RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 DCP1AQ9NPI6 582 aaPredicted RBP16.18■□□□□ 0.18
CPEB1-213ENST00000617462 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
CPEB1-213ENST00000617462 USP17L12C9JPN9 530 aa16.18■□□□□ 0.18
CPEB1-213ENST00000617462 USP17L21D6R901 530 aa16.18■□□□□ 0.18
CPEB1-213ENST00000617462 MMP10P09238 476 aa16.18■□□□□ 0.18
CPEB1-213ENST00000617462 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.18
CPEB1-213ENST00000617462 NTRK3Q16288 839 aa16.18■□□□□ 0.18
CPEB1-213ENST00000617462 SGMS1Q86VZ5 419 aa16.18■□□□□ 0.18
CPEB1-213ENST00000617462 PGBD1Q96JS3 809 aa16.18■□□□□ 0.18
CPEB1-213ENST00000617462 ANAPC4Q9UJX5 808 aa16.18■□□□□ 0.18
CPEB1-213ENST00000617462 LIG1P18858 919 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 LRSAM1Q6UWE0 723 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 CMTR1Q8N1G2 835 aaKnown RBP16.17■□□□□ 0.18
CPEB1-213ENST00000617462 BRIP1Q9BX63 1249 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 KIF28PB7ZC32 967 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 C15orf52Q6ZUT6 534 aaKnown RBP16.17■□□□□ 0.18
CPEB1-213ENST00000617462 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
CPEB1-213ENST00000617462 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 KRT23Q9C075 422 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 CNNM2Q9H8M5 875 aa16.17■□□□□ 0.18
CPEB1-213ENST00000617462 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
CPEB1-213ENST00000617462 ZBTB43O43298 467 aa16.16■□□□□ 0.18
CPEB1-213ENST00000617462 SRGNP10124 158 aa16.16■□□□□ 0.18
CPEB1-213ENST00000617462 LIFRP42702 1097 aa16.16■□□□□ 0.18
CPEB1-213ENST00000617462 ZNF804AQ7Z570 1209 aa16.16■□□□□ 0.18
CPEB1-213ENST00000617462 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
CPEB1-213ENST00000617462 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 CPLX1O14810 134 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 NMT2O60551 498 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 BBOX1O75936 387 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 LDHBP07195 334 aaKnown RBP16.15■□□□□ 0.18
CPEB1-213ENST00000617462 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 SEC23AQ15436 765 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
CPEB1-213ENST00000617462 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 GOLGA8AA7E2F4 631 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 ATP2B4P23634 1241 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 GUCY1A2P33402 732 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
CPEB1-213ENST00000617462 ADAMTSL1Q8N6G6 1762 aa16.15■□□□□ 0.18
CPEB1-213ENST00000617462 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 PDIA4P13667 645 aaKnown RBP16.14■□□□□ 0.17
CPEB1-213ENST00000617462 IL1R1P14778 569 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 EN1Q05925 392 aaPredicted RBP16.14■□□□□ 0.17
CPEB1-213ENST00000617462 C8orf76Q96K31 380 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 PDGFDQ9GZP0 370 aaPredicted RBP16.14■□□□□ 0.17
CPEB1-213ENST00000617462 MKRN1Q9UHC7 482 aaKnown RBP16.14■□□□□ 0.17
CPEB1-213ENST00000617462 SLC12A7Q9Y666 1083 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 ELP1O95163 1332 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 TNKSO95271 1327 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 NAV1Q8NEY1 1877 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 WTAPQ15007 396 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 CCDC82Q8N4S0 544 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 ENAHQ8N8S7 591 aaPredicted RBP16.14■□□□□ 0.17
CPEB1-213ENST00000617462 RNF214Q8ND24 703 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 FBXO18Q8NFZ0 1043 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 WDR66Q8TBY9 1149 aa16.14■□□□□ 0.17
CPEB1-213ENST00000617462 ZSCAN16Q9H4T2 348 aaPredicted RBP16.14■□□□□ 0.17
CPEB1-213ENST00000617462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.14■□□□□ 0.17
CPEB1-213ENST00000617462 CCDC69A6NI79 296 aa16.13■□□□□ 0.17
CPEB1-213ENST00000617462 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
CPEB1-213ENST00000617462 FGRP09769 529 aa16.13■□□□□ 0.17
CPEB1-213ENST00000617462 CCDC183Q5T5S1 534 aa16.13■□□□□ 0.17
CPEB1-213ENST00000617462 GIMAP6Q6P9H5 292 aa16.13■□□□□ 0.17
CPEB1-213ENST00000617462 MXD3Q9BW11 206 aa16.13■□□□□ 0.17
CPEB1-213ENST00000617462 CRNKL1Q9BZJ0 848 aaKnown RBP16.13■□□□□ 0.17
CPEB1-213ENST00000617462 MYH6P13533 1939 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 ZBTB22O15209 634 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
CPEB1-213ENST00000617462 NASPP49321 788 aaPredicted RBP16.12■□□□□ 0.17
CPEB1-213ENST00000617462 DYNLL2Q96FJ2 89 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 RTFDC1Q9BY42 306 aaPredicted RBP16.12■□□□□ 0.17
CPEB1-213ENST00000617462 SCAND2PQ9GZW5 306 aaPredicted RBP16.12■□□□□ 0.17
CPEB1-213ENST00000617462 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
CPEB1-213ENST00000617462 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 SLX4Q8IY92 1834 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 BAZ2BQ9UIF8 2168 aaKnown RBP16.12■□□□□ 0.17
CPEB1-213ENST00000617462 RGPD3A6NKT7 1758 aaPredicted RBP16.12■□□□□ 0.17
CPEB1-213ENST00000617462 RGPD4Q7Z3J3 1758 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 ALG1Q9BT22 464 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 MCM9Q9NXL9 1143 aa16.12■□□□□ 0.17
CPEB1-213ENST00000617462 SPTY2D1Q68D10 685 aaPredicted RBP16.11■□□□□ 0.17
CPEB1-213ENST00000617462 NBPF11Q86T75 865 aa16.11■□□□□ 0.17
CPEB1-213ENST00000617462 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
CPEB1-213ENST00000617462 NUP133Q8WUM0 1156 aa16.11■□□□□ 0.17
CPEB1-213ENST00000617462 ESR2Q92731 530 aa16.11■□□□□ 0.17
CPEB1-213ENST00000617462 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
CPEB1-213ENST00000617462 SLC26A6Q9BXS9 759 aa16.11■□□□□ 0.17
CPEB1-213ENST00000617462 NID2Q14112 1375 aa16.11■□□□□ 0.17
CPEB1-213ENST00000617462 KIF23Q02241 960 aaPredicted RBP16.1■□□□□ 0.17
CPEB1-213ENST00000617462 CAMK4Q16566 473 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms