RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ATP2A1O14983 1001 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KRT10P13645 584 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ABTB2Q8N961 1025 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PER1O15534 1290 aaPredicted RBP12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 LMNAP02545 664 aaKnown RBP12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 FAM204AQ9H8W3 233 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MAGED2Q9UNF1 606 aaPredicted RBP12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MTUS1Q9ULD2 1270 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PTGS1P23219 599 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KCNA1Q09470 495 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RILPQ96NA2 401 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 EIF4E1BA6NMX2 242 aaKnown RBP12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MX1P20591 662 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 C1orf228Q6PIY5 440 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KRT82Q9NSB4 513 aa12.06□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ALDH3A1P30838 453 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ABTB1Q969K4 478 aaPredicted RBP12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CCDC138Q96M89 665 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PDRG1Q9NUG6 133 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 VCPP55072 806 aaKnown RBP12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 FAPQ12884 760 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PKD2L1Q9P0L9 805 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 NDUFB5O43674 189 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MPRIPQ6WCQ1 1025 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 AACSQ86V21 672 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TSC1Q92574 1164 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PGBD1Q96JS3 809 aa12.05□□□□□ -0.48
CNTNAP3B-211ENST00000612828 HMGB1P1B2RPK0 211 aaPredicted RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ATP11AP98196 1134 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RALGDSQ12967 914 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MCM8Q9UJA3 840 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ARF4P18085 180 aaPredicted RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MCM3P25205 808 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 EXOC8Q8IYI6 725 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 VPS37AQ8NEZ2 397 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 BNIP3LO60238 219 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CLUL1Q15846 466 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 C11orf88Q6PI97 169 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SCYL1Q96KG9 808 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 DMAP1Q9NPF5 467 aaPredicted RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 GNGT2O14610 69 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TAGAPQ8N103 731 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ZNF830Q96NB3 372 aaPredicted RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RRAGDQ9NQL2 400 aaPredicted RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 IGHMBP2P38935 993 aaKnown RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 HAUS8Q9BT25 410 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RASAL2Q9UJF2 1139 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PLEKHH2Q8IVE3 1493 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 TCF3P15923 654 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KRT85P78386 507 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 BMP2KLQ5H9B9 411 aa12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 INTS8Q75QN2 995 aaKnown RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MTERF4Q7Z6M4 381 aaKnown RBP12.04□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ARL3P36405 182 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CCDC94Q9BW85 323 aaPredicted RBP12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SLC12A2P55011 1212 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SNW1Q13573 536 aaKnown RBP12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ANO4Q32M45 955 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CALML4Q96GE6 196 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ZNF287Q9HBT7 754 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MBIPQ9NS73 344 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RSPH14Q9UHP6 348 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SH3BP5LQ7L8J4 393 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MCM7P33993 719 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CBFBQ13951 182 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RAB34Q9BZG1 259 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CHMP1BQ7LBR1 199 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 RPS6KC1Q96S38 1066 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KIAA0586Q9BVV6 1533 aa12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 CAPRIN2Q6IMN6 1127 aaKnown RBP12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 STXBP4Q6ZWJ1 553 aa12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PLVAPQ9BX97 442 aa12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 KRT17Q04695 432 aa12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 EHHADHQ08426 723 aa12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PPP2R5EQ16537 467 aa12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.48
CNTNAP3B-211ENST00000612828 PDCP20941 246 aa12.02□□□□□ -0.49
CNTNAP3B-211ENST00000612828 ZHX1Q9UKY1 873 aaPredicted RBP12.02□□□□□ -0.49
CNTNAP3B-211ENST00000612828 CLCA2Q9UQC9 943 aa12.02□□□□□ -0.49
CNTNAP3B-211ENST00000612828 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.49
CNTNAP3B-211ENST00000612828 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
CNTNAP3B-211ENST00000612828 HSP90AA4PQ58FG1 418 aa12.02□□□□□ -0.49
CNTNAP3B-211ENST00000612828 TJAP1Q5JTD0 557 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms