RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 MRS2Q9HD23 443 aa21.54■■□□□ 1.04
CSNK1E-215ENST00000612795 USP40Q9NVE5 1235 aa21.54■■□□□ 1.04
CSNK1E-215ENST00000612795 FAM198AQ9UFP1 575 aa21.54■■□□□ 1.04
CSNK1E-215ENST00000612795 CAPN2P17655 700 aa21.53■■□□□ 1.04
CSNK1E-215ENST00000612795 PRDX5P30044 214 aa21.53■■□□□ 1.04
CSNK1E-215ENST00000612795 PXYLP1Q8TE99 480 aa21.53■■□□□ 1.04
CSNK1E-215ENST00000612795 LPIN2Q92539 896 aa21.53■■□□□ 1.04
CSNK1E-215ENST00000612795 LRCH3Q96II8 777 aa21.53■■□□□ 1.04
CSNK1E-215ENST00000612795 ATAD5Q96QE3 1844 aa21.52■■□□□ 1.04
CSNK1E-215ENST00000612795 LDHBP07195 334 aaKnown RBP21.52■■□□□ 1.04
CSNK1E-215ENST00000612795 IRF5Q13568 498 aa21.52■■□□□ 1.04
CSNK1E-215ENST00000612795 STAP2Q9UGK3 403 aa21.52■■□□□ 1.04
CSNK1E-215ENST00000612795 LAMA3Q16787 3333 aa21.52■■□□□ 1.04
CSNK1E-215ENST00000612795 PTPRAP18433 802 aa21.51■■□□□ 1.03
CSNK1E-215ENST00000612795 ZSCAN29Q8IWY8 852 aaPredicted RBP21.51■■□□□ 1.03
CSNK1E-215ENST00000612795 SLC45A1Q9Y2W3 748 aa21.51■■□□□ 1.03
CSNK1E-215ENST00000612795 LRRFIP2Q9Y608 721 aaKnown RBP21.51■■□□□ 1.03
CSNK1E-215ENST00000612795 DDX60LQ5H9U9 1706 aaKnown RBP21.51■■□□□ 1.03
CSNK1E-215ENST00000612795 COL6A3P12111 3177 aa21.51■■□□□ 1.03
CSNK1E-215ENST00000612795 ATRNL1Q5VV63 1379 aa21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 EYA2O00167 538 aa21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 RGS3P49796 1198 aa21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 ZFPM1Q8IX07 1006 aa21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 COA7Q96BR5 231 aa21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 PAWRQ96IZ0 340 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 PAK6Q9NQU5 681 aaPredicted RBP21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 GNL3LQ9NVN8 582 aaKnown RBP21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 LOC285556D6RIA3 1793 aa21.5■■□□□ 1.03
CSNK1E-215ENST00000612795 NECAB2Q7Z6G3 386 aa21.49■■□□□ 1.03
CSNK1E-215ENST00000612795 AFG3L2Q9Y4W6 797 aa21.49■■□□□ 1.03
CSNK1E-215ENST00000612795 TRIM75PA6NK02 468 aa21.48■■□□□ 1.03
CSNK1E-215ENST00000612795 PHF20L1A8MW92 1017 aa21.48■■□□□ 1.03
CSNK1E-215ENST00000612795 ENTPD3O75355 529 aa21.47■■□□□ 1.03
CSNK1E-215ENST00000612795 C7orf61Q8IZ16 206 aa21.47■■□□□ 1.03
CSNK1E-215ENST00000612795 ANKRD13CQ8N6S4 541 aa21.47■■□□□ 1.03
CSNK1E-215ENST00000612795 CRISPLD2Q9H0B8 497 aa21.47■■□□□ 1.03
CSNK1E-215ENST00000612795 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.47■■□□□ 1.03
CSNK1E-215ENST00000612795 PNMA3Q9UL41 463 aa21.47■■□□□ 1.03
CSNK1E-215ENST00000612795 SALL1Q9NSC2 1324 aa21.47■■□□□ 1.03
CSNK1E-215ENST00000612795 ATP2B3Q16720 1220 aa21.46■■□□□ 1.03
CSNK1E-215ENST00000612795 DIS3LQ8TF46 1054 aaKnown RBP21.46■■□□□ 1.03
CSNK1E-215ENST00000612795 IDI2Q9BXS1 227 aa21.46■■□□□ 1.03
CSNK1E-215ENST00000612795 DENND2AQ9ULE3 1009 aa21.46■■□□□ 1.03
CSNK1E-215ENST00000612795 AGTPBP1Q9UPW5 1226 aa21.46■■□□□ 1.03
CSNK1E-215ENST00000612795 PTPRCP08575 1304 aa21.46■■□□□ 1.03
CSNK1E-215ENST00000612795 RFX7Q2KHR2 1363 aa21.46■■□□□ 1.03
CSNK1E-215ENST00000612795 CTNND1O60716 968 aaKnown RBP21.45■■□□□ 1.02
CSNK1E-215ENST00000612795 FAM110CQ1W6H9 321 aa21.45■■□□□ 1.02
CSNK1E-215ENST00000612795 ZGPATQ8N5A5 531 aaKnown RBP21.45■■□□□ 1.02
CSNK1E-215ENST00000612795 RFX5P48382 616 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 MNX1P50219 401 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 PICALMQ13492 652 aa21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 ANKLE1Q8NAG6 615 aa21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 USP44Q9H0E7 712 aa21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 SIL1Q9H173 461 aa21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 ZMYND8Q9ULU4 1186 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-215ENST00000612795 SEMA3EO15041 775 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 HMGCRP04035 888 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 SH3BP5LQ7L8J4 393 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 ATG9AQ7Z3C6 839 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 CCDC84Q86UT8 332 aaPredicted RBP21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 MRPL50Q8N5N7 158 aaKnown RBP21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 GDF15Q99988 308 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 CEP126Q9P2H0 1117 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 GAKO14976 1311 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 PLXNB2O15031 1838 aa21.43■■□□□ 1.02
CSNK1E-215ENST00000612795 DDTLA6NHG4 134 aaPredicted RBP21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 BMP8BP34820 402 aa21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 PHKA1P46020 1223 aa21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 TREML2Q5T2D2 321 aa21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 GPR153Q6NV75 609 aa21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 CUL9Q8IWT3 2517 aa21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 SLF2Q8IX21 1173 aa21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 DEFB123Q8N688 67 aa21.42■■□□□ 1.02
CSNK1E-215ENST00000612795 SLURP2P0DP57 97 aa21.41■■□□□ 1.02
CSNK1E-215ENST00000612795 MAP3K10Q02779 954 aa21.41■■□□□ 1.02
CSNK1E-215ENST00000612795 NBPF3Q9H094 633 aa21.41■■□□□ 1.02
CSNK1E-215ENST00000612795 CIAO1O76071 339 aa21.4■■□□□ 1.02
CSNK1E-215ENST00000612795 BTDP43251 543 aa21.4■■□□□ 1.02
CSNK1E-215ENST00000612795 PROCA1Q8NCQ7 364 aaPredicted RBP21.4■■□□□ 1.02
CSNK1E-215ENST00000612795 HMX1Q9NP08 348 aaPredicted RBP21.4■■□□□ 1.02
CSNK1E-215ENST00000612795 DDX4Q9NQI0 724 aaKnown RBP21.4■■□□□ 1.02
CSNK1E-215ENST00000612795 ABCF2Q9UG63 623 aa21.4■■□□□ 1.02
CSNK1E-215ENST00000612795 FBXO3Q9UK99 471 aa21.4■■□□□ 1.02
CSNK1E-215ENST00000612795 RPTORQ8N122 1335 aa21.39■■□□□ 1.01
CSNK1E-215ENST00000612795 SYN1P17600 705 aa21.39■■□□□ 1.01
CSNK1E-215ENST00000612795 GCLCP48506 637 aaPredicted RBP21.39■■□□□ 1.01
CSNK1E-215ENST00000612795 PABPC4Q13310 644 aaKnown RBP eCLIP21.39■■□□□ 1.01
CSNK1E-215ENST00000612795 Q7L0L9 218 aa21.39■■□□□ 1.01
CSNK1E-215ENST00000612795 C11orf49Q9H6J7 331 aa21.39■■□□□ 1.01
CSNK1E-215ENST00000612795 MROH7-TTC4A0A0A0MT08 1334 aa21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 FRMPD3Q5JV73 1810 aa21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 FAM196BA6NMK8 535 aa21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 MAGEA10P43363 369 aaPredicted RBP21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 SPP2Q13103 211 aa21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 LRIT3Q3SXY7 679 aa21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 SPTY2D1Q68D10 685 aaPredicted RBP21.37■■□□□ 1.01
CSNK1E-215ENST00000612795 CCDC102BQ68D86 513 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms