST00000620507 BMP15O95972 392 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 NLRP12P59046 1061 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 FAM98CQ17RN3 349 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 C11orf57Q6ZUT1 292 aaPredicted RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 AIFM3Q96NN9 605 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 ZSWIM5Q9P217 1185 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 STX8Q9UNK0 236 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 RTCBQ9Y3I0 505 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 CCDC194A0A1B0GVG4 234 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 SH2B2O14492 632 aaPredicted RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 GNPATO15228 680 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 TOM1O60784 492 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 ZNF654Q8IZM8 581 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 RPGRQ92834 1020 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 MCM9Q9NXL9 1143 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 BTBD18B2RXH4 712 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 ZSCAN12O43309 604 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 PRKAB2O43741 272 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 LDHCP07864 332 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 HIBADHP31937 336 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 KRT2P35908 639 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 SLC39A14Q15043 492 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 TBC1D10CQ8IV04 446 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 NOSTRINQ8IVI9 506 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 KIAA1524Q8TCG1 905 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 DHX58Q96C10 678 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 ANKRD2Q9GZV1 360 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 V9GY48 417 aaPredicted RBP10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 ABCC12Q96J65 1359 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 STIM1Q13586 685 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 LRP10Q7Z4F1 713 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 CCDC24Q8N4L8 307 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 FANCBQ8NB91 859 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 MRFAP1L1Q96HT8 127 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 TRIM34Q9BYJ4 488 aa10.55□□□□□ -0.72
RBFOX1-223ENST00000620507 CHD2O14647 1828 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 POLR2DO15514 142 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 TFCP2L1Q9NZI6 479 aa10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 COL15A1P39059 1388 aa10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 MAGEC2Q9UBF1 373 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 CTDNEP1O95476 244 aa10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 LCORLQ8N3X6 602 aa10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 AATFQ9NY61 560 aaKnown RBP eCLIP10.54□□□□□ -0.72
RBFOX1-223ENST00000620507 KIF1AQ12756 1690 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 hCG_1642624A0A1W2PR95 340 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 LIFRP42702 1097 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 FANCCQ00597 558 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 CYB5R4Q7L1T6 521 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 CPLX3Q8WVH0 158 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 CLIC6Q96NY7 704 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 INCENPQ9NQS7 918 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 RBM28Q9NW13 759 aaKnown RBP10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 TNKSO95271 1327 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 USP17L12C9JPN9 530 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 USP17L21D6R901 530 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 URI1O94763 535 aaPredicted RBP10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 RBM6P78332 1123 aaKnown RBP10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 DPCR1Q3MIW9 517 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 XPO4Q9C0E2 1151 aaKnown RBP10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 GOLPH3LQ9H4A5 285 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 TSPY3P0CV98 308 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 TSPY8P0CW00 308 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 PNOCQ13519 176 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 WDR19Q8NEZ3 1342 aa10.53□□□□□ -0.72
RBFOX1-223ENST00000620507 UBXN4Q92575 508 aa10.52□□□□□ -0.72
RBFOX1-223ENST00000620507 VPS54Q9P1Q0 977 aa10.52□□□□□ -0.72
RBFOX1-223ENST00000620507 SEC63Q9UGP8 760 aaKnown RBP10.52□□□□□ -0.72
RBFOX1-223ENST00000620507 C6orf229H3BNL8 230 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 LDHBP07195 334 aaKnown RBP10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 GSTO1P78417 241 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 LRRC8AQ8IWT6 810 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 CACTINQ8WUQ7 758 aaKnown RBP10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 TSC1Q92574 1164 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 IMPACTQ9P2X3 320 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 IFNAR1P17181 557 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 UBA7P41226 1012 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 KCNQ4P56696 695 aa10.52□□□□□ -0.73
RBFOX1-223ENST00000620507 CBX1P83916 185 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms