RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZNF213O14771 459 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 PDE6AP16499 860 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 ME1P48163 572 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 GUCY1B3Q02153 619 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.33
CDH1-213ENST00000612417 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 BRAPQ7Z569 592 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 RALYLQ86SE5 291 aaKnown RBP17.08■□□□□ 0.33
CDH1-213ENST00000612417 FSIP1Q8NA03 581 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.33
CDH1-213ENST00000612417 POLR3EQ9NVU0 708 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 ZNF532Q9HCE3 1301 aa17.08■□□□□ 0.33
CDH1-213ENST00000612417 DOCK2Q92608 1830 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 CHD4Q14839 1912 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 YEATS4O95619 227 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 FMR1NBQ8N0W7 255 aaPredicted RBP17.08■□□□□ 0.32
CDH1-213ENST00000612417 MAGEB6Q8N7X4 407 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 LINC00301Q8NCQ3 95 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 MRPS27Q92552 414 aaKnown RBP17.08■□□□□ 0.32
CDH1-213ENST00000612417 MRFAP1L1Q96HT8 127 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 FAM84BQ96KN1 310 aaPredicted RBP17.08■□□□□ 0.32
CDH1-213ENST00000612417 LRP2BPQ9P2M1 347 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.32
CDH1-213ENST00000612417 ZNF804BA4D1E1 1349 aa17.07■□□□□ 0.32
CDH1-213ENST00000612417 GOLGA6L19H0YKK7 550 aa17.07■□□□□ 0.32
CDH1-213ENST00000612417 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
CDH1-213ENST00000612417 UBE3CQ15386 1083 aa17.07■□□□□ 0.32
CDH1-213ENST00000612417 KCNG4Q8TDN1 519 aa17.07■□□□□ 0.32
CDH1-213ENST00000612417 ANO10Q9NW15 660 aa17.07■□□□□ 0.32
CDH1-213ENST00000612417 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
CDH1-213ENST00000612417 ORC3Q9UBD5 711 aaPredicted RBP17.06■□□□□ 0.32
CDH1-213ENST00000612417 KLRK1P26718 216 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 CRY2Q49AN0 593 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 DRC7Q8IY82 874 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 NBPF3Q9H094 633 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 ABCF2Q9UG63 623 aa17.06■□□□□ 0.32
CDH1-213ENST00000612417 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 A0A0U1RQG5 324 aaPredicted RBP17.05■□□□□ 0.32
CDH1-213ENST00000612417 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
CDH1-213ENST00000612417 DENND2AQ9ULE3 1009 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 ZMYM6O95789 1325 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 CPLX1O14810 134 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
CDH1-213ENST00000612417 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 FBXO33Q7Z6M2 555 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
CDH1-213ENST00000612417 TCRBV5S4A2TA0A5A2 114 aa17.04■□□□□ 0.32
CDH1-213ENST00000612417 APPP05067 770 aa17.04■□□□□ 0.32
CDH1-213ENST00000612417 MMP10P09238 476 aa17.04■□□□□ 0.32
CDH1-213ENST00000612417 TRDNQ13061 729 aa17.04■□□□□ 0.32
CDH1-213ENST00000612417 SLC51AQ86UW1 340 aa17.04■□□□□ 0.32
CDH1-213ENST00000612417 DHX40Q8IX18 779 aaKnown RBP17.04■□□□□ 0.32
CDH1-213ENST00000612417 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
CDH1-213ENST00000612417 ANGEL1Q9UNK9 670 aaKnown RBP17.04■□□□□ 0.32
CDH1-213ENST00000612417 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
CDH1-213ENST00000612417 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
CDH1-213ENST00000612417 STK38Q15208 465 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 RAI14Q9P0K7 980 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 CLIC4Q9Y696 253 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 RGPD3A6NKT7 1758 aaPredicted RBP17.03■□□□□ 0.32
CDH1-213ENST00000612417 RGPD4Q7Z3J3 1758 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 NEDD4P46934 1319 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 XDHP47989 1333 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 SPTLC2O15270 562 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 NEMFO60524 1076 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 KIF23Q02241 960 aaPredicted RBP17.03■□□□□ 0.32
CDH1-213ENST00000612417 LRMPQ12912 555 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 TIAM2Q8IVF5 1701 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 NAT10Q9H0A0 1025 aaKnown RBP17.03■□□□□ 0.32
CDH1-213ENST00000612417 LEMD3Q9Y2U8 911 aa17.03■□□□□ 0.32
CDH1-213ENST00000612417 BECN2A8MW95 431 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
CDH1-213ENST00000612417 BBOX1O75936 387 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 ALX1Q15699 326 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 BPIFA3Q9BQP9 254 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 BRIP1Q9BX63 1249 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
CDH1-213ENST00000612417 SEMA3EO15041 775 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 CDKL5O76039 1030 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 NDUFA8P51970 172 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 TXNRD3Q86VQ6 643 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 CCDC144CPQ8IYA2 1237 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 CACTINQ8WUQ7 758 aaKnown RBP17.01■□□□□ 0.31
CDH1-213ENST00000612417 A0A1B0GVL5 298 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 MBD4O95243 580 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 HOXA10P31260 410 aaPredicted RBP17.01■□□□□ 0.31
CDH1-213ENST00000612417 GPSM2P81274 684 aa17.01■□□□□ 0.31
CDH1-213ENST00000612417 SF3A1Q15459 793 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms