RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 ZSWIM6Q9HCJ5 1215 aa18.04■□□□□ 0.48
CBWD1-225ENST00000616944 USP40Q9NVE5 1235 aa18.04■□□□□ 0.48
CBWD1-225ENST00000616944 ARPP21Q9UBL0 812 aaPredicted RBP18.04■□□□□ 0.48
CBWD1-225ENST00000616944 USP17L12C9JPN9 530 aa18.03■□□□□ 0.48
CBWD1-225ENST00000616944 USP17L21D6R901 530 aa18.03■□□□□ 0.48
CBWD1-225ENST00000616944 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.48
CBWD1-225ENST00000616944 PPARAQ07869 468 aa18.03■□□□□ 0.48
CBWD1-225ENST00000616944 UPF3BQ9BZI7 483 aaKnown RBP18.03■□□□□ 0.48
CBWD1-225ENST00000616944 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
CBWD1-225ENST00000616944 TACC3Q9Y6A5 838 aa18.03■□□□□ 0.48
CBWD1-225ENST00000616944 GJA3Q9Y6H8 435 aa18.03■□□□□ 0.48
CBWD1-225ENST00000616944 ROBO3Q96MS0 1386 aa18.03■□□□□ 0.48
CBWD1-225ENST00000616944 SMIM22K7EJ46 135 aa18.02■□□□□ 0.48
CBWD1-225ENST00000616944 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
CBWD1-225ENST00000616944 CASTP20810 708 aaKnown RBP18.02■□□□□ 0.48
CBWD1-225ENST00000616944 MAPKAPK5Q8IW41 473 aa18.02■□□□□ 0.48
CBWD1-225ENST00000616944 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
CBWD1-225ENST00000616944 DDRGK1Q96HY6 314 aa18.02■□□□□ 0.48
CBWD1-225ENST00000616944 IDI2Q9BXS1 227 aa18.02■□□□□ 0.48
CBWD1-225ENST00000616944 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
CBWD1-225ENST00000616944 CYP2D7A0A087X1C5 515 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 CD2BP2O95400 341 aaKnown RBP18.01■□□□□ 0.47
CBWD1-225ENST00000616944 PSMA5P28066 241 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 EVX2Q03828 476 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 NFIAQ12857 509 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 DLGAP5Q15398 846 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 TTC14Q96N46 770 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 MYOZ2Q9NPC6 264 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 MCM9Q9NXL9 1143 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 COL2A1P02458 1487 aaPredicted RBP18.01■□□□□ 0.47
CBWD1-225ENST00000616944 FGRP09769 529 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 NEK4P51957 841 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 CTDSPL2Q05D32 466 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 C12orf60Q5U649 245 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 MICALL2Q8IY33 904 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 SNX21Q969T3 373 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 TDRD3Q9H7E2 651 aaKnown RBP18.01■□□□□ 0.47
CBWD1-225ENST00000616944 FAM198AQ9UFP1 575 aa18.01■□□□□ 0.47
CBWD1-225ENST00000616944 CNOT7Q9UIV1 285 aaKnown RBP18.01■□□□□ 0.47
CBWD1-225ENST00000616944 SCN4AP35499 1836 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 NEDD4P46934 1319 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 WNT10BO00744 389 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 EGFRP00533 1210 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 CYP2D6P10635 497 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 CPA1P15085 419 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 AKNAD1Q5T1N1 836 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 GPRC5DQ9NZD1 345 aa18■□□□□ 0.47
CBWD1-225ENST00000616944 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
CBWD1-225ENST00000616944 CACNB3P54284 484 aa17.99■□□□□ 0.47
CBWD1-225ENST00000616944 MB21D2Q8IYB1 491 aaPredicted RBP17.99■□□□□ 0.47
CBWD1-225ENST00000616944 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
CBWD1-225ENST00000616944 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
CBWD1-225ENST00000616944 CYP46A1Q9Y6A2 500 aa17.99■□□□□ 0.47
CBWD1-225ENST00000616944 POLR2AP24928 1970 aaKnown RBP17.99■□□□□ 0.47
CBWD1-225ENST00000616944 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
CBWD1-225ENST00000616944 RPS6KB1P23443 525 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 PICALMQ13492 652 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
CBWD1-225ENST00000616944 ATRNL1Q5VV63 1379 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 ST18O60284 1047 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 DDNO94850 711 aaPredicted RBP17.98■□□□□ 0.47
CBWD1-225ENST00000616944 PCP11498 1178 aaKnown RBP17.98■□□□□ 0.47
CBWD1-225ENST00000616944 PLCD1P51178 756 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 NBPF9Q3BBW0 867 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 FKBP1CQ5VVH2 108 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 NCOA7Q8NI08 942 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
CBWD1-225ENST00000616944 ZNF70Q9UC06 446 aaPredicted RBP17.98■□□□□ 0.47
CBWD1-225ENST00000616944 SAP30BPQ9UHR5 308 aaKnown RBP17.98■□□□□ 0.47
CBWD1-225ENST00000616944 WDR90Q96KV7 1748 aa17.97■□□□□ 0.47
CBWD1-225ENST00000616944 GREB1LQ9C091 1923 aaPredicted RBP17.97■□□□□ 0.47
CBWD1-225ENST00000616944 ENTPD3O75355 529 aa17.97■□□□□ 0.47
CBWD1-225ENST00000616944 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
CBWD1-225ENST00000616944 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
CBWD1-225ENST00000616944 SAMD7Q7Z3H4 446 aa17.97■□□□□ 0.47
CBWD1-225ENST00000616944 ZFPM1Q8IX07 1006 aa17.97■□□□□ 0.47
CBWD1-225ENST00000616944 ALDH8A1Q9H2A2 487 aaPredicted RBP17.97■□□□□ 0.47
CBWD1-225ENST00000616944 RNF41Q9H4P4 317 aaPredicted RBP17.97■□□□□ 0.47
CBWD1-225ENST00000616944 CNNM2Q9H8M5 875 aa17.97■□□□□ 0.47
CBWD1-225ENST00000616944 CNTNAP1P78357 1384 aa17.96■□□□□ 0.47
CBWD1-225ENST00000616944 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
CBWD1-225ENST00000616944 AMOTL1Q8IY63 956 aa17.96■□□□□ 0.47
CBWD1-225ENST00000616944 L3MBTL3Q96JM7 780 aaPredicted RBP17.96■□□□□ 0.47
CBWD1-225ENST00000616944 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 CLRN2A0PK11 232 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 B4E1Z4 1266 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 ORC4O43929 436 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 POLR3DP05423 398 aaPredicted RBP17.95■□□□□ 0.46
CBWD1-225ENST00000616944 ANTXR2P58335 489 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 KIF4BQ2VIQ3 1234 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 SLC4A8Q2Y0W8 1093 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 SH3BP5LQ7L8J4 393 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 FBXL16Q8N461 479 aa17.95■□□□□ 0.46
CBWD1-225ENST00000616944 TCEANC2Q96MN5 208 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms