RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
ATF3-210ENST00000613104 STRBPQ96SI9 672 aaKnown RBP11.18□□□□□ -0.62
ATF3-210ENST00000613104 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
ATF3-210ENST00000613104 ARMT1Q9H993 441 aa11.18□□□□□ -0.62
ATF3-210ENST00000613104 KIF3CO14782 793 aa11.17□□□□□ -0.62
ATF3-210ENST00000613104 SGSM2O43147 1006 aa11.17□□□□□ -0.62
ATF3-210ENST00000613104 WDHD1O75717 1129 aaPredicted RBP11.17□□□□□ -0.62
ATF3-210ENST00000613104 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
ATF3-210ENST00000613104 APLP1P51693 650 aa11.17□□□□□ -0.62
ATF3-210ENST00000613104 CCDC129Q6ZRS4 1044 aa11.17□□□□□ -0.62
ATF3-210ENST00000613104 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
ATF3-210ENST00000613104 IL25Q9H293 177 aa11.17□□□□□ -0.62
ATF3-210ENST00000613104 DDX60LQ5H9U9 1706 aaKnown RBP11.17□□□□□ -0.62
ATF3-210ENST00000613104 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
ATF3-210ENST00000613104 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 UTRNP46939 3433 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 POTEJP0CG39 1038 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 GNAT2P19087 354 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 NFIAQ12857 509 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
ATF3-210ENST00000613104 ANGEL2Q5VTE6 544 aaKnown RBP11.16□□□□□ -0.62
ATF3-210ENST00000613104 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 LDHDQ86WU2 507 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
ATF3-210ENST00000613104 TEX11Q8IYF3 940 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 ESYT1Q9BSJ8 1104 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 CRNKL1Q9BZJ0 848 aaKnown RBP11.16□□□□□ -0.62
ATF3-210ENST00000613104 DDX4Q9NQI0 724 aaKnown RBP11.16□□□□□ -0.62
ATF3-210ENST00000613104 GGA3Q9NZ52 723 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 TMOD2Q9NZR1 351 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 MKRN1Q9UHC7 482 aaKnown RBP11.16□□□□□ -0.62
ATF3-210ENST00000613104 NAV1Q8NEY1 1877 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
ATF3-210ENST00000613104 MYH1P12882 1939 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 COL2A1P02458 1487 aaPredicted RBP11.15□□□□□ -0.62
ATF3-210ENST00000613104 PATL2C9JE40 543 aaKnown RBP11.15□□□□□ -0.62
ATF3-210ENST00000613104 FOXP2O15409 715 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 PRKAB2O43741 272 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 ENTPD3O75355 529 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
ATF3-210ENST00000613104 CACNB3P54284 484 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
ATF3-210ENST00000613104 TNFAIP1Q13829 316 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
ATF3-210ENST00000613104 DCPSQ96C86 337 aaKnown RBP11.15□□□□□ -0.62
ATF3-210ENST00000613104 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
ATF3-210ENST00000613104 VEZTQ9HBM0 779 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 ATP8A2Q9NTI2 1148 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
ATF3-210ENST00000613104 FLT1P17948 1338 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 BAZ2AQ9UIF9 1905 aaKnown RBP11.14□□□□□ -0.63
ATF3-210ENST00000613104 GSG1L2A8MUP6 293 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 HSPD1P10809 573 aaKnown RBP11.14□□□□□ -0.63
ATF3-210ENST00000613104 PYGBP11216 843 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 USP5P45974 858 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 TNNI2P48788 182 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 SDR42E1Q8WUS8 393 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 FAM151AQ8WW52 585 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 OSBPL5Q9H0X9 879 aaPredicted RBP11.14□□□□□ -0.63
ATF3-210ENST00000613104 EPB41L4AQ9HCS5 686 aaPredicted RBP11.14□□□□□ -0.63
ATF3-210ENST00000613104 DCP1AQ9NPI6 582 aaPredicted RBP11.14□□□□□ -0.63
ATF3-210ENST00000613104 PPP2R3BQ9Y5P8 575 aa11.14□□□□□ -0.63
ATF3-210ENST00000613104 PICALMQ13492 652 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 RASA3Q14644 834 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 ALX1Q15699 326 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 VPS53Q5VIR6 699 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 MAPKAPK5Q8IW41 473 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 ZFPM1Q8IX07 1006 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 IFNL3Q8IZI9 196 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 DSCC1Q9BVC3 393 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 DEFB129Q9H1M3 183 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 SCAF8Q9UPN6 1271 aaKnown RBP11.13□□□□□ -0.63
ATF3-210ENST00000613104 SIPA1L1O43166 1804 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 ATRNL1Q5VV63 1379 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 LAMB1P07942 1786 aa11.13□□□□□ -0.63
ATF3-210ENST00000613104 ZMYM6O95789 1325 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 TCP10Q12799 353 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 C8orf34Q49A92 452 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 SBK1Q52WX2 424 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
ATF3-210ENST00000613104 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 SH3BP5LQ7L8J4 393 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 KRT26Q7Z3Y9 468 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 TEPSINQ96N21 525 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 TMEM39BQ9GZU3 492 aa11.12□□□□□ -0.63
ATF3-210ENST00000613104 LSG1Q9H089 658 aaKnown RBP11.12□□□□□ -0.63
ATF3-210ENST00000613104 DDTLA6NHG4 134 aaPredicted RBP11.11□□□□□ -0.63
ATF3-210ENST00000613104 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
ATF3-210ENST00000613104 APPP05067 770 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms