RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CDC42EP5Q6NZY7 148 aa24.02■■□□□ 1.44
CPNE9-205ENST00000613455 ARPP21Q9UBL0 812 aaPredicted RBP24.02■■□□□ 1.44
CPNE9-205ENST00000613455 FLT1P17948 1338 aa24.02■■□□□ 1.44
CPNE9-205ENST00000613455 NEDD4P46934 1319 aa24.02■■□□□ 1.44
CPNE9-205ENST00000613455 MYH1P12882 1939 aa24.02■■□□□ 1.44
CPNE9-205ENST00000613455 MINDY4BA8MYZ0 360 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 EVX2Q03828 476 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 SBK1Q52WX2 424 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 MAPKAPK5Q8IW41 473 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 STAG1Q8WVM7 1258 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 TCEANC2Q96MN5 208 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 WDHD1O75717 1129 aaPredicted RBP24.01■■□□□ 1.43
CPNE9-205ENST00000613455 HMGB1P09429 215 aaKnown RBP24.01■■□□□ 1.43
CPNE9-205ENST00000613455 USP17L8P0C7I0 530 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 AK2P54819 239 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 TNIP1Q15025 636 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 CFAP100Q494V2 611 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 AKNAD1Q5T1N1 836 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 MB21D2Q8IYB1 491 aaPredicted RBP24.01■■□□□ 1.43
CPNE9-205ENST00000613455 NKX2-3Q8TAU0 364 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 INCENPQ9NQS7 918 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 USP40Q9NVE5 1235 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 MCM9Q9NXL9 1143 aa24.01■■□□□ 1.43
CPNE9-205ENST00000613455 CYP2D6P10635 497 aa24■■□□□ 1.43
CPNE9-205ENST00000613455 RBM5P52756 815 aaKnown RBP eCLIP24■■□□□ 1.43
CPNE9-205ENST00000613455 DHX32Q7L7V1 743 aaKnown RBP24■■□□□ 1.43
CPNE9-205ENST00000613455 ZNF541Q9H0D2 1346 aa24■■□□□ 1.43
CPNE9-205ENST00000613455 MCM2P49736 904 aa23.99■■□□□ 1.43
CPNE9-205ENST00000613455 EIF6P56537 245 aaKnown RBP23.99■■□□□ 1.43
CPNE9-205ENST00000613455 NCOA7Q8NI08 942 aa23.99■■□□□ 1.43
CPNE9-205ENST00000613455 ALDH8A1Q9H2A2 487 aaPredicted RBP23.99■■□□□ 1.43
CPNE9-205ENST00000613455 EXOSC10Q01780 885 aaKnown RBP23.98■■□□□ 1.43
CPNE9-205ENST00000613455 DDX4Q9NQI0 724 aaKnown RBP23.98■■□□□ 1.43
CPNE9-205ENST00000613455 HDAC9Q9UKV0 1011 aa23.98■■□□□ 1.43
CPNE9-205ENST00000613455 C12orf60Q5U649 245 aa23.98■■□□□ 1.43
CPNE9-205ENST00000613455 NOL8Q76FK4 1167 aaKnown RBP23.98■■□□□ 1.43
CPNE9-205ENST00000613455 RALYLQ86SE5 291 aaKnown RBP23.98■■□□□ 1.43
CPNE9-205ENST00000613455 OGFOD1Q8N543 542 aa23.98■■□□□ 1.43
CPNE9-205ENST00000613455 DAXXQ9UER7 740 aaPredicted RBP23.98■■□□□ 1.43
CPNE9-205ENST00000613455 ROBO3Q96MS0 1386 aa23.97■■□□□ 1.43
CPNE9-205ENST00000613455 ANTXR2P58335 489 aa23.97■■□□□ 1.43
CPNE9-205ENST00000613455 TOB2Q14106 344 aaPredicted RBP23.97■■□□□ 1.43
CPNE9-205ENST00000613455 MFSD6Q6ZSS7 791 aa23.97■■□□□ 1.43
CPNE9-205ENST00000613455 PRMT6Q96LA8 375 aaPredicted RBP23.97■■□□□ 1.43
CPNE9-205ENST00000613455 SAP30BPQ9UHR5 308 aaKnown RBP23.97■■□□□ 1.43
CPNE9-205ENST00000613455 SPDYE2BA6NHP3 402 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 B4E1Z4 1266 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 SPDYE6P0CI01 402 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 RPS12P25398 132 aaKnown RBP23.96■■□□□ 1.43
CPNE9-205ENST00000613455 TRDNQ13061 729 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 SLC4A8Q2Y0W8 1093 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 STK11IPQ8N1F8 1099 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 LRRC2Q9BYS8 371 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 RNF41Q9H4P4 317 aaPredicted RBP23.96■■□□□ 1.43
CPNE9-205ENST00000613455 SHTN1A0MZ66 631 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 FGRP09769 529 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 NFIAQ12857 509 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 PICALMQ13492 652 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 CHST3Q7LGC8 479 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 LARP6Q9BRS8 491 aaKnown RBP23.96■■□□□ 1.43
CPNE9-205ENST00000613455 CNNM2Q9H8M5 875 aa23.96■■□□□ 1.43
CPNE9-205ENST00000613455 MCM5P33992 734 aa23.95■■□□□ 1.42
CPNE9-205ENST00000613455 Q6ZUG5 572 aa23.95■■□□□ 1.42
CPNE9-205ENST00000613455 MTMR14Q8NCE2 650 aa23.95■■□□□ 1.42
CPNE9-205ENST00000613455 TMX3Q96JJ7 454 aa23.95■■□□□ 1.42
CPNE9-205ENST00000613455 AGXT2Q9BYV1 514 aa23.95■■□□□ 1.42
CPNE9-205ENST00000613455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.95■■□□□ 1.42
CPNE9-205ENST00000613455 GMPSP49915 693 aaPredicted RBP23.94■■□□□ 1.42
CPNE9-205ENST00000613455 PLCD1P51178 756 aa23.94■■□□□ 1.42
CPNE9-205ENST00000613455 CACNB3P54284 484 aa23.94■■□□□ 1.42
CPNE9-205ENST00000613455 ZNF280AP59817 542 aaPredicted RBP23.94■■□□□ 1.42
CPNE9-205ENST00000613455 CYB5R4Q7L1T6 521 aa23.94■■□□□ 1.42
CPNE9-205ENST00000613455 IDI2Q9BXS1 227 aa23.94■■□□□ 1.42
CPNE9-205ENST00000613455 TDRD3Q9H7E2 651 aaKnown RBP23.94■■□□□ 1.42
CPNE9-205ENST00000613455 LIMCH1Q9UPQ0 1083 aa23.94■■□□□ 1.42
CPNE9-205ENST00000613455 GJA3Q9Y6H8 435 aa23.94■■□□□ 1.42
CPNE9-205ENST00000613455 WDR19Q8NEZ3 1342 aa23.94■■□□□ 1.42
CPNE9-205ENST00000613455 PRC1O43663 620 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 PCP11498 1178 aaKnown RBP23.93■■□□□ 1.42
CPNE9-205ENST00000613455 DLGAP5Q15398 846 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 ZBED3Q96IU2 234 aaPredicted RBP23.93■■□□□ 1.42
CPNE9-205ENST00000613455 KRT23Q9C075 422 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 OSBPL5Q9H0X9 879 aaPredicted RBP23.93■■□□□ 1.42
CPNE9-205ENST00000613455 POLR3DP05423 398 aaPredicted RBP23.93■■□□□ 1.42
CPNE9-205ENST00000613455 ANKRD1Q15327 319 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 AMOTL1Q8IY63 956 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 FBXL16Q8N461 479 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 DPF2Q92785 391 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 RNF181Q9P0P0 153 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 FAM198AQ9UFP1 575 aa23.93■■□□□ 1.42
CPNE9-205ENST00000613455 KDM4AO75164 1064 aa23.92■■□□□ 1.42
CPNE9-205ENST00000613455 RRP12Q5JTH9 1297 aaKnown RBP23.92■■□□□ 1.42
CPNE9-205ENST00000613455 ZSWIM5Q9P217 1185 aa23.92■■□□□ 1.42
CPNE9-205ENST00000613455 TPCN1Q9ULQ1 816 aa23.92■■□□□ 1.42
CPNE9-205ENST00000613455 SIPA1L1O43166 1804 aa23.91■■□□□ 1.42
CPNE9-205ENST00000613455 ORC4O43929 436 aa23.91■■□□□ 1.42
CPNE9-205ENST00000613455 NPM3O75607 178 aaKnown RBP23.91■■□□□ 1.42
CPNE9-205ENST00000613455 PRDM1O75626 825 aa23.91■■□□□ 1.42
CPNE9-205ENST00000613455 LARGE1O95461 756 aa23.91■■□□□ 1.42
CPNE9-205ENST00000613455 SLC3A2P08195 630 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms