RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
CBWD3-208ENST00000612050 IFFO2Q5TF58 517 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 TEX11Q8IYF3 940 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15□□□□□ -0.01
CBWD3-208ENST00000612050 TLR7Q9NYK1 1049 aaKnown RBP15□□□□□ -0.01
CBWD3-208ENST00000612050 DOCK2Q92608 1830 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 GTF2A2P52657 109 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 NFIAQ12857 509 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 VGLL4Q14135 290 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 MIGA2Q7L4E1 593 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 ERO1BQ86YB8 467 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 SIRT2Q8IXJ6 389 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 TRIM34Q9BYJ4 488 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 FAM198AQ9UFP1 575 aa15□□□□□ -0.01
CBWD3-208ENST00000612050 OTOFQ9HC10 1997 aa14.99□□□□□ -0.01
CBWD3-208ENST00000612050 AAMPQ13685 434 aa14.99□□□□□ -0.01
CBWD3-208ENST00000612050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.99□□□□□ -0.01
CBWD3-208ENST00000612050 OTUD5Q96G74 571 aa14.99□□□□□ -0.01
CBWD3-208ENST00000612050 PICK1Q9NRD5 415 aa14.99□□□□□ -0.01
CBWD3-208ENST00000612050 AATFQ9NY61 560 aaKnown RBP eCLIP14.99□□□□□ -0.01
CBWD3-208ENST00000612050 CYP7A1P22680 504 aa14.98□□□□□ -0.01
CBWD3-208ENST00000612050 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.98□□□□□ -0.01
CBWD3-208ENST00000612050 CDAN1Q8IWY9 1227 aa14.98□□□□□ -0.01
CBWD3-208ENST00000612050 DNAJC2Q99543 621 aaKnown RBP14.98□□□□□ -0.01
CBWD3-208ENST00000612050 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.98□□□□□ -0.01
CBWD3-208ENST00000612050 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
CBWD3-208ENST00000612050 SPDYE5A6NIY4 337 aa14.97□□□□□ -0.01
CBWD3-208ENST00000612050 PPATQ06203 517 aa14.97□□□□□ -0.01
CBWD3-208ENST00000612050 IFNL1Q8IU54 200 aa14.97□□□□□ -0.01
CBWD3-208ENST00000612050 PCNTO95613 3336 aa14.97□□□□□ -0.01
CBWD3-208ENST00000612050 HLA-DOAP06340 250 aa14.96□□□□□ -0.01
CBWD3-208ENST00000612050 CETPP11597 493 aa14.96□□□□□ -0.01
CBWD3-208ENST00000612050 USP5P45974 858 aa14.96□□□□□ -0.01
CBWD3-208ENST00000612050 RHBDL3P58872 404 aa14.96□□□□□ -0.01
CBWD3-208ENST00000612050 SNAPC2Q13487 334 aa14.96□□□□□ -0.01
CBWD3-208ENST00000612050 MAGEB6Q8N7X4 407 aa14.96□□□□□ -0.01
CBWD3-208ENST00000612050 ZKSCAN4Q969J2 545 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-208ENST00000612050 OSBPL5Q9H0X9 879 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-208ENST00000612050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.96□□□□□ -0.01
CBWD3-208ENST00000612050 PIH1D3Q9NQM4 214 aaKnown RBP14.96□□□□□ -0.01
CBWD3-208ENST00000612050 COL2A1P02458 1487 aaPredicted RBP14.96□□□□□ -0.01
CBWD3-208ENST00000612050 LAMB1P07942 1786 aa14.96□□□□□ -0.02
CBWD3-208ENST00000612050 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 GOLIM4O00461 696 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 TBC1D8O95759 1140 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 PPP4CP60510 307 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 PPIL2Q13356 520 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 CCL15Q16663 113 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 ZSCAN25Q6NSZ9 544 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 CRACR2BQ8N4Y2 399 aaPredicted RBP14.95□□□□□ -0.02
CBWD3-208ENST00000612050 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
CBWD3-208ENST00000612050 DCTPP1Q9H773 170 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 SNCAIPQ9Y6H5 919 aa14.95□□□□□ -0.02
CBWD3-208ENST00000612050 CASP8AP2Q9UKL3 1982 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 RFX7Q2KHR2 1363 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 ATRNL1Q5VV63 1379 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 ATP5JP18859 108 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 DGKZQ13574 1117 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 NOM1Q5C9Z4 860 aaKnown RBP14.94□□□□□ -0.02
CBWD3-208ENST00000612050 NOL9Q5SY16 702 aaKnown RBP14.94□□□□□ -0.02
CBWD3-208ENST00000612050 SCYL3Q8IZE3 742 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 TGFBRAP1Q8WUH2 860 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 PAG1Q9NWQ8 432 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 PI4KBQ9UBF8 816 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 HERC5Q9UII4 1024 aaKnown RBP14.94□□□□□ -0.02
CBWD3-208ENST00000612050 ZNF112Q9UJU3 913 aa14.94□□□□□ -0.02
CBWD3-208ENST00000612050 MYO5AQ9Y4I1 1855 aaKnown RBP14.94□□□□□ -0.02
CBWD3-208ENST00000612050 DDTLA6NHG4 134 aaPredicted RBP14.93□□□□□ -0.02
CBWD3-208ENST00000612050 TBC1D12O60347 775 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 CTNND1O60716 968 aaKnown RBP14.93□□□□□ -0.02
CBWD3-208ENST00000612050 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
CBWD3-208ENST00000612050 INPP5BP32019 993 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 ARHGEF6Q15052 776 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
CBWD3-208ENST00000612050 SLC9C2Q5TAH2 1124 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 ZNF384Q8TF68 577 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 DDRGK1Q96HY6 314 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 CRBNQ96SW2 442 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 CFHR5Q9BXR6 569 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 BOLA2Q9H3K6 86 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 ZFYVE28Q9HCC9 887 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 DDX4Q9NQI0 724 aaKnown RBP14.93□□□□□ -0.02
CBWD3-208ENST00000612050 ECHDC1Q9NTX5 307 aa14.93□□□□□ -0.02
CBWD3-208ENST00000612050 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 TESPA1A2RU30 521 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-208ENST00000612050 GPR25O00155 361 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 ERC2O15083 957 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 FKTNO75072 461 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 TAF1CQ15572 869 aaPredicted RBP14.92□□□□□ -0.02
CBWD3-208ENST00000612050 MAPKAPK5Q8IW41 473 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 AMOTL1Q8IY63 956 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 MIGA1Q8NAN2 632 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 TBC1D2Q9BYX2 928 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
CBWD3-208ENST00000612050 ANTXR1Q9H6X2 564 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 ZCCHC17Q9NP64 241 aaKnown RBP14.92□□□□□ -0.02
CBWD3-208ENST00000612050 NDUFB9Q9Y6M9 179 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 CAPN15O75808 1086 aa14.92□□□□□ -0.02
CBWD3-208ENST00000612050 GJA5P36382 358 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms