RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 NRSN2Q9GZP1 204 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 MRPL18Q9H0U6 180 aaKnown RBP6.52□□□□□ -1.37
SEM1-220ENST00000619259 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
SEM1-220ENST00000619259 POLA1P09884 1462 aaPredicted RBP6.52□□□□□ -1.37
SEM1-220ENST00000619259 TM4SF5O14894 197 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 DLGAP3O95886 979 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 DNAJA1P31689 397 aaKnown RBP6.51□□□□□ -1.37
SEM1-220ENST00000619259 MCM4P33991 863 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 ZEB1P37275 1124 aaPredicted RBP6.51□□□□□ -1.37
SEM1-220ENST00000619259 PTPN11Q06124 597 aaPredicted RBP6.51□□□□□ -1.37
SEM1-220ENST00000619259 APOBRQ0VD83 1088 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 AGGF1Q8N302 714 aaeCLIP6.51□□□□□ -1.37
SEM1-220ENST00000619259 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
SEM1-220ENST00000619259 NKD1Q969G9 470 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 ELMO3Q96BJ8 720 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 GPRASP2Q96D09 838 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 WDR89Q96FK6 387 aaPredicted RBP6.51□□□□□ -1.37
SEM1-220ENST00000619259 EAF1Q96JC9 268 aaPredicted RBP6.51□□□□□ -1.37
SEM1-220ENST00000619259 RNF208Q9H0X6 261 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 PICK1Q9NRD5 415 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 PPP1R1BQ9UD71 204 aaPredicted RBP6.51□□□□□ -1.37
SEM1-220ENST00000619259 CSADQ9Y600 493 aa6.51□□□□□ -1.37
SEM1-220ENST00000619259 NESP48681 1621 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 DCDC2CA8MYV0 355 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 ZNF862O60290 1169 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 AOC2O75106 756 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 ALX3O95076 343 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 GARTP22102 1010 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 SEZ6Q53EL9 994 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
SEM1-220ENST00000619259 FAM196AQ6ZSG2 479 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 KIAA1211Q6ZU35 1233 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 CCDC84Q86UT8 332 aaPredicted RBP6.5□□□□□ -1.37
SEM1-220ENST00000619259 FBXO27Q8NI29 283 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 GATAD2BQ8WXI9 593 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 C8orf37Q96NL8 207 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 CYP4F12Q9HCS2 524 aa6.5□□□□□ -1.37
SEM1-220ENST00000619259 URB2Q14146 1524 aaKnown RBP6.5□□□□□ -1.37
SEM1-220ENST00000619259 ARAP1Q96P48 1450 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 CARMIL1Q5VZK9 1371 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 SART1O43290 800 aaKnown RBP6.49□□□□□ -1.37
SEM1-220ENST00000619259 SELPP16109 830 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 COL8A1P27658 744 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 CWF19L2Q2TBE0 894 aaKnown RBP6.49□□□□□ -1.37
SEM1-220ENST00000619259 SCARA3Q6AZY7 606 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 FDX2Q6P4F2 183 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 C12orf40Q86WS4 652 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 GAL3ST3Q96A11 431 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 TINF2Q9BSI4 451 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 WDR18Q9BV38 432 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 USP35Q9P2H5 1018 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 AP4E1Q9UPM8 1137 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 WDR97A6NE52 1622 aa6.49□□□□□ -1.37
SEM1-220ENST00000619259 PRAMEF27A3QJZ7 478 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 C9orf172C9J069 976 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 GREM1O60565 184 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 DRD2P14416 443 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 GLB1P16278 677 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 CDK8P49336 464 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 RPL6Q02878 288 aaKnown RBP6.48□□□□□ -1.37
SEM1-220ENST00000619259 ARID5AQ03989 594 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 MPP2Q14168 576 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 INPP5AQ14642 412 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 KIF4BQ2VIQ3 1234 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 WIPI1Q5MNZ9 446 aaPredicted RBP6.48□□□□□ -1.37
SEM1-220ENST00000619259 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.48□□□□□ -1.37
SEM1-220ENST00000619259 HDXQ7Z353 690 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 TMPRSS13Q9BYE2 586 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 TANGO6Q9C0B7 1094 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 AKTIPQ9H8T0 292 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 EFR3BQ9Y2G0 817 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 CUL7Q14999 1698 aa6.48□□□□□ -1.37
SEM1-220ENST00000619259 ROBO2Q9HCK4 1378 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 MAP3K1Q13233 1512 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 FAM221AA4D161 298 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 MEGF11A6BM72 1044 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 F8W735 103 aaPredicted RBP6.47□□□□□ -1.37
SEM1-220ENST00000619259 RNF225M0QZC1 329 aaPredicted RBP6.47□□□□□ -1.37
SEM1-220ENST00000619259 GRIN3BO60391 1043 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 CILPO75339 1184 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 CRKP46108 304 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 NRG1Q02297 640 aaPredicted RBP6.47□□□□□ -1.37
SEM1-220ENST00000619259 ID3Q02535 119 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 FBXW10Q5XX13 1052 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 DYMQ7RTS9 669 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 CPLX3Q8WVH0 158 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 LENG1Q96BZ8 264 aaPredicted RBP6.47□□□□□ -1.37
SEM1-220ENST00000619259 PLPPR2Q96GM1 343 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 SPATA32Q96LK8 384 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 KCNQ5Q9NR82 932 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 ARHGAP35Q9NRY4 1499 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 ABCA5Q8WWZ7 1642 aa6.47□□□□□ -1.37
SEM1-220ENST00000619259 GJA8P48165 433 aa6.46□□□□□ -1.38
SEM1-220ENST00000619259 IREB2P48200 963 aaKnown RBP6.46□□□□□ -1.38
SEM1-220ENST00000619259 NASPP49321 788 aaPredicted RBP6.46□□□□□ -1.38
SEM1-220ENST00000619259 SOX4Q06945 474 aaPredicted RBP6.46□□□□□ -1.38
SEM1-220ENST00000619259 LRFN4Q6PJG9 635 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms