RNA–Protein interactions for RNA: ENST00000620323.1

USP12-203, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 3 BASIC

Gene USP12, Length 349 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-203ENST00000620323 SYNGAP1Q96PV0 1343 aa6.17□□□□□ -1.42
USP12-203ENST00000620323 NPIPB6E9PJ23 425 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 ZNF862O60290 1169 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 FZD6O60353 706 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 ID3Q02535 119 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 EHHADHQ08426 723 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 ALKBH2Q6NS38 261 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 MPZL3Q6UWV2 235 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 GALNT12Q8IXK2 581 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 DDX54Q8TDD1 881 aaKnown RBP6.16□□□□□ -1.42
USP12-203ENST00000620323 RAPGEFL1Q9UHV5 662 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 JAG2Q9Y219 1238 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 PCDHGC5Q9Y5F6 944 aa6.16□□□□□ -1.42
USP12-203ENST00000620323 NEFMP07197 916 aa6.15□□□□□ -1.42
USP12-203ENST00000620323 GLI1P08151 1106 aa6.15□□□□□ -1.42
USP12-203ENST00000620323 NFIBO00712 420 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 AFMP43652 599 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 ZNF157P51786 506 aaPredicted RBP6.14□□□□□ -1.43
USP12-203ENST00000620323 AP3B2Q13367 1082 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 USPL1Q5W0Q7 1092 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 SPACA3Q8IXA5 215 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 DIRC2Q96SL1 478 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 CCDC87Q9NVE4 849 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 SNX11Q9Y5W9 270 aa6.14□□□□□ -1.43
USP12-203ENST00000620323 ITPKAP23677 461 aa6.13□□□□□ -1.43
USP12-203ENST00000620323 USP5P45974 858 aa6.13□□□□□ -1.43
USP12-203ENST00000620323 CTSWP56202 376 aa6.13□□□□□ -1.43
USP12-203ENST00000620323 GJD3Q8N144 294 aa6.13□□□□□ -1.43
USP12-203ENST00000620323 ISL2Q96A47 359 aa6.13□□□□□ -1.43
USP12-203ENST00000620323 SLFN14P0C7P3 912 aa6.12□□□□□ -1.43
USP12-203ENST00000620323 AMIGO3Q86WK7 504 aa6.12□□□□□ -1.43
USP12-203ENST00000620323 FBXO15Q8NCQ5 510 aaPredicted RBP6.12□□□□□ -1.43
USP12-203ENST00000620323 ASB11Q8WXH4 323 aa6.12□□□□□ -1.43
USP12-203ENST00000620323 C20orf173Q96LM9 149 aa6.12□□□□□ -1.43
USP12-203ENST00000620323 NSUN3Q9H649 340 aaKnown RBP6.12□□□□□ -1.43
USP12-203ENST00000620323 C19orf73Q9NVV2 129 aa6.12□□□□□ -1.43
USP12-203ENST00000620323 PCOLCE2Q9UKZ9 415 aa6.12□□□□□ -1.43
USP12-203ENST00000620323 NPR3P17342 541 aa6.11□□□□□ -1.43
USP12-203ENST00000620323 FAAP100Q0VG06 881 aa6.11□□□□□ -1.43
USP12-203ENST00000620323 NKPD1Q17RQ9 610 aa6.11□□□□□ -1.43
USP12-203ENST00000620323 KIF4BQ2VIQ3 1234 aa6.11□□□□□ -1.43
USP12-203ENST00000620323 TMEM67Q5HYA8 995 aa6.11□□□□□ -1.43
USP12-203ENST00000620323 CYFIP1Q7L576 1253 aa6.11□□□□□ -1.43
USP12-203ENST00000620323 PITPNM2Q9BZ72 1349 aa6.1□□□□□ -1.43
USP12-203ENST00000620323 PRKCSHP14314 528 aaPredicted RBP6.1□□□□□ -1.43
USP12-203ENST00000620323 HOXA5P20719 270 aa6.1□□□□□ -1.43
USP12-203ENST00000620323 KCNA10Q16322 511 aa6.1□□□□□ -1.43
USP12-203ENST00000620323 KIAA0319Q5VV43 1072 aa6.1□□□□□ -1.43
USP12-203ENST00000620323 EHD4Q9H223 541 aa6.1□□□□□ -1.43
USP12-203ENST00000620323 CD320Q9NPF0 282 aa6.1□□□□□ -1.43
USP12-203ENST00000620323 ATG14Q6ZNE5 492 aa6.09□□□□□ -1.43
USP12-203ENST00000620323 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.09□□□□□ -1.43
USP12-203ENST00000620323 CARS2Q9HA77 564 aaKnown RBP6.09□□□□□ -1.43
USP12-203ENST00000620323 ABCB6Q9NP58 842 aa6.09□□□□□ -1.43
USP12-203ENST00000620323 SSU72Q9NP77 194 aaKnown RBP6.09□□□□□ -1.43
USP12-203ENST00000620323 GSTP1P09211 210 aaKnown RBP6.08□□□□□ -1.44
USP12-203ENST00000620323 TMEM253P0C7T8 217 aa6.08□□□□□ -1.44
USP12-203ENST00000620323 NPHS2Q9NP85 383 aa6.08□□□□□ -1.44
USP12-203ENST00000620323 FAM13AO94988 1023 aa6.07□□□□□ -1.44
USP12-203ENST00000620323 CIAPIN1Q6FI81 312 aa6.07□□□□□ -1.44
USP12-203ENST00000620323 UBE3DQ7Z6J8 389 aa6.07□□□□□ -1.44
USP12-203ENST00000620323 KRT82Q9NSB4 513 aa6.07□□□□□ -1.44
USP12-203ENST00000620323 GTF2IRD1Q9UHL9 959 aa6.07□□□□□ -1.44
USP12-203ENST00000620323 IGF2BP3O00425 579 aaKnown RBP eCLIP6.06□□□□□ -1.44
USP12-203ENST00000620323 KCNB2Q92953 911 aa6.06□□□□□ -1.44
USP12-203ENST00000620323 ANO2Q9NQ90 1003 aa6.06□□□□□ -1.44
USP12-203ENST00000620323 ETV2O00321 342 aaPredicted RBP6.05□□□□□ -1.44
USP12-203ENST00000620323 PTPN12Q05209 780 aaKnown RBP6.05□□□□□ -1.44
USP12-203ENST00000620323 PDZD3Q86UT5 571 aa6.05□□□□□ -1.44
USP12-203ENST00000620323 RNF214Q8ND24 703 aa6.05□□□□□ -1.44
USP12-203ENST00000620323 STK35Q8TDR2 534 aa6.05□□□□□ -1.44
USP12-203ENST00000620323 ATP13A1Q9HD20 1204 aa6.05□□□□□ -1.44
USP12-203ENST00000620323 DCP1AQ9NPI6 582 aaPredicted RBP6.05□□□□□ -1.44
USP12-203ENST00000620323 PRDM10Q9NQV6 1147 aa6.05□□□□□ -1.44
USP12-203ENST00000620323 SMG5Q9UPR3 1016 aaKnown RBP6.05□□□□□ -1.44
USP12-203ENST00000620323 TCAF2A6NFQ2 919 aa6.04□□□□□ -1.44
USP12-203ENST00000620323 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
USP12-203ENST00000620323 GDNFP39905 211 aa6.04□□□□□ -1.44
USP12-203ENST00000620323 CLCN7P51798 805 aa6.04□□□□□ -1.44
USP12-203ENST00000620323 ORC1Q13415 861 aa6.04□□□□□ -1.44
USP12-203ENST00000620323 ZC3H12AQ5D1E8 599 aaKnown RBP6.04□□□□□ -1.44
USP12-203ENST00000620323 RELTQ969Z4 430 aa6.04□□□□□ -1.44
USP12-203ENST00000620323 PBXIP1Q96AQ6 731 aa6.04□□□□□ -1.44
USP12-203ENST00000620323 TMEM238LA0A1B0GVL6 79 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 GNAT3A8MTJ3 354 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 RBAK-RBAKDNI3L0D1 243 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 NUAK1O60285 661 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 EOMESO95936 686 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 SSFA2P28290 1259 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 LINC00310P59036 64 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 ZNF211Q13398 564 aaPredicted RBP6.03□□□□□ -1.44
USP12-203ENST00000620323 RPS26P11Q5JNZ5 115 aaPredicted RBP6.03□□□□□ -1.44
USP12-203ENST00000620323 PRPF40BQ6NWY9 871 aaKnown RBP6.03□□□□□ -1.44
USP12-203ENST00000620323 HSPA12BQ96MM6 686 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 IRF2BPLQ9H1B7 796 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 EPB41L4BQ9H329 900 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 SEMA3GQ9NS98 782 aa6.03□□□□□ -1.44
USP12-203ENST00000620323 PRR33A8MZF0 331 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms