RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	ZCRB1	Q8TBF4	217 aa	Known RBP	13.18	□□□□□ -0.3
TP53-222	ENST00000617185	FAM210A	Q96ND0	272 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	PNKP	Q96T60	521 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	BPIFA3	Q9BQP9	254 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	ETAA1	Q9NY74	926 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	RAB11FIP3	O75154	756 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	CHGB	P05060	677 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	AARS	P49588	968 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
TP53-222	ENST00000617185	GRIK3	Q13003	919 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	WLS	Q5T9L3	541 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	IQCA1	Q86XH1	822 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	SMARCC1	Q92922	1105 aa	Predicted RBP	13.18	□□□□□ -0.3
TP53-222	ENST00000617185	TATDN2	Q93075	761 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	EAF2	Q96CJ1	260 aa	Predicted RBP	13.18	□□□□□ -0.3
TP53-222	ENST00000617185	BOLA2	Q9H3K6	86 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	ZSWIM4	Q9H7M6	989 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	VIPAS39	Q9H9C1	493 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	ZSWIM6	Q9HCJ5	1215 aa		13.18	□□□□□ -0.3
TP53-222	ENST00000617185	CAMTA1	Q9Y6Y1	1673 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	ALDH1L1	O75891	902 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	GCKR	Q14397	625 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	CCAR1	Q8IX12	1150 aa	Known RBP	13.17	□□□□□ -0.3
TP53-222	ENST00000617185	JAKMIP1	Q96N16	626 aa	Known RBP	13.17	□□□□□ -0.3
TP53-222	ENST00000617185	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.17	□□□□□ -0.3
TP53-222	ENST00000617185	SH3GL3	Q99963	347 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	CD248	Q9HCU0	757 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	ATXN2	Q99700	1313 aa	Known RBP	13.17	□□□□□ -0.3
TP53-222	ENST00000617185		A0A087WWV3	80 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	SHTN1	A0MZ66	631 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	PRPF6	O94906	941 aa	Known RBP	13.17	□□□□□ -0.3
TP53-222	ENST00000617185	ARMC2	Q8NEN0	867 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	XAGE2	Q96GT9	111 aa		13.17	□□□□□ -0.3
TP53-222	ENST00000617185	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.16	□□□□□ -0.3
TP53-222	ENST00000617185		A0A087WZG4	1122 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	NBPF26	B4DH59	902 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	RTN2	O75298	545 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	FSBP	O95073	299 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.16	□□□□□ -0.3	2e-6	■□□□□ 9.5
TP53-222	ENST00000617185	NBPF14	Q5TI25	921 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	NBPF15	Q8N660	670 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	ZNF483	Q8TF39	744 aa	Predicted RBP	13.16	□□□□□ -0.3
TP53-222	ENST00000617185	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.16	□□□□□ -0.3
TP53-222	ENST00000617185	BORCS6	Q96GS4	357 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.16	□□□□□ -0.3
TP53-222	ENST00000617185	COL18A1	P39060	1754 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	WDR17	Q8IZU2	1322 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	FNTA	P49354	379 aa		13.16	□□□□□ -0.3
TP53-222	ENST00000617185	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.15	□□□□□ -0.3
TP53-222	ENST00000617185	CLSTN1	O94985	981 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	SYF2	O95926	243 aa	Known RBP	13.15	□□□□□ -0.3
TP53-222	ENST00000617185	LRP10	Q7Z4F1	713 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	ANKRD18A	Q8IVF6	992 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	METTL22	Q9BUU2	404 aa	Predicted RBP	13.15	□□□□□ -0.3
TP53-222	ENST00000617185	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.15	□□□□□ -0.3
TP53-222	ENST00000617185	CDHR2	Q9BYE9	1310 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	XIRP1	Q702N8	1843 aa	Known RBP	13.15	□□□□□ -0.3
TP53-222	ENST00000617185	MYO1F	O00160	1098 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	ICA1	Q05084	483 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	TUBB2A	Q13885	445 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	CNTROB	Q8N137	903 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	TUBB2B	Q9BVA1	445 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	TPCN1	Q9ULQ1	816 aa		13.15	□□□□□ -0.3
TP53-222	ENST00000617185	DCC	P43146	1447 aa		13.15	□□□□□ -0.31
TP53-222	ENST00000617185	IPO7	O95373	1038 aa	Known RBP	13.14	□□□□□ -0.31
TP53-222	ENST00000617185	IRAK1	P51617	712 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	CCNH	P51946	323 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-222	ENST00000617185	VSNL1	P62760	191 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	FAM160A1	Q05DH4	1040 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	COL9A3	Q14050	684 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-222	ENST00000617185	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.14	□□□□□ -0.31
TP53-222	ENST00000617185	OTUD6B	Q8N6M0	293 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	IGSF22	Q8N9C0	903 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	BCAS4	Q8TDM0	211 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	FBXW7	Q969H0	707 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	FAM227B	Q96M60	508 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	BTG4	Q9NY30	223 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	PUF60	Q9UHX1	559 aa	Known RBP	13.14	□□□□□ -0.31
TP53-222	ENST00000617185	LMTK3	Q96Q04	1460 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	KIAA0754	O94854	1291 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	IL2RB	P14784	551 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	FANCC	Q00597	558 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	PTH1R	Q03431	593 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	KIF4B	Q2VIQ3	1234 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	NUCKS1	Q9H1E3	243 aa	Known RBP	13.14	□□□□□ -0.31
TP53-222	ENST00000617185	CDC23	Q9UJX2	597 aa		13.14	□□□□□ -0.31
TP53-222	ENST00000617185	SIPA1L3	O60292	1781 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-222	ENST00000617185	SCN11A	Q9UI33	1791 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	CBFA2T2	O43439	604 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	ADCK5	Q3MIX3	580 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	B4GALNT4	Q76KP1	1039 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	GOLPH3L	Q9H4A5	285 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	ECHDC1	Q9NTX5	307 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
TP53-222	ENST00000617185	CLNS1A	P54105	237 aa	Known RBP	13.13	□□□□□ -0.31
TP53-222	ENST00000617185	RWDD2B	P57060	319 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	REST	Q13127	1097 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	HSP90AB4P	Q58FF6	505 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	SPATS2	Q86XZ4	545 aa	Known RBP	13.13	□□□□□ -0.31
TP53-222	ENST00000617185	ENGASE	Q8NFI3	743 aa		13.13	□□□□□ -0.31
TP53-222	ENST00000617185	CCDC26	Q8TAB7	109 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms