RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
LINC00116-203ENST00000611969 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
LINC00116-203ENST00000611969 PXYLP1Q8TE99 480 aa17.29■□□□□ 0.36
LINC00116-203ENST00000611969 FAM198AQ9UFP1 575 aa17.29■□□□□ 0.36
LINC00116-203ENST00000611969 TAOK2Q9UL54 1235 aa17.29■□□□□ 0.36
LINC00116-203ENST00000611969 SUGT1Q9Y2Z0 365 aa17.29■□□□□ 0.36
LINC00116-203ENST00000611969 CXCL11O14625 94 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 PDE8BO95263 885 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 BMP8BP34820 402 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 IRF5Q13568 498 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 GADL1Q6ZQY3 521 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 ZFPM1Q8IX07 1006 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
LINC00116-203ENST00000611969 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
LINC00116-203ENST00000611969 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.28■□□□□ 0.36
LINC00116-203ENST00000611969 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.36
LINC00116-203ENST00000611969 ALDH1L1O75891 902 aa17.27■□□□□ 0.36
LINC00116-203ENST00000611969 SLURP2P0DP57 97 aa17.27■□□□□ 0.36
LINC00116-203ENST00000611969 SYN1P17600 705 aa17.27■□□□□ 0.36
LINC00116-203ENST00000611969 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
LINC00116-203ENST00000611969 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.27■□□□□ 0.36
LINC00116-203ENST00000611969 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
LINC00116-203ENST00000611969 ZHX2Q9Y6X8 837 aa17.27■□□□□ 0.36
LINC00116-203ENST00000611969 RFX7Q2KHR2 1363 aa17.27■□□□□ 0.35
LINC00116-203ENST00000611969 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
LINC00116-203ENST00000611969 PRDX5P30044 214 aa17.26■□□□□ 0.35
LINC00116-203ENST00000611969 RABL6Q3YEC7 729 aaPredicted RBP17.26■□□□□ 0.35
LINC00116-203ENST00000611969 GPR153Q6NV75 609 aa17.26■□□□□ 0.35
LINC00116-203ENST00000611969 NECAB2Q7Z6G3 386 aa17.26■□□□□ 0.35
LINC00116-203ENST00000611969 SCYL3Q8IZE3 742 aa17.26■□□□□ 0.35
LINC00116-203ENST00000611969 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
LINC00116-203ENST00000611969 EYSQ5T1H1 3165 aa17.26■□□□□ 0.35
LINC00116-203ENST00000611969 LAMA2P24043 3122 aaKnown RBP17.26■□□□□ 0.35
LINC00116-203ENST00000611969 UTYO14607 1347 aa17.25■□□□□ 0.35
LINC00116-203ENST00000611969 PTPRAP18433 802 aa17.25■□□□□ 0.35
LINC00116-203ENST00000611969 FGFR2P21802 821 aa17.25■□□□□ 0.35
LINC00116-203ENST00000611969 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
LINC00116-203ENST00000611969 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
LINC00116-203ENST00000611969 SMCR8Q8TEV9 937 aaPredicted RBP17.25■□□□□ 0.35
LINC00116-203ENST00000611969 COL25A1Q9BXS0 654 aaPredicted RBP17.25■□□□□ 0.35
LINC00116-203ENST00000611969 MTMR10Q9NXD2 777 aa17.25■□□□□ 0.35
LINC00116-203ENST00000611969 AFG3L2Q9Y4W6 797 aa17.25■□□□□ 0.35
LINC00116-203ENST00000611969 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
LINC00116-203ENST00000611969 TRIM32Q13049 653 aa17.24■□□□□ 0.35
LINC00116-203ENST00000611969 PUM3Q15397 648 aaKnown RBP17.24■□□□□ 0.35
LINC00116-203ENST00000611969 LRIT3Q3SXY7 679 aa17.24■□□□□ 0.35
LINC00116-203ENST00000611969 FASTKD5Q7L8L6 764 aaKnown RBP17.24■□□□□ 0.35
LINC00116-203ENST00000611969 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
LINC00116-203ENST00000611969 SLC45A1Q9Y2W3 748 aa17.24■□□□□ 0.35
LINC00116-203ENST00000611969 TDHQ8IZJ6 230 aa17.23■□□□□ 0.35
LINC00116-203ENST00000611969 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
LINC00116-203ENST00000611969 PICK1Q9NRD5 415 aa17.23■□□□□ 0.35
LINC00116-203ENST00000611969 USP40Q9NVE5 1235 aa17.23■□□□□ 0.35
LINC00116-203ENST00000611969 MAST2Q6P0Q8 1798 aa17.23■□□□□ 0.35
LINC00116-203ENST00000611969 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
LINC00116-203ENST00000611969 IFIT1P09914 478 aaKnown RBP17.22■□□□□ 0.35
LINC00116-203ENST00000611969 RGS3P49796 1198 aa17.22■□□□□ 0.35
LINC00116-203ENST00000611969 TREML2Q5T2D2 321 aa17.22■□□□□ 0.35
LINC00116-203ENST00000611969 SH3BP5LQ7L8J4 393 aa17.22■□□□□ 0.35
LINC00116-203ENST00000611969 HMGCRP04035 888 aa17.21■□□□□ 0.35
LINC00116-203ENST00000611969 CAPN2P17655 700 aa17.21■□□□□ 0.35
LINC00116-203ENST00000611969 ANKLE1Q8NAG6 615 aa17.21■□□□□ 0.35
LINC00116-203ENST00000611969 COA7Q96BR5 231 aa17.21■□□□□ 0.35
LINC00116-203ENST00000611969 AGTPBP1Q9UPW5 1226 aa17.21■□□□□ 0.35
LINC00116-203ENST00000611969 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
LINC00116-203ENST00000611969 FAM110CQ1W6H9 321 aa17.2■□□□□ 0.34
LINC00116-203ENST00000611969 NBPF3Q9H094 633 aa17.2■□□□□ 0.34
LINC00116-203ENST00000611969 VCANP13611 3396 aa17.2■□□□□ 0.34
LINC00116-203ENST00000611969 PFASO15067 1338 aa17.2■□□□□ 0.34
LINC00116-203ENST00000611969 DNAH12Q6ZR08 3092 aa17.19■□□□□ 0.34
LINC00116-203ENST00000611969 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
LINC00116-203ENST00000611969 SLC5A1P13866 664 aa17.19■□□□□ 0.34
LINC00116-203ENST00000611969 UBE2OQ9C0C9 1292 aaKnown RBP17.19■□□□□ 0.34
LINC00116-203ENST00000611969 C11orf49Q9H6J7 331 aa17.19■□□□□ 0.34
LINC00116-203ENST00000611969 DDX4Q9NQI0 724 aaKnown RBP17.19■□□□□ 0.34
LINC00116-203ENST00000611969 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
LINC00116-203ENST00000611969 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC00116-203ENST00000611969 TRIB2Q92519 343 aa17.18■□□□□ 0.34
LINC00116-203ENST00000611969 IDI2Q9BXS1 227 aa17.18■□□□□ 0.34
LINC00116-203ENST00000611969 LRRFIP2Q9Y608 721 aaKnown RBP17.18■□□□□ 0.34
LINC00116-203ENST00000611969 SIPA1L1O43166 1804 aa17.18■□□□□ 0.34
LINC00116-203ENST00000611969 LTBP2Q14767 1821 aa17.18■□□□□ 0.34
LINC00116-203ENST00000611969 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 ENTPD3O75355 529 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
LINC00116-203ENST00000611969 MAP3K10Q02779 954 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 ZSCAN29Q8IWY8 852 aaPredicted RBP17.17■□□□□ 0.34
LINC00116-203ENST00000611969 LPIN2Q92539 896 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 GUCD1Q96NT3 240 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 HMX1Q9NP08 348 aaPredicted RBP17.17■□□□□ 0.34
LINC00116-203ENST00000611969 GJD2Q9UKL4 321 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 GAKO14976 1311 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 RPTORQ8N122 1335 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
LINC00116-203ENST00000611969 E9PSI1 815 aa17.16■□□□□ 0.34
LINC00116-203ENST00000611969 OGDHLQ9ULD0 1010 aa17.16■□□□□ 0.34
LINC00116-203ENST00000611969 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
LINC00116-203ENST00000611969 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
LINC00116-203ENST00000611969 EYA2O00167 538 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms