RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 TEPSINQ96N21 525 aa15.95■□□□□ 0.14
MDC1-209ENST00000613547 CSRNP1Q96S65 589 aa15.95■□□□□ 0.14
MDC1-209ENST00000613547 OSBPL5Q9H0X9 879 aaPredicted RBP15.95■□□□□ 0.14
MDC1-209ENST00000613547 DHX36Q9H2U1 1008 aaKnown RBP15.95■□□□□ 0.14
MDC1-209ENST00000613547 DDX4Q9NQI0 724 aaKnown RBP15.95■□□□□ 0.14
MDC1-209ENST00000613547 FLT1P17948 1338 aa15.94■□□□□ 0.14
MDC1-209ENST00000613547 SLFNL1Q499Z3 407 aa15.94■□□□□ 0.14
MDC1-209ENST00000613547 ZMYM1Q5SVZ6 1142 aa15.94■□□□□ 0.14
MDC1-209ENST00000613547 OSBP2Q969R2 916 aa15.94■□□□□ 0.14
MDC1-209ENST00000613547 PUS7LQ9H0K6 701 aaKnown RBP15.94■□□□□ 0.14
MDC1-209ENST00000613547 DIAPH3Q9NSV4 1193 aa15.94■□□□□ 0.14
MDC1-209ENST00000613547 COL2A1P02458 1487 aaPredicted RBP15.94■□□□□ 0.14
MDC1-209ENST00000613547 ATRNL1Q5VV63 1379 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 CHGBP05060 677 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 HLA-DOAP06340 250 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 GSPT1P15170 499 aaKnown RBP15.93■□□□□ 0.14
MDC1-209ENST00000613547 GNAT2P19087 354 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 SDSP20132 328 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 IREB2P48200 963 aaKnown RBP15.93■□□□□ 0.14
MDC1-209ENST00000613547 HUNKP57058 714 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 PRKG1Q13976 671 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 AMOTL1Q8IY63 956 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 HELLSQ9NRZ9 838 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 TLL2Q9Y6L7 1015 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 SLC4A4Q9Y6R1 1079 aa15.93■□□□□ 0.14
MDC1-209ENST00000613547 GPAA1O43292 621 aa15.92■□□□□ 0.14
MDC1-209ENST00000613547 SAPCD2Q86UD0 394 aa15.92■□□□□ 0.14
MDC1-209ENST00000613547 CDAN1Q8IWY9 1227 aa15.92■□□□□ 0.14
MDC1-209ENST00000613547 ZFPM1Q8IX07 1006 aa15.92■□□□□ 0.14
MDC1-209ENST00000613547 TRIM34Q9BYJ4 488 aa15.92■□□□□ 0.14
MDC1-209ENST00000613547 ATP8A2Q9NTI2 1148 aa15.92■□□□□ 0.14
MDC1-209ENST00000613547 ANGEL1Q9UNK9 670 aaKnown RBP15.92■□□□□ 0.14
MDC1-209ENST00000613547 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
MDC1-209ENST00000613547 MFAP1P55081 439 aaKnown RBP15.91■□□□□ 0.14
MDC1-209ENST00000613547 TTC6Q86TZ1 520 aa15.91■□□□□ 0.14
MDC1-209ENST00000613547 SDR42E1Q8WUS8 393 aa15.91■□□□□ 0.14
MDC1-209ENST00000613547 HHIPL1Q96JK4 782 aa15.91■□□□□ 0.14
MDC1-209ENST00000613547 STRBPQ96SI9 672 aaKnown RBP15.91■□□□□ 0.14
MDC1-209ENST00000613547 ZNF341Q9BYN7 854 aa15.91■□□□□ 0.14
MDC1-209ENST00000613547 MCM9Q9NXL9 1143 aa15.91■□□□□ 0.14
MDC1-209ENST00000613547 PI4KBQ9UBF8 816 aa15.91■□□□□ 0.14
MDC1-209ENST00000613547 SAP30BPQ9UHR5 308 aaKnown RBP15.91■□□□□ 0.14
MDC1-209ENST00000613547 SSC5DA1L4H1 1573 aa15.91■□□□□ 0.14
MDC1-209ENST00000613547 MYO5AQ9Y4I1 1855 aaKnown RBP15.91■□□□□ 0.14
MDC1-209ENST00000613547 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 M0R2C6 588 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 APPP05067 770 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 NMIQ13287 307 aaPredicted RBP15.9■□□□□ 0.14
MDC1-209ENST00000613547 MAP3K11Q16584 847 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 MCMDC2Q4G0Z9 681 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 BMP2KLQ5H9B9 411 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 PAXIP1Q6ZW49 1069 aaPredicted RBP15.9■□□□□ 0.14
MDC1-209ENST00000613547 SH3BP5LQ7L8J4 393 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 CRACR2BQ8N4Y2 399 aaPredicted RBP15.9■□□□□ 0.14
MDC1-209ENST00000613547 NACAP1Q9BZK3 213 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 DCP1AQ9NPI6 582 aaPredicted RBP15.9■□□□□ 0.14
MDC1-209ENST00000613547 HERC5Q9UII4 1024 aaKnown RBP15.9■□□□□ 0.14
MDC1-209ENST00000613547 PALD1Q9ULE6 856 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 PAPPA2Q9BXP8 1791 aa15.9■□□□□ 0.14
MDC1-209ENST00000613547 RASSF10A6NK89 507 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 PRKAB2O43741 272 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 USP2O75604 605 aaPredicted RBP15.89■□□□□ 0.13
MDC1-209ENST00000613547 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
MDC1-209ENST00000613547 DEFB115Q30KQ5 88 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 GIMAP6Q6P9H5 292 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 MIGA2Q7L4E1 593 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 FOXP4Q8IVH2 680 aaPredicted RBP15.89■□□□□ 0.13
MDC1-209ENST00000613547 ANKRD13AQ8IZ07 590 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 RUFY2Q8WXA3 655 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 FAM227BQ96M60 508 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 SEC62Q99442 399 aaKnown RBP15.89■□□□□ 0.13
MDC1-209ENST00000613547 CSADQ9Y600 493 aa15.89■□□□□ 0.13
MDC1-209ENST00000613547 A0A0D9SFI3 127 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 TBC1D12O60347 775 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 ECE1P42892 770 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 HTRA3P83110 453 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 CWC27Q6UX04 472 aaKnown RBP15.88■□□□□ 0.13
MDC1-209ENST00000613547 MOB2Q70IA6 237 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 SKAP1Q86WV1 359 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 WRNIP1Q96S55 665 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
MDC1-209ENST00000613547 ARPP21Q9UBL0 812 aaPredicted RBP15.88■□□□□ 0.13
MDC1-209ENST00000613547 MKRN1Q9UHC7 482 aaKnown RBP15.88■□□□□ 0.13
MDC1-209ENST00000613547 TRPM7Q96QT4 1865 aa15.88■□□□□ 0.13
MDC1-209ENST00000613547 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
MDC1-209ENST00000613547 TDO2P48775 406 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 ZNF157P51786 506 aaPredicted RBP15.87■□□□□ 0.13
MDC1-209ENST00000613547 MAP3K9P80192 1104 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 LDLRAD1Q5T700 205 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 RGMBQ6NW40 437 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 CCDC102AQ96A19 550 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 KLRG1Q96E93 195 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 EHD4Q9H223 541 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 SERPINB13Q9UIV8 391 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 TAOK2Q9UL54 1235 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 FZD1Q9UP38 647 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 CCDC171Q6TFL3 1326 aa15.87■□□□□ 0.13
MDC1-209ENST00000613547 MYH7P12883 1935 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms