RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LDHBP07195 334 aaKnown RBP20.28■□□□□ 0.84
PCDHGC3-205ENST00000617641 GRIK5Q16478 980 aa20.28■□□□□ 0.84
PCDHGC3-205ENST00000617641 CTR9Q6PD62 1173 aa20.28■□□□□ 0.84
PCDHGC3-205ENST00000617641 CRNKL1Q9BZJ0 848 aaKnown RBP20.28■□□□□ 0.84
PCDHGC3-205ENST00000617641 RBSNQ9H1K0 784 aa20.28■□□□□ 0.84
PCDHGC3-205ENST00000617641 MYH15Q9Y2K3 1946 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 GOLGA8AA7E2F4 631 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 CCDC183Q5T5S1 534 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 GIMAP6Q6P9H5 292 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 C8orf76Q96K31 380 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 SLC12A7Q9Y666 1083 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 CD209Q9NNX6 404 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
PCDHGC3-205ENST00000617641 USP17L12C9JPN9 530 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 USP17L21D6R901 530 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 EVX2Q03828 476 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 WTAPQ15007 396 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 DCP1AQ9NPI6 582 aaPredicted RBP20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 GJB4Q9NTQ9 266 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 DUOX1Q9NRD9 1551 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 NASPP49321 788 aaPredicted RBP20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 TBC1D16Q8TBP0 767 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
PCDHGC3-205ENST00000617641 TNS1Q9HBL0 1735 aaKnown RBP20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 NRXN2Q9P2S2 1712 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 PPEF1O14829 653 aaPredicted RBP20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 TMED8Q6PL24 325 aaPredicted RBP20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 ESR2Q92731 530 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 PHKBQ93100 1093 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 KIAA1551Q9HCM1 1747 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 ERICH2A1L162 156 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 CDKL5O76039 1030 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 MMP10P09238 476 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 CEBPZQ03701 1054 aaKnown RBP20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 DIXDC1Q155Q3 683 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 FBXO18Q8NFZ0 1043 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 UBAC1Q9BSL1 405 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 FTOQ9C0B1 505 aaKnown RBP eCLIP20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 LRRC37AA6NMS7 1700 aa20.25■□□□□ 0.83
PCDHGC3-205ENST00000617641 PRDM1O75626 825 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 NTRK3Q16288 839 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 MSL1Q68DK7 614 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 CPLX2Q6PUV4 134 aaKnown RBP20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 SYNE3Q6ZMZ3 975 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 AIFM3Q96NN9 605 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 ATP8A2Q9NTI2 1148 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 CFAP45Q9UL16 551 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 RANBP6O60518 1105 aaKnown RBP20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 IL1R1P14778 569 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 MTA3Q9BTC8 594 aa20.24■□□□□ 0.83
PCDHGC3-205ENST00000617641 MYH2Q9UKX2 1941 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 LTBP1Q14766 1721 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 SRGNP10124 158 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 CYP2D6P10635 497 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 LIG1P18858 919 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 PGBD1Q96JS3 809 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 LAMB1P07942 1786 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 TNKSO95271 1327 aa20.23■□□□□ 0.83
PCDHGC3-205ENST00000617641 GOLGA6L4A6NEF3 574 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 SP8Q8IXZ3 490 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 TSPY26PQ9H489 355 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 ECM29Q5VYK3 1845 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 FGRP09769 529 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 SEC23AQ15436 765 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 USP28Q96RU2 1077 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 TAOK2Q9UL54 1235 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 NID2Q14112 1375 aa20.22■□□□□ 0.83
PCDHGC3-205ENST00000617641 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 GSTO1P78417 241 aa20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 TMC4Q7Z404 712 aa20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 TMTC2Q8N394 836 aa20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 ATP6V0A2Q9Y487 856 aa20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 ZNF654Q8IZM8 581 aa20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 ZNF396Q96N95 335 aaPredicted RBP20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 ARPP21Q9UBL0 812 aaPredicted RBP20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 RGS17Q9UGC6 210 aaPredicted RBP20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.21■□□□□ 0.83
PCDHGC3-205ENST00000617641 UBE2Q2LH0YL09 131 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 NPR1P16066 1061 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 RTN1Q16799 776 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 ENAHQ8N8S7 591 aaPredicted RBP20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 MCM9Q9NXL9 1143 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 COL11A2P13942 1736 aaPredicted RBP20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 USP17L8P0C7I0 530 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 PCP11498 1178 aaKnown RBP20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 SBK1Q52WX2 424 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 NUP133Q8WUM0 1156 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 SLC26A6Q9BXS9 759 aa20.2■□□□□ 0.82
PCDHGC3-205ENST00000617641 KIF28PB7ZC32 967 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms